PDB 8OF0
ELECTRON MICROSCOPY0 chains39 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
Chain Aview chain
9 domainsChain Bview chain
7 domainsChain Cview chain
2 domainsChain Dview chain
1 domainChain Eview chain
2 domainsChain Fview chain
1 domainChain Gview chain
2 domainsChain Hview chain
1 domainChain Iview chain
2 domainsChain Jview chain
1 domainChain Kview chain
1 domainChain Lview chain
1 domainChain Oview chain
1 domainChain Qview chain
1 domainAll Domains (39)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | A | e8of0A1 | A:895-1082 | RNA_pol_Rpb1_6 | 4957 → 4957.1 → 4957.1.1 |
| 2 | A | e8of0A2 | A:686-894 | RNA_pol_Rpb1_5,RNA_pol_Rpb1_4 | 4958 → 4958.1 → 4958.1.1 |
| 3 | A | e8of0A3 | A:1136-1164,A:1298-1360 | RNA_pol_Rpb1_5 | 4956 → 4956.1 → 4956.1.1 |
| 4 | A | e8of0A4 | A:389-449 | RNA_pol_Rpb1_2 | 275 → 275.1 → 275.1.1 |
| 5 | A | e8of0A5 | A:10-156,A:182-350 | RNA_pol_Rpb1_1 | 4246 → 4246.1 → 4246.1.1 |
| 6 | A | e8of0A6 | A:1083-1135,A:1361-1485 | RNA_pol_Rpb1_5 | 4954 → 4954.1 → 4954.1.1 |
| 7 | A | e8of0A7 | A:1165-1297 | RNA_pol_Rpb1_7 | 4955 → 4955.1 → 4955.1.1 |
| 8 | A | e8of0A8 | A:534-685 | RNA_pol_Rpb1_3 | 4959 → 4959.1 → 4959.1.1 |
| 9 | A | e8of0A9 | A:351-388,A:450-533 | RNA_pol_Rpb1_2 | 1 → 1.1 → 1.1.2 |
| 10 | B | e8of0B1 | B:92-144,B:164-277,B:469-605 | RNA_pol_Rpb2_1,RNA_pol_Rpb2_3 | 4010 → 4010.1 → 4010.1.1 |
| 11 | B | e8of0B2 | B:278-468 | RNA_pol_Rpb2_2 | 4041 → 4041.1 → 4041.1.1 |
| 12 | B | e8of0B3 | B:883-1006 | RNA_pol_Rpb2_6 | 325 → 325.1 → 325.1.7 |
| 13 | B | e8of0B4 | B:846-882,B:1007-1130 | RNA_pol_Rpb2_6 | 1 → 1.1 → 1.1.2 |
| 14 | B | e8of0B5 | B:696-845 | RNA_pol_Rpb2_6,RNA_pol_Rpb2_5 | 4042 → 4042.1 → 4042.1.1 |
| 15 | B | e8of0B6 | B:1131-1251 | RNA_pol_Rpb2_6,RNA_pol_Rpb2_7 | 4043 → 4043.1 → 4043.1.1 |
| 16 | B | e8of0B7 | B:606-695 | RNA_pol_Rpb2_4 | 4961 → 4961.1 → 4961.1.1 |
| 17 | C | e8of0C1 | C:43-178 | RNA_pol_A_bac | 240 → 240.2 → 240.2.1 |
| 18 | C | e8of0C2 | C:2-42,C:179-270 | RNA_pol_L | 305 → 305.1 → 305.1.1 |
| 19 | D | e8of0D1 | D:60-180 | RNA_pol_Rpb4 | 102 → 102.1 → 102.1.1 |
| 20 | E | e8of0E1 | E:2-138 | RNA_pol_Rpb5_N | 2008 → 2008.3 → 2008.3.1 |
| 21 | E | e8of0E2 | E:139-210 | RNA_pol_Rpb5_C | 840 → 840.1 → 840.1.1 |
| 22 | F | e8of0F1 | F:50-127 | RNA_pol_Rpb6 | 152 → 152.1 → 152.1.1 |
| 23 | G | e8of0G1 | G:78-171 | S1 | 2 → 2.1 → 2.1.1 |
| 24 | G | e8of0G2 | G:1-77 | SHS2_Rpb7-N | 872 → 872.1 → 872.1.1 |
| 25 | H | e8of0H1 | H:2-149 | RNA_pol_Rpb8 | 2 → 2.1 → 2.1.1 |
| 26 | I | e8of0I1 | I:60-125 | TFIIS_C | 375 → 375.1 → 375.1.1 |
| 27 | I | e8of0I2 | I:10-59 | RNA_POL_M_15KD | 375 → 375.1 → 375.1.1 |
| 28 | J | e8of0J1 | J:1-66 | RNA_pol_N | 101 → 101.4 → 101.4.1 |
| 29 | K | e8of0K1 | K:1-115 | RNA_pol_L_2 | 305 → 305.1 → 305.1.1 |
| 30 | L | e8of0L1 | L:15-58 | DNA_RNApol_7kD | 375 → 375.1 → 375.1.1 |
| 31 | O | e8of0O1 | O:12-112 | Skp1_POZ | 226 → 226.1 → 226.1.1 |
| 32 | Q | e8of0Q1 | Q:1-88 | ubiquitin | 221 → 221.1 → 221.1.1 |
| 33 | S | e8of0S1 | S:405-475 | 632.13.1.0 | 632 → 632.13 → 632.13.1 |
| 34 | S | e8of0S2 | S:1043-1144 | HHH_9 | 102 → 102.1 → 102.1.1 |
| 35 | S | e8of0S3 | S:945-1042 | HHH_7 | 102 → 102.1 → 102.1.1 |
| 36 | S | e8of0S4 | S:778-944 | YqgF | 2484 → 2484.1 → 2484.1.1 |
| 37 | S | e8of0S5 | S:284-404 | HTH_44 | 101 → 101.26 → 101.26.1 |
| 38 | S | e8of0S6 | S:476-484,S:515-756 | Tex_central_region | 4342 → 4342.1 → 4342.1.1 |
| 39 | S | e8of0S7 | S:1145-1175,S:1226-1282 | Spt6_S1 | 2 → 2.1 → 2.1.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors