PDB 8JDJ
ELECTRON MICROSCOPY0 chains86 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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2 domainsChain 1view chain
3 domainsChain 2view chain
1 domainChain 3view chain
1 domainChain 4view chain
2 domainsChain 5view chain
1 domainChain 6view chain
1 domainChain 7view chain
1 domainChain 8view chain
1 domainChain 9view chain
2 domainsChain aview chain
1 domainChain AAview chain
1 domainChain ABview chain
1 domainChain ACview chain
1 domainChain ADview chain
1 domainChain AEview chain
1 domainChain AFview chain
1 domainChain AGview chain
1 domainChain AHview chain
1 domainChain AIview chain
2 domainsChain AJview chain
1 domainChain AKview chain
1 domainChain ALview chain
1 domainChain AMview chain
1 domainChain ANview chain
1 domainChain AOview chain
1 domainChain APview chain
1 domainChain AQview chain
1 domainChain ARview chain
1 domainChain bview chain
1 domainChain cview chain
1 domainChain dview chain
1 domainChain eview chain
1 domainChain fview chain
1 domainChain gview chain
1 domainChain Gview chain
2 domainsChain hview chain
1 domainChain Hview chain
1 domainChain iview chain
1 domainChain Iview chain
2 domainsChain jview chain
1 domainChain Jview chain
1 domainChain kview chain
1 domainChain Kview chain
1 domainChain lview chain
1 domainChain Lview chain
1 domainChain mview chain
1 domainChain Mview chain
1 domainChain nview chain
1 domainChain Nview chain
2 domainsChain oview chain
1 domainChain Oview chain
1 domainChain pview chain
1 domainChain Pview chain
1 domainChain qview chain
1 domainChain Qview chain
1 domainChain rview chain
1 domainChain Rview chain
1 domainChain Sview chain
1 domainChain tview chain
1 domainChain Tview chain
1 domainChain uview chain
1 domainChain Uview chain
1 domainChain vview chain
1 domainChain Vview chain
1 domainChain Wview chain
2 domainsChain xview chain
1 domainChain Xview chain
2 domainsChain yview chain
2 domainsChain Yview chain
1 domainChain zview chain
3 domainsChain Zview chain
1 domainAll Domains (86)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | 0 | e8jdj01 | 0:92-227 | Ribosomal_S3_C | 230 → 230.2 → 230.2.1 |
| 2 | 0 | e8jdj02 | 0:1-99 | KH_2 | 327 → 327.11 → 327.11.1 |
| 3 | 1 | e8jdj11 | 1:2-116 | Ribosomal_S4e,S4,RS4NT | 221 → 221.1 → 221.1.2 |
| 4 | 1 | e8jdj12 | 1:176-263 | KOW,40S_S4_C | 4 → 4.1 → 4.1.1 |
| 5 | 1 | e8jdj13 | 1:117-175 | Ribosomal_S4e | 2 → 2.1 → 2.1.1 |
| 6 | 2 | e8jdj21 | 2:14-204 | Ribosomal_S7 | 167 → 167.1 → 167.1.1 |
| 7 | 3 | e8jdj31 | 3:1-237 | Ribosomal_S6e | 239 → 239.1 → 239.1.1 |
| 8 | 4 | e8jdj41 | 4:108-193 | Ribosomal_S7e | 327 → 327.18 → 327.18.1 |
| 9 | 4 | e8jdj42 | 4:5-107 | Ribosomal_S7e | 327 → 327.18 → 327.18.1 |
| 10 | 5 | e8jdj51 | 5:2-207 | Ribosomal_S8e | 3174 → 3174.1 → 3174.1.1 |
| 11 | 6 | e8jdj61 | 6:2-186 | Ribosomal_S4,S4 | 221 → 221.1 → 221.1.2 |
| 12 | 7 | e8jdj71 | 7:2-95 | S10_plectin | 101 → 101.1 → 101.1.2 |
| 13 | 8 | e8jdj81 | 8:2-153 | Ribosomal_S17,Ribosomal_S17_N | 2 → 2.1 → 2.1.1 |
| 14 | 9 | e8jdj91 | 9:83-151 | Ribosomal_S15 | 616 → 616.1 → 616.1.1 |
| 15 | 9 | e8jdj92 | 9:2-82 | Ribosomal_S13_N | 101 → 101.40 → 101.40.1 |
| 16 | a | e8jdja1 | a:10-140 | Ribosomal_L14 | 3174 → 3174.1 → 3174.1.1 |
| 17 | AA | e8jdjAA1 | AA:16-151 | Ribosomal_S11 | 2484 → 2484.1 → 2484.1.1 |
| 18 | AB | e8jdjAB1 | AB:4-99 | Ribosomal_S19 | 838 → 838.1 → 838.1.1 |
| 19 | AC | e8jdjAC1 | AC:6-146 | Ribosomal_S9 | 212 → 212.1 → 212.1.1 |
| 20 | AD | e8jdjAD1 | AD:2-122 | Ribosomal_S17e | 101 → 101.1 → 101.1.17 |
| 21 | AE | e8jdjAE1 | AE:6-142 | Ribosomal_S13 | 102 → 102.2 → 102.2.1 |
| 22 | AF | e8jdjAF1 | AF:4-144 | Ribosomal_S19e | 101 → 101.1 → 101.1.2 |
| 23 | AG | e8jdjAG1 | AG:18-118 | Ribosomal_S10 | 304 → 304.44 → 304.44.1 |
| 24 | AH | e8jdjAH1 | AH:1-82 | Ribosomal_S21e | 3167 → 3167.1 → 3167.1.1 |
| 25 | AI | e8jdjAI1 | AI:68-130 | Ribosomal_S8 | 4988 → 4988.1 → 4988.1.1 |
| 26 | AI | e8jdjAI2 | AI:2-67 | Ribosomal_S8 | 320 → 320.2 → 320.2.1 |
| 27 | AJ | e8jdjAJ1 | AJ:7-140 | Ribosom_S12_S23 | 2 → 2.1 → 2.1.1 |
| 28 | AK | e8jdjAK1 | AK:4-125 | Ribosomal_S24e | 304 → 304.109 → 304.109.1 |
| 29 | AL | e8jdjAL1 | AL:41-115 | Ribosomal_S25 | 101 → 101.1 → 101.1.2 |
| 30 | AM | e8jdjAM1 | AM:2-99 | Ribosomal_S26e | 377 → 377.1 → 377.1.1 |
| 31 | AN | e8jdjAN1 | AN:2-84 | Ribosomal_S27e | 375 → 375.1 → 375.1.1 |
| 32 | AO | e8jdjAO1 | AO:5-68 | Ribosomal_S28e | 2 → 2.1 → 2.1.1 |
| 33 | AP | e8jdjAP1 | AP:4-56 | Ribosomal_S14 | 377 → 377.1 → 377.1.1 |
| 34 | AQ | e8jdjAQ1 | AQ:6-56 | Ribosomal_S30 | 3168 → 3168.1 → 3168.1.1 |
| 35 | AR | e8jdjAR1 | AR:2-314 | WD40 | 5 → 5.1 → 5.1.4 |
| 36 | b | e8jdjb1 | b:1-63 | Ribosomal_L24e | 377 → 377.1 → 377.1.1 |
| 37 | c | e8jdjc1 | c:38-156 | Ribosomal_L23,Ribosomal_L23eN | 304 → 304.109 → 304.109.1 |
| 38 | d | e8jdjd1 | d:1-134 | KOW, Ribosomal_L26 | 4 → 4.1 → 4.1.1 |
| 39 | e | e8jdje1 | e:2-136 | KOW,Ribosomal_L27e | 4 → 4.1 → 4.1.1 |
| 40 | f | e8jdjf1 | f:2-148 | Ribosomal_L27A | 2490 → 2490.3 → 2490.3.1 |
| 41 | g | e8jdjg1 | g:2-50 | Ribosomal_L29e | 3212 → 3212.1 → 3212.1.1 |
| 42 | G | e8jdjG1 | G:2-96 | Ribosomal_L2 | 2 → 2.1 → 2.1.1 |
| 43 | G | e8jdjG2 | G:97-245 | Ribosomal_L2_C | 4 → 4.1 → 4.1.1 |
| 44 | h | e8jdjh1 | h:13-106 | Ribosomal_L7Ae | 301 → 301.1 → 301.1.1 |
| 45 | H | e8jdjH1 | H:2-375 | Ribosomal_L3 | 1 → 1.1 → 1.1.7 |
| 46 | i | e8jdji1 | i:18-124 | Ribosomal_L31e | 259 → 259.1 → 259.1.1 |
| 47 | I | e8jdjI1 | I:3-297 | Ribosomal_L4 | 7559 → 7559.1 → 7559.1.1 |
| 48 | I | e8jdjI2 | I:298-366 | Ribos_L4_asso_C | 3319 → 3319.1 → 3319.1.1 |
| 49 | j | e8jdjj1 | j:2-129 | Ribosomal_L32e | 2490 → 2490.1 → 2490.1.1 |
| 50 | J | e8jdjJ1 | J:8-297 | Ribosomal_L18_c,Ribosomal_L5e | 2484 → 2484.1 → 2484.1.1 |
| 51 | k | e8jdjk1 | k:2-110 | Ribosomal_L35Ae | 1 → 1.1 → 1.1.7 |
| 52 | K | e8jdjK1 | K:131-288 | Ribosomal_L6e | 4 → 4.1 → 4.1.1 |
| 53 | l | e8jdjl1 | l:3-103 | Ribosomal_L34e | 377 → 377.12 → 377.12.1 |
| 54 | L | e8jdjL1 | L:15-248 | Ribosomal_L30,Ribosomal_L30_N | 887 → 887.1 → 887.1.1 |
| 55 | m | e8jdjm1 | m:2-123 | Ribosomal_L29 | 192 → 192.4 → 192.4.1 |
| 56 | M | e8jdjM1 | M:29-263 | Ribosomal_L7Ae | 301 → 301.1 → 301.1.1 |
| 57 | n | e8jdjn1 | n:2-103 | Ribosomal_L36e | 3166 → 3166.1 → 3166.1.1 |
| 58 | N | e8jdjN1 | N:1-87 | Ribosomal_L6 | 318 → 318.1 → 318.1.1 |
| 59 | N | e8jdjN2 | N:88-190 | Ribosomal_L6 | 318 → 318.1 → 318.1.1 |
| 60 | o | e8jdjo1 | o:2-86 | Ribosomal_L37e | 375 → 375.1 → 375.1.1 |
| 61 | O | e8jdjO1 | O:2-214 | Ribosomal_L16 | 325 → 325.1 → 325.1.5 |
| 62 | p | e8jdjp1 | p:2-61 | Ribosomal_L38e | 896 → 896.1 → 896.1.1 |
| 63 | P | e8jdjP1 | P:9-178 | Ribosomal_L5,Ribosomal_L5_C | 882 → 882.1 → 882.1.1 |
| 64 | q | e8jdjq1 | q:2-51 | Ribosomal_L39 | 585 → 585.1 → 585.1.1 |
| 65 | Q | e8jdjQ1 | Q:16-193 | Ribosomal_L13e | 3210 → 3210.1 → 3210.1.1 |
| 66 | r | e8jdjr1 | r:77-128 | Ribosomal_L40e | 375 → 375.1 → 375.1.1 |
| 67 | R | e8jdjR1 | R:2-141 | KOW,Ribosomal_L14e | 4 → 4.1 → 4.1.1 |
| 68 | S | e8jdjS1 | S:2-204 | Ribosomal_L15e | 304 → 304.109 → 304.109.1 |
| 69 | t | e8jdjt1 | t:2-105 | Ribosomal_L44 | 375 → 375.1 → 375.1.1 |
| 70 | T | e8jdjT1 | T:5-200 | Ribosomal_L13 | 2490 → 2490.2 → 2490.2.1 |
| 71 | u | e8jdju1 | u:2-92 | Ribosomal_L37ae | 375 → 375.1 → 375.1.1 |
| 72 | U | e8jdjU1 | U:2-154 | Ribosomal_L22 | 218 → 218.2 → 218.2.1 |
| 73 | v | e8jdjv1 | v:2-131 | Ribosomal_L28e | 3209 → 3209.1 → 3209.1.1 |
| 74 | V | e8jdjV1 | V:5-188 | Ribosomal_L18 | 2490 → 2490.3 → 2490.3.1 |
| 75 | W | e8jdjW1 | W:1-56 | Ribosomal_L19e | 637 → 637.1 → 637.1.1 |
| 76 | W | e8jdjW2 | W:57-183 | Ribosomal_L19e_C | 3050 → 3050.1 → 3050.1.1 |
| 77 | x | e8jdjx1 | x:2-219 | Ribosomal_S2 | 2007 → 2007.6 → 2007.6.1 |
| 78 | X | e8jdjX1 | X:73-176 | Ribosomal_L18A | 3115 → 3115.1 → 3115.1.1 |
| 79 | X | e8jdjX2 | X:4-72 | 3115.1.1.0 | 3115 → 3115.1 → 3115.1.1 |
| 80 | y | e8jdjy1 | y:21-113 | Ribosomal_S3Ae | 239 → 239.5 → 239.5.1 |
| 81 | y | e8jdjy2 | y:114-233 | Ribosomal_S3Ae | 230 → 230.6 → 230.6.1 |
| 82 | Y | e8jdjY1 | Y:2-160 | Ribosomal_L21e | 4 → 4.1 → 4.1.1 |
| 83 | z | e8jdjz1 | z:57-134 | Ribosomal_S5 | 3274 → 3274.1 → 3274.1.1 |
| 84 | z | e8jdjz2 | z:202-278 | Ribosomal_S5_C | 212 → 212.1 → 212.1.1 |
| 85 | z | e8jdjz3 | z:135-201 | Ribosomal_S5 | 330 → 330.1 → 330.1.1 |
| 86 | Z | e8jdjZ1 | Z:16-117 | Ribosomal_L22e | 3715 → 3715.1 → 3715.1.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors