PDB 8QMA
ELECTRON MICROSCOPY0 chains30 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
Chain Aview chain
7 domainsChain Gview chain
2 domainsChain Iview chain
1 domainChain Jview chain
2 domainsChain Lview chain
2 domainsChain Mview chain
1 domainChain Nview chain
1 domainChain Oview chain
3 domainsChain Rview chain
1 domainChain Sview chain
1 domainAll Domains (30)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | A | e8qmaA01 | A:1-130,A:351-352,A:436-563,A:748-749 | 4010.1.1.0 | 4010 → 4010.1 → 4010.1.1 |
| 2 | A | e8qmaA02 | A:131-202,A:327-350,A:353-435 | RNA_pol_Rpb2_3 | 4010 → 4010.1 → 4010.1.1 |
| 3 | A | e8qmaA03 | A:564-691 | RNA_pol_Rpb2_6 | 1 → 1.1 → 1.1.2 |
| 4 | A | e8qmaA04 | A:692-747,A:750-770 | RNA_pol_Rpb2_6 | 1 → 1.1 → 1.1.2 |
| 5 | A | e8qmaA05 | A:771-798 | 1.1.2.0 | 1 → 1.1 → 1.1.2 |
| 6 | A | e8qmaA06 | A:799-954 | RNA_pol_Rpb2_6 | 1 → 1.1 → 1.1.2 |
| 7 | A | e8qmaA07 | A:948-1056 | RNA_pol_Rpb2_6,RNA_pol_Rpb2_7 | 4043 → 4043.1 → 4043.1.1 |
| 8 | C | e8qmaC01 | C:29-61,C:181-218 | RNA_pol_L | 305 → 305.1 → 305.1.1 |
| 9 | C | e8qmaC02 | C:62-180 | RNA_pol_A_bac | 240 → 240.2 → 240.2.1 |
| 10 | C | e8qmaC03 | C:272-324 | RNA_pol_A_CTD | 102 → 102.1 → 102.1.1 |
| 11 | D | e8qmaD1 | D:29-61,D:181-218 | RNA_pol_L | 305 → 305.1 → 305.1.1 |
| 12 | D | e8qmaD2 | D:62-180 | RNA_pol_A_bac | 240 → 240.2 → 240.2.1 |
| 13 | D | e8qmaD3 | D:272-324 | RNA_pol_A_CTD | 102 → 102.1 → 102.1.1 |
| 14 | G | e8qmaG01 | G:63-150 | Sod_Fe_N | 192 → 192.3 → 192.3.1 |
| 15 | G | e8qmaG02 | G:151-253 | Sod_Fe_C | 228 → 228.1 → 228.1.1 |
| 16 | I | e8qmaI01 | I:240-528 | PfkB | 2003 → 2003.6 → 2003.6.1 |
| 17 | J | e8qmaJ01 | J:100-350 | SET | 70 → 70.3 → 70.3.1 |
| 18 | J | e8qmaJ02 | J:351-482 | Rubis-subs-bind | 630 → 630.1 → 630.1.1 |
| 19 | L | e8qmaL01 | L:60-146 | Sod_Fe_N | 192 → 192.3 → 192.3.1 |
| 20 | L | e8qmaL02 | L:147-266 | Sod_Fe_C | 228 → 228.1 → 228.1.1 |
| 21 | M | e8qmaM01 | M:64-184 | Thioredoxin | 2485 → 2485.1 → 2485.1.1 |
| 22 | N | e8qmaN1 | N:64-184 | Thioredoxin | 2485 → 2485.1 → 2485.1.1 |
| 23 | O | e8qmaO01 | O:237-336,O:392-393,O:470-473,O:493-496,O:502 | Mur_ligase | 2003 → 2003.1 → 2003.1.8 |
| 24 | O | e8qmaO02 | O:337-391,O:394-469,O:474-492,O:497-501,O:503-572 | Mur_ligase_M | 2004 → 2004.1 → 2004.1.1 |
| 25 | O | e8qmaO03 | O:573-745 | Mur_ligase_C | 7570 → 7570.1 → 7570.1.1 |
| 26 | R | e8qmaR01 | R:60-140 | Cupin_3 | 10 → 10.12 → 10.12.1 |
| 27 | S | e8qmaS01 | S:134-312,S:341-446 | PfkB | 2003 → 2003.6 → 2003.6.1 |
| 28 | T | e8qmaT01 | T:1-377 | RNA_pol_Rpb1_1 | 4246 → 4246.1 → 4246.1.1 |
| 29 | T | e8qmaT02 | T:378-421,T:462-542 | RNA_pol_Rpb1_2 | 1 → 1.1 → 1.1.2 |
| 30 | T | e8qmaT03 | T:422-461 | 4951.1.1.0 | 4951 → 4951.1 → 4951.1.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors