ECODEvolutionary Classification of Protein Domains

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PDB 8PDD

X-RAY DIFFRACTION1.25 Å0 chains8 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain Aview chain

4 domains

e8pddA01(A:0-102,A:350-357)e8pddA02(A:103-186,A:188-244,A:246-266,A:393-412,A:414-465)e8pddA03(A:187,A:245,A:267-349,A:358-392,A:413)e8pddA04(A:466-591)

Chain Bview chain

4 domains

e8pddB1(B:1-103,B:351-358)e8pddB2(B:104-187,B:189-245,B:247-267,B:394-413,B:415-466)e8pddB3(B:188-188,B:246-246,B:268-350,B:359-393,B:414-414)e8pddB4(B:467-592)

All Domains (8)

#	Chain	Domain ID	Range	Family	Classification
1	A	e8pddA01	A:0-102,A:350-357	Glutaredoxin	2485 → 2485.1 → 2485.1.1
2	A	e8pddA02	A:103-186,A:188-244,A:246-266,A:393-412,A:414-465	FAD_binding_2,Pyr_redox_2	2003 → 2003.1 → 2003.1.2
3	A	e8pddA03	A:187,A:245,A:267-349,A:358-392,A:413	Pyr_redox	2003 → 2003.1 → 2003.1.2
4	A	e8pddA04	A:466-591	Pyr_redox_dim	244 → 244.2 → 244.2.1
5	B	e8pddB1	B:1-103,B:351-358	Glutaredoxin	2485 → 2485.1 → 2485.1.1
6	B	e8pddB2	B:104-187,B:189-245,B:247-267,B:394-413,B:415-466	FAD_binding_2,Pyr_redox_2	2003 → 2003.1 → 2003.1.2
7	B	e8pddB3	B:188-188,B:246-246,B:268-350,B:359-393,B:414-414	Pyr_redox	2003 → 2003.1 → 2003.1.2
8	B	e8pddB4	B:467-592	Pyr_redox_dim	244 → 244.2 → 244.2.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors