ECODEvolutionary Classification of Protein Domains

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PDB 8P9Y

ELECTRON MICROSCOPY0 chains12 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain Aview chain

4 domains

e8p9yA1(A:695-829,A:854-1146)e8p9yA2(A:309-328,A:530-694)e8p9yA3(A:15-308)e8p9yA4(A:329-529)

Chain Bview chain

4 domains

e8p9yB1(B:695-827,B:854-1146)e8p9yB2(B:329-529)e8p9yB3(B:309-328,B:530-694)e8p9yB4(B:15-308)

Chain Cview chain

4 domains

e8p9yC1(C:15-308)e8p9yC2(C:309-328,C:530-621,C:641-694)e8p9yC3(C:695-827,C:851-1146)e8p9yC4(C:329-529)

All Domains (12)

#	Chain	Domain ID	Range	Family	Classification
1	A	e8p9yA1	A:695-829,A:854-1146	CoV_S2	1042 → 1042.1 → 1042.1.1
2	A	e8p9yA2	A:309-328,A:530-694	CoV_S1_C	1043 → 1043.1 → 1043.1.1
3	A	e8p9yA3	A:15-308	bCoV_S1_N	10 → 10.1 → 10.1.1
4	A	e8p9yA4	A:329-529	bCoV_S1_RBD	4169 → 4169.1 → 4169.1.1
5	B	e8p9yB1	B:695-827,B:854-1146	CoV_S2	1042 → 1042.1 → 1042.1.1
6	B	e8p9yB2	B:329-529	bCoV_S1_RBD	4169 → 4169.1 → 4169.1.1
7	B	e8p9yB3	B:309-328,B:530-694	CoV_S1_C	1043 → 1043.1 → 1043.1.1
8	B	e8p9yB4	B:15-308	bCoV_S1_N	10 → 10.1 → 10.1.1
9	C	e8p9yC1	C:15-308	bCoV_S1_N	10 → 10.1 → 10.1.1
10	C	e8p9yC2	C:309-328,C:530-621,C:641-694	CoV_S1_C	1043 → 1043.1 → 1043.1.1
11	C	e8p9yC3	C:695-827,C:851-1146	CoV_S2	1042 → 1042.1 → 1042.1.1
12	C	e8p9yC4	C:329-529	bCoV_S1_RBD	4169 → 4169.1 → 4169.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors