PDB 8HYJ
ELECTRON MICROSCOPY0 chains26 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
Loading viewer...
Domains by Chain
Chain Aview chain
5 domainsChain Bview chain
7 domainsChain Cview chain
2 domainsChain Dview chain
1 domainChain Eview chain
2 domainsChain Fview chain
1 domainChain Gview chain
2 domainsChain Hview chain
1 domainChain Iview chain
2 domainsChain Jview chain
1 domainChain Kview chain
1 domainChain Lview chain
1 domainAll Domains (26)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | A | e8hyjA01 | A:56-309,A:371-373,A:535-537,A:729-732 | 4246.1.1.0 | 4246 → 4246.1 → 4246.1.1 |
| 2 | A | e8hyjA02 | A:310-370,A:374-488 | RNA_pol_Rpb1_2 | 1 → 1.1 → 1.1.2 |
| 3 | A | e8hyjA03 | A:489-534,A:538-618,A:624-626 | RNA_pol_Rpb1_3 | 4959 → 4959.1 → 4959.1.1 |
| 4 | A | e8hyjA04 | A:619-623,A:627-728,A:733-813 | 4958.1.1.0 | 4958 → 4958.1 → 4958.1.1 |
| 5 | A | e8hyjA05 | A:1759-1827 | DUF3223 | 3556 → 3556.1 → 3556.1.1 |
| 6 | B | e8hyjB1 | B:763-799,B:909-1042 | RNA_pol_Rpb2_6 | 1 → 1.1 → 1.1.2 |
| 7 | B | e8hyjB2 | B:224-398 | RNA_pol_Rpb2_2 | 4041 → 4041.1 → 4041.1.1 |
| 8 | B | e8hyjB3 | B:800-908 | RNA_pol_Rpb2_6 | 325 → 325.1 → 325.1.7 |
| 9 | B | e8hyjB4 | B:537-624 | RNA_pol_Rpb2_4 | 4961 → 4961.1 → 4961.1.1 |
| 10 | B | e8hyjB5 | B:22-68,B:88-138,B:171-223,B:399-536 | RNA_pol_Rpb2_1,RNA_pol_Rpb2_3 | 4010 → 4010.1 → 4010.1.1 |
| 11 | B | e8hyjB6 | B:1043-1171 | RNA_pol_Rpb2_7 | 4043 → 4043.1 → 4043.1.1 |
| 12 | B | e8hyjB7 | B:625-762 | RNA_pol_Rpb2_6,RNA_pol_Rpb2_5 | 4042 → 4042.1 → 4042.1.1 |
| 13 | C | e8hyjC1 | C:5-45,C:183-205,C:229-300 | RNA_pol_L | 305 → 305.1 → 305.1.1 |
| 14 | C | e8hyjC2 | C:46-182 | RNA_pol_A_bac | 240 → 240.2 → 240.2.1 |
| 15 | D | e8hyjD1 | D:85-201 | RNA_pol_Rpb4 | 102 → 102.1 → 102.1.1 |
| 16 | E | e8hyjE1 | E:151-222 | RNA_pol_Rpb5_C | 840 → 840.1 → 840.1.1 |
| 17 | E | e8hyjE2 | E:14-150 | RNA_pol_Rpb5_N | 2008 → 2008.3 → 2008.3.1 |
| 18 | F | e8hyjF1 | F:59-134 | RNA_pol_Rpb6 | 152 → 152.1 → 152.1.1 |
| 19 | G | e8hyjG01 | G:42-82 | 872.1.1.0 | 872 → 872.1 → 872.1.1 |
| 20 | G | e8hyjG02 | G:83-178 | 2.1.1.0 | 2 → 2.1 → 2.1.1 |
| 21 | H | e8hyjH1 | H:5-146 | RNA_pol_Rpb8 | 2 → 2.1 → 2.1.1 |
| 22 | I | e8hyjI1 | I:50-114 | TFIIS_C | 375 → 375.1 → 375.1.1 |
| 23 | I | e8hyjI2 | I:2-49 | RNA_POL_M_15KD | 375 → 375.1 → 375.1.1 |
| 24 | J | e8hyjJ1 | J:1-62 | RNA_pol_N | 101 → 101.4 → 101.4.1 |
| 25 | K | e8hyjK1 | K:14-113 | RNA_pol_L_2 | 305 → 305.1 → 305.1.1 |
| 26 | L | e8hyjL1 | L:9-50 | DNA_RNApol_7kD | 375 → 375.1 → 375.1.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors