PDB 8ITY
ELECTRON MICROSCOPY0 chains43 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
Loading viewer...
Domains by Chain
Chain Aview chain
9 domainse8ityA1(A:1-231,A:276-418,A:614-615,A:629-632,A:658-658,A:727-728,A:752-755,A:909-911,A:944-946,A:994-997,A:1009-1011)e8ityA2(A:419-448,A:523-604)e8ityA3(A:449-522)e8ityA4(A:605-613,A:616-628,A:633-657,A:659-726,A:729-751,A:756-772)e8ityA5(A:773-908,A:912-943,A:947-970)e8ityA6(A:971-993,A:998-1008,A:1012-1097)e8ityA7(A:1098-1118)e8ityA8(A:1119-1146)e8ityA9(A:1147-1213,A:1316-1365)
Chain Bview chain
7 domainsChain Cview chain
2 domainsChain Dview chain
1 domainChain Eview chain
2 domainsChain Fview chain
1 domainChain Gview chain
2 domainsChain Hview chain
1 domainChain Iview chain
1 domainChain Jview chain
1 domainChain Kview chain
1 domainChain Lview chain
1 domainChain Mview chain
1 domainChain Nview chain
1 domainChain Oview chain
5 domainsChain Pview chain
2 domainsChain Uview chain
2 domainsChain Vview chain
2 domainsChain Wview chain
1 domainAll Domains (43)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | A | e8ityA1 | A:1-231,A:276-418,A:614-615,A:629-632,A:658-658,A:727-728,A:752-755,A:909-911,A:944-946,A:994-997,A:1009-1011 | RNA_pol_Rpb1_2, RNA_pol_Rpb1_1 | 4246 → 4246.1 → 4246.1.1 |
| 2 | A | e8ityA2 | A:419-448,A:523-604 | RNA_pol_Rpb1_3 | 4959 → 4959.1 → 4959.1.1 |
| 3 | A | e8ityA3 | A:449-522 | RNA_pol_Rpb1_2 | 1 → 1.1 → 1.1.2 |
| 4 | A | e8ityA4 | A:605-613,A:616-628,A:633-657,A:659-726,A:729-751,A:756-772 | RNA_pol_Rpb1_3 | 4959 → 4959.1 → 4959.1.1 |
| 5 | A | e8ityA5 | A:773-908,A:912-943,A:947-970 | RNA_pol_Rpb1_5,RNA_pol_Rpb1_4 | 4958 → 4958.1 → 4958.1.1 |
| 6 | A | e8ityA6 | A:971-993,A:998-1008,A:1012-1097 | RNA_pol_Rpb1_5 | 275 → 275.1 → 275.1.1 |
| 7 | A | e8ityA7 | A:1098-1118 | 4954.1.1.0 | 4954 → 4954.1 → 4954.1.1 |
| 8 | A | e8ityA8 | A:1119-1146 | 4956.1.1.0 | 4956 → 4956.1 → 4956.1.1 |
| 9 | A | e8ityA9 | A:1147-1213,A:1316-1365 | 4955.1.1.0 | 4955 → 4955.1 → 4955.1.1 |
| 10 | B | e8ityB1 | B:185-360 | RNA_pol_Rpb2_2 | 4041 → 4041.1 → 4041.1.1 |
| 11 | B | e8ityB2 | B:499-589 | RNA_pol_Rpb2_4 | 4961 → 4961.1 → 4961.1.1 |
| 12 | B | e8ityB3 | B:730-766,B:892-1014 | RNA_pol_Rpb2_6 | 1 → 1.1 → 1.1.2 |
| 13 | B | e8ityB4 | B:767-891 | RNA_pol_Rpb2_6 | 325 → 325.1 → 325.1.7 |
| 14 | B | e8ityB5 | B:590-729 | RNA_pol_Rpb2_6,RNA_pol_Rpb2_5 | 4042 → 4042.1 → 4042.1.1 |
| 15 | B | e8ityB6 | B:18-184,B:361-498 | RNA_pol_Rpb2_1,RNA_pol_Rpb2_3 | 4010 → 4010.1 → 4010.1.1 |
| 16 | B | e8ityB7 | B:1015-1132 | RNA_pol_Rpb2_6,RNA_pol_Rpb2_7 | 4043 → 4043.1 → 4043.1.1 |
| 17 | C | e8ityC1 | C:2-84,C:228-344 | RNA_pol_L | 305 → 305.1 → 305.1.1 |
| 18 | C | e8ityC2 | C:85-227 | RNA_pol_A_bac | 240 → 240.2 → 240.2.1 |
| 19 | D | e8ityD1 | D:1-122 | RNA_pol_Rpb4 | 102 → 102.1 → 102.1.1 |
| 20 | E | e8ityE1 | E:2-138 | RNA_pol_Rpb5_N | 2008 → 2008.3 → 2008.3.1 |
| 21 | E | e8ityE2 | E:139-210 | RNA_pol_Rpb5_C | 840 → 840.1 → 840.1.1 |
| 22 | F | e8ityF1 | F:51-126 | RNA_pol_Rpb6 | 152 → 152.1 → 152.1.1 |
| 23 | G | e8ityG1 | G:79-162,G:184-201 | RNA_pol_Rbc25 | 2 → 2.1 → 2.1.1 |
| 24 | G | e8ityG2 | G:2-78 | SHS2_Rpb7-N | 872 → 872.1 → 872.1.1 |
| 25 | H | e8ityH1 | H:2-149 | RNA_pol_Rpb8 | 2 → 2.1 → 2.1.1 |
| 26 | I | e8ityI1 | I:1-56 | RNA_POL_M_15KD | 375 → 375.1 → 375.1.1 |
| 27 | J | e8ityJ1 | J:1-65 | RNA_pol_N | 101 → 101.4 → 101.4.1 |
| 28 | K | e8ityK1 | K:24-126 | RNA_pol_L_2 | 305 → 305.1 → 305.1.1 |
| 29 | L | e8ityL1 | L:13-58 | DNA_RNApol_7kD | 375 → 375.1 → 375.1.1 |
| 30 | M | e8ityM1 | M:6-154,M:188-253 | RPC5 | 59 → 59.1 → 59.1.1 |
| 31 | N | e8ityN01 | N:245-396 | RNA_pol_Rpc4 | 59 → 59.1 → 59.1.1 |
| 32 | O | e8ityO1 | O:85-205,O:227-237 | 101.1.2.0 | 101 → 101.1 → 101.1.2 |
| 33 | O | e8ityO2 | O:427-534 | RPC3_helical | 192 → 192.24 → 192.24.1 |
| 34 | O | e8ityO3 | O:238-336 | RNA_pol_Rpc82 | 101 → 101.1 → 101.1.2 |
| 35 | O | e8ityO4 | O:337-426 | POLR3C_WHD | 101 → 101.1 → 101.1.2 |
| 36 | O | e8ityO5 | O:2-84 | HTH_9 | 101 → 101.1 → 101.1.2 |
| 37 | P | e8ityP1 | P:164-316 | RNA_pol_Rpc34 | 101 → 101.1 → 101.1.2 |
| 38 | P | e8ityP2 | P:85-163 | RNA_pol_Rpc34 | 101 → 101.1 → 101.1.2 |
| 39 | U | e8ityU1 | U:256-334 | TBP | 331 → 331.1 → 331.1.1 |
| 40 | U | e8ityU2 | U:159-255 | TBP | 331 → 331.1 → 331.1.1 |
| 41 | V | e8ityV01 | V:1-58 | TF_Zn_Ribbon | 375 → 375.1 → 375.1.1 |
| 42 | V | e8ityV02 | V:119-235 | BRF2-like_C_cyclin_rpt | 101 → 101.1 → 101.1.10 |
| 43 | W | e8ityW1 | W:274-384 | Myb_DNA-bind_7 | 101 → 101.1 → 101.1.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors