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PDB 8K5P

ELECTRON MICROSCOPY0 chains40 ECOD domains
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3D Structure(domains colored, ligands/nucleic acids shown)

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All Domains (40)

#ChainDomain IDRangeFamilyClassification
1Ae8k5pA1A:1060-1102,A:1301-1445RNA_pol_Rpb1_54954 → 4954.1 → 4954.1.1
2Ae8k5pA2A:375-435RNA_pol_Rpb1_2275 → 275.1 → 275.1.1
3Ae8k5pA3A:663-871RNA_pol_Rpb1_5,RNA_pol_Rpb1_44958 → 4958.1 → 4958.1.1
4Ae8k5pA4A:2-336RNA_pol_Rpb1_14246 → 4246.1 → 4246.1.1
5Ae8k5pA5A:337-374,A:436-519RNA_pol_Rpb1_21 → 1.1 → 1.1.2
6Ae8k5pA6A:1103-1131,A:1243-13004956.1.1.04956 → 4956.1 → 4956.1.1
7Ae8k5pA7A:872-1059RNA_pol_Rpb1_64957 → 4957.1 → 4957.1.1
8Ae8k5pA8A:1132-1242RNA_pol_Rpb1_74955 → 4955.1 → 4955.1.1
9Ae8k5pA9A:520-662RNA_pol_Rpb1_34959 → 4959.1 → 4959.1.1
10Be8k5pB1B:79-220,B:244-248,B:412-548,B:677-691,B:695-702,B:712-734,B:881-889,B:910-916,B:934-943RNA_pol_Rpb2_1,RNA_pol_Rpb2_34010 → 4010.1 → 4010.1.1
11Be8k5pB2B:221-243,B:249-411RNA_pol_Rpb2_24041 → 4041.1 → 4041.1.1
12Be8k5pB3B:549-649RNA_pol_Rpb2_44961 → 4961.1 → 4961.1.1
13Be8k5pB4B:650-676,B:692-694,B:703-711,B:735-820RNA_pol_Rpb2_61 → 1.1 → 1.1.2
14Be8k5pB5B:821-857,B:982-1106RNA_pol_Rpb2_61 → 1.1 → 1.1.2
15Be8k5pB6B:858-880,B:890-909,B:917-933,B:944-981RNA_pol_Rpb2_61 → 1.1 → 1.1.2
16Be8k5pB7B:1107-1167RNA_pol_Rpb2_74043 → 4043.1 → 4043.1.1
17Ce8k5pC1C:3-41,C:173-268RNA_pol_L305 → 305.1 → 305.1.1
18Ce8k5pC2C:42-172RNA_pol_A_bac240 → 240.2 → 240.2.1
19De8k5pD1D:10-24,D:140-221RNA_pol_Rpb4102 → 102.1 → 102.1.1
20Ee8k5pE1E:144-215RNA_pol_Rpb5_C840 → 840.1 → 840.1.1
21Ee8k5pE2E:5-143RNA_pol_Rpb5_N2008 → 2008.3 → 2008.3.1
22Fe8k5pF1F:72-155RNA_pol_Rpb6152 → 152.1 → 152.1.1
23Ge8k5pG1G:81-169S12 → 2.1 → 2.1.1
24Ge8k5pG2G:1-80SHS2_Rpb7-N872 → 872.1 → 872.1.1
25He8k5pH1H:2-146RNA_pol_Rpb82 → 2.1 → 2.1.1
26Ie8k5pI1I:1-49RNA_POL_M_15KD375 → 375.1 → 375.1.1
27Ie8k5pI2I:50-121TFIIS_C375 → 375.1 → 375.1.1
28Je8k5pJ1J:1-65RNA_pol_N101 → 101.4 → 101.4.1
29Ke8k5pK1K:1-114RNA_pol_L_2305 → 305.1 → 305.1.1
30Le8k5pL1L:25-70DNA_RNApol_7kD375 → 375.1 → 375.1.1
31Me8k5pM1M:1-306XRN_N2006 → 2006.1 → 2006.1.4
32Me8k5pM2M:307-417,M:610-780XRN_M3279 → 3279.1 → 3279.1.1
33Oe8k5pO1O:1-386RAI12008 → 2008.1 → 2008.1.1
34We8k5pW01W:287-378Spt5-NGN304 → 304.17 → 304.17.1
35We8k5pW02W:379-508KOW, KOW1_SPT54 → 4.1 → 4.1.1
36We8k5pW03W:534-583KOW2_Spt54 → 4.1 → 4.1.1
37We8k5pW04W:584-640KOW4 → 4.1 → 4.1.1
38We8k5pW05W:641-689,W:694-695KOWx_SPT54 → 4.1 → 4.1.1
39We8k5pW06W:690-693,W:696-746KOW4_SPT54 → 4.1 → 4.1.1
40We8k5pW07W:814-840KOW5_SPT54 → 4.1 → 4.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors