PDB 8I0R
0 chains83 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
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6 domainsChain bview chain
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5 domainsChain dview chain
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12 domainsChain eview chain
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1 domainChain iview chain
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1 domainChain nview chain
1 domainChain Nview chain
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1 domainChain Oview chain
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1 domainChain Qview chain
5 domainsChain Tview chain
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1 domainAll Domains (83)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | 1 | e8i0r11 | 1:463-485,1:487-1304 | PPP2R1A-like_HEAT | 109 → 109.4 → 109.4.1 |
| 2 | 3 | e8i0r31 | 3:404-441,3:773-807,3:848-1132 | CPSF_A | 5 → 5.1 → 5.1.4 |
| 3 | 3 | e8i0r32 | 3:1-403 | MMS1_N | 5 → 5.1 → 5.1.4 |
| 4 | 3 | e8i0r33 | 3:1133-1217 | CPSF_A | 101 → 101.1 → 101.1.1 |
| 5 | 3 | e8i0r34 | 3:442-772 | Beta-prop_RSE1_2nd | 5 → 5.1 → 5.1.4 |
| 6 | 4 | e8i0r41 | 4:12-89 | RRM_1 | 304 → 304.9 → 304.9.1 |
| 7 | 5 | e8i0r51 | 5:15-80 | SF3b10 | 1106 → 1106.1 → 1106.1.1 |
| 8 | 6 | e8i0r61 | 6:12-125 | RRM_1 | 304 → 304.9 → 304.9.1 |
| 9 | 7 | e8i0r71 | 7:7-91 | PHF5 | 377 → 377.1 → 377.1.4 |
| 10 | 8 | e8i0r81 | 8:32-126 | PWI | 592 → 592.1 → 592.1.1 |
| 11 | 9 | e8i0r91 | 9:280-437 | Pro_isomerase | 75 → 75.1 → 75.1.1 |
| 12 | 9 | e8i0r92 | 9:116-159 | 304.9.1.0 | 304 → 304.9 → 304.9.1 |
| 13 | 9 | e8i0r93 | 9:43-93 | 376.1.1.0 | 376 → 376.1 → 376.1.1 |
| 14 | a | e8i0ra1 | a:7-95 | LSM | 4 → 4.1 → 4.1.1 |
| 15 | A | e8i0rA1 | A:26-810 | PRO8NT,PROCN | 1038 → 1038.1 → 1038.1.1 |
| 16 | A | e8i0rA2 | A:811-1182 | RRM_4 | 304 → 304.48 → 304.48.1 |
| 17 | A | e8i0rA3 | A:1183-1502 | U6-snRNA_bdg,U5_2-snRNA_bdg | 4967 → 4967.1 → 4967.1.1 |
| 18 | A | e8i0rA4 | A:1755-2006 | PRP8_domainIV | 2484 → 2484.1 → 2484.1.1 |
| 19 | A | e8i0rA5 | A:1503-1754 | U6-snRNA_bdg | 2008 → 2008.1 → 2008.1.1 |
| 20 | A | e8i0rA6 | A:2067-2314 | JAB,PROCT | 2492 → 2492.1 → 2492.1.1 |
| 21 | b | e8i0rb1 | b:2-81 | LSM | 4 → 4.1 → 4.1.1 |
| 22 | c | e8i0rc1 | c:26-73,c:93-118 | LSM | 4 → 4.1 → 4.1.1 |
| 23 | C | e8i0rC1 | C:829-957 | EFG_C | 304 → 304.24 → 304.24.1 |
| 24 | C | e8i0rC2 | C:581-659 | EFG_III | 304 → 304.24 → 304.24.1 |
| 25 | C | e8i0rC3 | C:660-828 | EFG_IV | 212 → 212.1 → 212.1.1 |
| 26 | C | e8i0rC4 | C:114-439 | GTP_EFTU | 2004 → 2004.1 → 2004.1.1 |
| 27 | C | e8i0rC5 | C:440-580 | GTP_EFTU_D2 | 1 → 1.1 → 1.1.7 |
| 28 | d | e8i0rd1 | d:7-81 | LSM | 4 → 4.1 → 4.1.1 |
| 29 | D | e8i0rD1 | D:1312-1520 | DEAD | 2004 → 2004.1 → 2004.1.1 |
| 30 | D | e8i0rD2 | D:683-886 | Helicase_C | 2004 → 2004.1 → 2004.1.1 |
| 31 | D | e8i0rD3 | D:1825-1957 | Sec63 | 4156 → 4156.1 → 4156.1.1 |
| 32 | D | e8i0rD4 | D:433-682 | DEAD | 2004 → 2004.1 → 2004.1.1 |
| 33 | D | e8i0rD5 | D:2016-2125 | Sec63 | 11 → 11.1 → 11.1.1 |
| 34 | D | e8i0rD6 | D:1723-1824 | SNRNP200_wHTH | 101 → 101.1 → 101.1.2 |
| 35 | D | e8i0rD7 | D:887-993 | SNRNP200_wHTH | 101 → 101.1 → 101.1.2 |
| 36 | D | e8i0rD8 | D:994-1125 | Sec63 | 4156 → 4156.1 → 4156.1.1 |
| 37 | D | e8i0rD9 | D:1958-2015 | 102.5.1.0 | 102 → 102.5 → 102.5.1 |
| 38 | D | e8i0rD10 | D:1521-1722 | Helicase_C | 2004 → 2004.1 → 2004.1.1 |
| 39 | D | e8i0rD11 | D:1181-1311 | Sec63 | 11 → 11.1 → 11.1.1 |
| 40 | D | e8i0rD12 | D:1126-1180 | 102.5.1.0 | 102 → 102.5 → 102.5.1 |
| 41 | e | e8i0re1 | e:18-92 | LSM | 4 → 4.1 → 4.1.1 |
| 42 | E | e8i0rE1 | E:62-355 | WD40, Beta-prop_NOL10_N | 5 → 5.1 → 5.1.4 |
| 43 | f | e8i0rf1 | f:4-76 | LSM | 4 → 4.1 → 4.1.1 |
| 44 | g | e8i0rg1 | g:4-75 | LSM | 4 → 4.1 → 4.1.1 |
| 45 | h | e8i0rh1 | h:26-73,h:93-118 | LSM | 4 → 4.1 → 4.1.1 |
| 46 | i | e8i0ri1 | i:7-81 | LSM | 4 → 4.1 → 4.1.1 |
| 47 | I | e8i0rI1 | I:33-738 | TPR_8, HAT_Syf1_M, HAT_Syf1_CNRKL1_C, HAT_Syf1_CNRKL1_N, HAT_PRP39_N | 109 → 109.4 → 109.4.1 |
| 48 | j | e8i0rj1 | j:18-92 | LSM | 4 → 4.1 → 4.1.1 |
| 49 | J | e8i0rJ1 | J:214-802 | HAT, HAT_Syf1_CNRKL1_C, HAT_Syf1_CNRKL1_N, HAT_PRP39_C, PF29376 | 109 → 109.4 → 109.4.1 |
| 50 | k | e8i0rk1 | k:4-76 | LSM | 4 → 4.1 → 4.1.1 |
| 51 | K | e8i0rK1 | K:191-226 | zf-CCCH | 906 → 906.1 → 906.1.1 |
| 52 | l | e8i0rl1 | l:4-75 | LSM | 4 → 4.1 → 4.1.1 |
| 53 | L | e8i0rL1 | L:8-64 | Myb_DNA-binding | 101 → 101.1 → 101.1.1 |
| 54 | L | e8i0rL2 | L:62-110 | Myb_DNA-binding | 101 → 101.1 → 101.1.1 |
| 55 | m | e8i0rm1 | m:7-95 | LSM | 4 → 4.1 → 4.1.1 |
| 56 | n | e8i0rn1 | n:2-81 | LSM | 4 → 4.1 → 4.1.1 |
| 57 | N | e8i0rN1 | N:3-144 | BUD31 | 3952 → 3952.1 → 3952.1.1 |
| 58 | o | e8i0ro1 | o:2-163 | LRR_9 | 207 → 207.1 → 207.1.1 |
| 59 | O | e8i0rO1 | O:227-308 | RRM_1 | 304 → 304.9 → 304.9.1 |
| 60 | O | e8i0rO2 | O:19-89 | STL11_N | 376 → 376.1 → 376.1.3 |
| 61 | O | e8i0rO3 | O:90-218 | zf-CCCH_RBM22 | 906 → 906.1 → 906.1.1 |
| 62 | p | e8i0rp1 | p:3-96 | RRM_1 | 304 → 304.9 → 304.9.1 |
| 63 | Q | e8i0rQ1 | Q:19-415 | Aquarius_N_1st | 109 → 109.4 → 109.4.1 |
| 64 | Q | e8i0rQ2 | Q:1135-1333 | AAA_12 | 2004 → 2004.1 → 2004.1.1 |
| 65 | Q | e8i0rQ3 | Q:416-492,Q:660-706,Q:795-1134 | ResIII, AAA_11 | 2004 → 2004.1 → 2004.1.1 |
| 66 | Q | e8i0rQ4 | Q:493-659 | Aquarius_N_2nd | 1 → 1.1 → 1.1.7 |
| 67 | Q | e8i0rQ5 | Q:707-753,Q:773-794 | Aquarius_N_3rd | 3940 → 3940.1 → 3940.1.1 |
| 68 | S | e8i0rS1 | S:575-750 | Helicase_C | 2004 → 2004.1 → 2004.1.1 |
| 69 | S | e8i0rS2 | S:386-574 | DEAD | 2004 → 2004.1 → 2004.1.1 |
| 70 | S | e8i0rS3 | S:932-1017 | OB_NTP_bind | 2 → 2.1 → 2.1.1 |
| 71 | S | e8i0rS4 | S:751-931 | HA2_N,HA2_C | 4156 → 4156.1 → 4156.1.1 |
| 72 | T | e8i0rT1 | T:184-496 | WD40 | 5 → 5.1 → 5.1.4 |
| 73 | u | e8i0ru1 | u:160-285 | Surp,PRP21_like_P | 574 → 574.1 → 574.1.1 |
| 74 | v | e8i0rv1 | v:18-35,v:40-86 | zf-met | 386 → 386.1 → 386.1.1 |
| 75 | v | e8i0rv2 | v:87-91,v:114-223 | SF3A2 | 319 → 319.2 → 319.2.1 |
| 76 | V | e8i0rV1 | V:452-647 | MA3 | 109 → 109.4 → 109.4.1 |
| 77 | V | e8i0rV2 | V:149-345,V:450-451 | MIF4G | 109 → 109.4 → 109.4.1 |
| 78 | w | e8i0rw1 | w:2-353 | SF3A3 | 3403 → 3403.1 → 3403.1.1 |
| 79 | X | e8i0rX1 | X:246-367 | FHA | 73 → 73.1 → 73.1.1 |
| 80 | y | e8i0ry1 | y:142-299 | Pro_isomerase | 75 → 75.1 → 75.1.1 |
| 81 | y | e8i0ry2 | y:7-82 | RRM_1 | 304 → 304.9 → 304.9.1 |
| 82 | Y | e8i0rY1 | Y:8-112 | RRM_1 | 304 → 304.9 → 304.9.1 |
| 83 | z | e8i0rz1 | z:2-178 | Pro_isomerase | 75 → 75.1 → 75.1.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors