ECODEvolutionary Classification of Protein Domains

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PDB 8OPM

ELECTRON MICROSCOPY0 chains12 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain Aview chain

4 domains

e8opmA1(A:612-775)e8opmA2(A:776-1223)e8opmA3(A:307-611)e8opmA4(A:14-306)

Chain Bview chain

4 domains

e8opmB1(B:612-775)e8opmB2(B:776-1223)e8opmB3(B:307-611)e8opmB4(B:14-306)

Chain Cview chain

4 domains

e8opmC1(C:776-1223)e8opmC2(C:307-611)e8opmC3(C:14-306)e8opmC4(C:612-775)

All Domains (12)

#	Chain	Domain ID	Range	Family	Classification
1	A	e8opmA1	A:612-775	CoV_S1_C	1043 → 1043.1 → 1043.1.1
2	A	e8opmA2	A:776-1223	CoV_S2	1042 → 1042.1 → 1042.1.1
3	A	e8opmA3	A:307-611	bCoV_S1_RBD	4169 → 4169.1 → 4169.1.1
4	A	e8opmA4	A:14-306	bCoV_S1_N	10 → 10.1 → 10.1.1
5	B	e8opmB1	B:612-775	CoV_S1_C	1043 → 1043.1 → 1043.1.1
6	B	e8opmB2	B:776-1223	CoV_S2	1042 → 1042.1 → 1042.1.1
7	B	e8opmB3	B:307-611	bCoV_S1_RBD	4169 → 4169.1 → 4169.1.1
8	B	e8opmB4	B:14-306	bCoV_S1_N	10 → 10.1 → 10.1.1
9	C	e8opmC1	C:776-1223	CoV_S2	1042 → 1042.1 → 1042.1.1
10	C	e8opmC2	C:307-611	bCoV_S1_RBD	4169 → 4169.1 → 4169.1.1
11	C	e8opmC3	C:14-306	bCoV_S1_N	10 → 10.1 → 10.1.1
12	C	e8opmC4	C:612-775	CoV_S1_C	1043 → 1043.1 → 1043.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors