ECODEvolutionary Classification of Protein Domains

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PDB 8OPN

ELECTRON MICROSCOPY0 chains12 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain Aview chain

4 domains

e8opnA1(A:612-775)e8opnA2(A:776-1222)e8opnA3(A:14-306)e8opnA4(A:307-611)

Chain Bview chain

4 domains

e8opnB1(B:776-1224)e8opnB2(B:307-611)e8opnB3(B:14-306)e8opnB4(B:612-775)

Chain Cview chain

4 domains

e8opnC1(C:14-306)e8opnC2(C:776-1223)e8opnC3(C:612-775)e8opnC4(C:307-611)

All Domains (12)

#	Chain	Domain ID	Range	Family	Classification
1	A	e8opnA1	A:612-775	CoV_S1_C	1043 → 1043.1 → 1043.1.1
2	A	e8opnA2	A:776-1222	CoV_S2	1042 → 1042.1 → 1042.1.1
3	A	e8opnA3	A:14-306	bCoV_S1_N	10 → 10.1 → 10.1.1
4	A	e8opnA4	A:307-611	bCoV_S1_RBD	4169 → 4169.1 → 4169.1.1
5	B	e8opnB1	B:776-1224	CoV_S2	1042 → 1042.1 → 1042.1.1
6	B	e8opnB2	B:307-611	bCoV_S1_RBD	4169 → 4169.1 → 4169.1.1
7	B	e8opnB3	B:14-306	bCoV_S1_N	10 → 10.1 → 10.1.1
8	B	e8opnB4	B:612-775	CoV_S1_C	1043 → 1043.1 → 1043.1.1
9	C	e8opnC1	C:14-306	bCoV_S1_N	10 → 10.1 → 10.1.1
10	C	e8opnC2	C:776-1223	CoV_S2	1042 → 1042.1 → 1042.1.1
11	C	e8opnC3	C:612-775	CoV_S1_C	1043 → 1043.1 → 1043.1.1
12	C	e8opnC4	C:307-611	bCoV_S1_RBD	4169 → 4169.1 → 4169.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors