PDB 8JCH
ELECTRON MICROSCOPY0 chains40 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
Chain Aview chain
9 domainsChain Bview chain
7 domainsChain Cview chain
2 domainsChain Dview chain
1 domainChain Eview chain
2 domainsChain Fview chain
1 domainChain Gview chain
2 domainsChain Hview chain
1 domainChain Iview chain
2 domainsChain Jview chain
1 domainChain Kview chain
1 domainChain Lview chain
1 domainChain Mview chain
2 domainsChain Oview chain
1 domainAll Domains (40)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | A | e8jchA1 | A:1060-1102,A:1301-1445 | RNA_pol_Rpb1_5 | 4954 → 4954.1 → 4954.1.1 |
| 2 | A | e8jchA2 | A:375-435 | RNA_pol_Rpb1_2 | 275 → 275.1 → 275.1.1 |
| 3 | A | e8jchA3 | A:663-871 | RNA_pol_Rpb1_5,RNA_pol_Rpb1_4 | 4958 → 4958.1 → 4958.1.1 |
| 4 | A | e8jchA4 | A:2-336 | RNA_pol_Rpb1_1 | 4246 → 4246.1 → 4246.1.1 |
| 5 | A | e8jchA5 | A:337-374,A:436-519 | RNA_pol_Rpb1_2 | 1 → 1.1 → 1.1.2 |
| 6 | A | e8jchA6 | A:1103-1131,A:1243-1300 | 4956.1.1.0 | 4956 → 4956.1 → 4956.1.1 |
| 7 | A | e8jchA7 | A:872-1059 | RNA_pol_Rpb1_6 | 4957 → 4957.1 → 4957.1.1 |
| 8 | A | e8jchA8 | A:1132-1242 | RNA_pol_Rpb1_7 | 4955 → 4955.1 → 4955.1.1 |
| 9 | A | e8jchA9 | A:520-662 | RNA_pol_Rpb1_3 | 4959 → 4959.1 → 4959.1.1 |
| 10 | B | e8jchB01 | B:79-220,B:244-248,B:412-548,B:677-691,B:695-702,B:712-734,B:881-889,B:910-916,B:934-943 | RNA_pol_Rpb2_1,RNA_pol_Rpb2_3 | 4010 → 4010.1 → 4010.1.1 |
| 11 | B | e8jchB02 | B:221-243,B:249-411 | RNA_pol_Rpb2_2 | 4041 → 4041.1 → 4041.1.1 |
| 12 | B | e8jchB03 | B:549-649 | RNA_pol_Rpb2_4 | 4961 → 4961.1 → 4961.1.1 |
| 13 | B | e8jchB04 | B:650-676,B:692-694,B:703-711,B:735-820 | RNA_pol_Rpb2_6 | 1 → 1.1 → 1.1.2 |
| 14 | B | e8jchB05 | B:821-857,B:982-1106 | RNA_pol_Rpb2_6 | 1 → 1.1 → 1.1.2 |
| 15 | B | e8jchB06 | B:858-880,B:890-909,B:917-933,B:944-981 | RNA_pol_Rpb2_6 | 1 → 1.1 → 1.1.2 |
| 16 | B | e8jchB07 | B:1107-1167 | RNA_pol_Rpb2_7 | 4043 → 4043.1 → 4043.1.1 |
| 17 | C | e8jchC1 | C:3-41,C:173-268 | RNA_pol_L | 305 → 305.1 → 305.1.1 |
| 18 | C | e8jchC2 | C:42-172 | RNA_pol_A_bac | 240 → 240.2 → 240.2.1 |
| 19 | D | e8jchD1 | D:10-24,D:140-221 | RNA_pol_Rpb4 | 102 → 102.1 → 102.1.1 |
| 20 | E | e8jchE1 | E:144-215 | RNA_pol_Rpb5_C | 840 → 840.1 → 840.1.1 |
| 21 | E | e8jchE2 | E:5-143 | RNA_pol_Rpb5_N | 2008 → 2008.3 → 2008.3.1 |
| 22 | F | e8jchF1 | F:72-155 | RNA_pol_Rpb6 | 152 → 152.1 → 152.1.1 |
| 23 | G | e8jchG1 | G:81-169 | S1 | 2 → 2.1 → 2.1.1 |
| 24 | G | e8jchG2 | G:1-80 | SHS2_Rpb7-N | 872 → 872.1 → 872.1.1 |
| 25 | H | e8jchH1 | H:2-146 | RNA_pol_Rpb8 | 2 → 2.1 → 2.1.1 |
| 26 | I | e8jchI1 | I:1-49 | RNA_POL_M_15KD | 375 → 375.1 → 375.1.1 |
| 27 | I | e8jchI2 | I:50-121 | TFIIS_C | 375 → 375.1 → 375.1.1 |
| 28 | J | e8jchJ1 | J:1-65 | RNA_pol_N | 101 → 101.4 → 101.4.1 |
| 29 | K | e8jchK1 | K:1-114 | RNA_pol_L_2 | 305 → 305.1 → 305.1.1 |
| 30 | L | e8jchL1 | L:25-70 | DNA_RNApol_7kD | 375 → 375.1 → 375.1.1 |
| 31 | M | e8jchM01 | M:-12-293 | XRN_N | 2006 → 2006.1 → 2006.1.4 |
| 32 | M | e8jchM02 | M:294-404,M:597-767 | XRN_M | 3279 → 3279.1 → 3279.1.1 |
| 33 | O | e8jchO01 | O:1-386 | RAI1 | 2008 → 2008.1 → 2008.1.1 |
| 34 | W | e8jchW01 | W:287-378 | Spt5-NGN | 304 → 304.17 → 304.17.1 |
| 35 | W | e8jchW02 | W:379-508 | KOW, KOW1_SPT5 | 4 → 4.1 → 4.1.1 |
| 36 | W | e8jchW03 | W:534-583 | KOW2_Spt5 | 4 → 4.1 → 4.1.1 |
| 37 | W | e8jchW04 | W:584-640 | KOW | 4 → 4.1 → 4.1.1 |
| 38 | W | e8jchW05 | W:641-689,W:694-695 | KOWx_SPT5 | 4 → 4.1 → 4.1.1 |
| 39 | W | e8jchW06 | W:690-693,W:696-746 | KOW4_SPT5 | 4 → 4.1 → 4.1.1 |
| 40 | W | e8jchW07 | W:814-840 | KOW5_SPT5 | 4 → 4.1 → 4.1.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors