PDB 8H40
ELECTRON MICROSCOPY0 chains30 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
Chain Aview chain
7 domainsChain Bview chain
7 domainsChain Cview chain
2 domainsChain Dview chain
2 domainsChain Eview chain
4 domainsChain Fview chain
1 domainChain Xview chain
2 domainsChain Yview chain
2 domainsAll Domains (30)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | A | e8h40A1 | A:450-586 | RNA_pol_Rpb2_45 | 4042 → 4042.1 → 4042.1.1 |
| 2 | A | e8h40A2 | A:985-1100 | RNA_pol_Rpb2_6,RNA_pol_Rpb2_7 | 4043 → 4043.1 → 4043.1.1 |
| 3 | A | e8h40A3 | A:144-323 | RNA_pol_Rpb2_2 | 4041 → 4041.1 → 4041.1.1 |
| 4 | A | e8h40A4 | A:24-143,A:324-449 | RNA_pol_Rpb2_1,RNA_pol_Rpb2_3 | 4010 → 4010.1 → 4010.1.1 |
| 5 | A | e8h40A5 | A:715-846 | RNA_pol_Rpb2_6 | 325 → 325.1 → 325.1.7 |
| 6 | A | e8h40A6 | A:677-714,A:847-984 | RNA_pol_Rpb2_6 | 1 → 1.1 → 1.1.2 |
| 7 | A | e8h40A7 | A:587-676 | 325.1.7.0 | 325 → 325.1 → 325.1.7 |
| 8 | B | e8h40B1 | B:1-64 | RNA_pol_Rpb1_3 | 4959 → 4959.1 → 4959.1.1 |
| 9 | B | e8h40B2 | B:65-224 | RNA_pol_Rpb1_5,RNA_pol_Rpb1_4 | 4958 → 4958.1 → 4958.1.1 |
| 10 | B | e8h40B3 | B:225-308 | 275.1.1.0 | 275 → 275.1 → 275.1.1 |
| 11 | B | e8h40B4 | B:309-345 | RNA_pol_Rpb1_5 | 4954 → 4954.1 → 4954.1.1 |
| 12 | B | e8h40B5 | B:346-427 | 325.1.7.0 | 325 → 325.1 → 325.1.7 |
| 13 | B | e8h40B6 | B:1002-1086 | 325.1.7.0 | 325 → 325.1 → 325.1.7 |
| 14 | B | e8h40B7 | B:1087-1256 | RNA_pol_Rpb1_5 | 275 → 275.1 → 275.1.1 |
| 15 | C | e8h40C1 | C:3-49,C:172-228 | RNA_pol_L | 305 → 305.1 → 305.1.1 |
| 16 | C | e8h40C2 | C:50-171 | RNA_pol_A_bac | 240 → 240.2 → 240.2.1 |
| 17 | D | e8h40D1 | D:50-171 | RNA_pol_A_bac | 240 → 240.2 → 240.2.1 |
| 18 | D | e8h40D2 | D:3-49,D:172-228 | RNA_pol_L | 305 → 305.1 → 305.1.1 |
| 19 | E | e8h40E1 | E:1-44,E:82-83,E:121-188,E:224-386 | RNA_pol_Rpb1_2, RNA_pol_Rpb1_1 | 4246 → 4246.1 → 4246.1.1 |
| 20 | E | e8h40E2 | E:387-420,E:464-545 | RNA_pol_Rpb1_2, RNA_pol_Rpb1_3 | 1 → 1.1 → 1.1.2 |
| 21 | E | e8h40E3 | E:421-463 | RNA_pol_Rpb1_2 | 1 → 1.1 → 1.1.2 |
| 22 | E | e8h40E4 | E:546-624 | 4959.1.1.0 | 4959 → 4959.1 → 4959.1.1 |
| 23 | F | e8h40F1 | F:13-70 | RNA_pol_Rpb6 | 152 → 152.1 → 152.1.1 |
| 24 | G | e8h40G1 | G:227-283 | Sigma70_r3 | 101 → 101.1 → 101.1.1 |
| 25 | G | e8h40G2 | G:77-226 | Sigma70_r1_2,Sigma70_r2 | 142 → 142.1 → 142.1.1 |
| 26 | G | e8h40G3 | G:255-257,G:284-390 | Sigma70_r3,Sigma70_r4 | 101 → 101.1 → 101.1.1 |
| 27 | X | e8h40X1 | X:144-220 | HTH_Crp_2 | 101 → 101.1 → 101.1.2 |
| 28 | X | e8h40X2 | X:25-143 | cNMP_binding | 10 → 10.12 → 10.12.1 |
| 29 | Y | e8h40Y1 | Y:25-143 | cNMP_binding | 10 → 10.12 → 10.12.1 |
| 30 | Y | e8h40Y2 | Y:144-220 | HTH_Crp_2 | 101 → 101.1 → 101.1.2 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors