PDB 8QO9
ELECTRON MICROSCOPY0 chains96 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
Chain 21view chain
1 domainChain 22view chain
1 domainChain 23view chain
1 domainChain 2Aview chain
1 domainChain 2bview chain
1 domainChain 2Bview chain
1 domainChain 2eview chain
1 domainChain 2fview chain
1 domainChain 2gview chain
1 domainChain 41view chain
1 domainChain 42view chain
1 domainChain 43view chain
1 domainChain 4bview chain
1 domainChain 4eview chain
1 domainChain 4fview chain
1 domainChain 4gview chain
1 domainChain 51view chain
1 domainChain 52view chain
1 domainChain 53view chain
1 domainChain 5bview chain
1 domainChain 5eview chain
1 domainChain 5fview chain
1 domainChain 5gview chain
1 domainChain 62view chain
1 domainChain 63view chain
1 domainChain 64view chain
1 domainChain 65view chain
1 domainChain 66view chain
1 domainChain 67view chain
1 domainChain 68view chain
1 domainChain 7view chain
1 domainChain 8view chain
2 domainsChain 9view chain
1 domainChain Aview chain
6 domainsChain Bview chain
12 domainsChain B3view chain
4 domainsChain B4view chain
1 domainChain B5view chain
1 domainChain B6view chain
1 domainChain BPview chain
1 domainChain Cview chain
5 domainsChain Dview chain
1 domainChain Eview chain
1 domainChain Fview chain
1 domainChain Gview chain
2 domainsChain Hview chain
1 domainChain Iview chain
1 domainChain Jview chain
1 domainChain Lview chain
2 domainsChain Mview chain
1 domainChain Nview chain
1 domainChain Qview chain
1 domainChain rview chain
1 domainChain sview chain
1 domainChain Tview chain
9 domainsChain vview chain
2 domainsChain wview chain
2 domainsChain Wview chain
1 domainChain Xview chain
1 domainChain zview chain
1 domainAll Domains (96)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | 21 | e8qo9211 | 21:2-81 | LSM | 4 → 4.1 → 4.1.1 |
| 2 | 22 | e8qo9221 | 22:26-73,22:93-118 | LSM | 4 → 4.1 → 4.1.1 |
| 3 | 23 | e8qo9231 | 23:4-75 | LSM | 4 → 4.1 → 4.1.1 |
| 4 | 2A | e8qo92A1 | 2A:2-163 | LRR_9 | 207 → 207.1 → 207.1.1 |
| 5 | 2b | e8qo92b1 | 2b:7-95 | LSM | 4 → 4.1 → 4.1.1 |
| 6 | 2B | e8qo92B1 | 2B:3-96 | RRM_1 | 304 → 304.9 → 304.9.1 |
| 7 | 2e | e8qo92e1 | 2e:18-92 | LSM | 4 → 4.1 → 4.1.1 |
| 8 | 2f | e8qo92f1 | 2f:7-81 | LSM | 4 → 4.1 → 4.1.1 |
| 9 | 2g | e8qo92g1 | 2g:4-76 | LSM | 4 → 4.1 → 4.1.1 |
| 10 | 41 | e8qo9411 | 41:2-81 | LSM | 4 → 4.1 → 4.1.1 |
| 11 | 42 | e8qo9421 | 42:26-73,42:93-118 | LSM | 4 → 4.1 → 4.1.1 |
| 12 | 43 | e8qo9431 | 43:4-75 | LSM | 4 → 4.1 → 4.1.1 |
| 13 | 4b | e8qo94b1 | 4b:7-95 | LSM | 4 → 4.1 → 4.1.1 |
| 14 | 4e | e8qo94e1 | 4e:18-92 | LSM | 4 → 4.1 → 4.1.1 |
| 15 | 4f | e8qo94f1 | 4f:7-81 | LSM | 4 → 4.1 → 4.1.1 |
| 16 | 4g | e8qo94g1 | 4g:4-76 | LSM | 4 → 4.1 → 4.1.1 |
| 17 | 51 | e8qo9511 | 51:2-81 | LSM | 4 → 4.1 → 4.1.1 |
| 18 | 52 | e8qo9521 | 52:26-73,52:93-118 | LSM | 4 → 4.1 → 4.1.1 |
| 19 | 53 | e8qo9531 | 53:4-75 | LSM | 4 → 4.1 → 4.1.1 |
| 20 | 5b | e8qo95b1 | 5b:7-95 | LSM | 4 → 4.1 → 4.1.1 |
| 21 | 5e | e8qo95e1 | 5e:18-92 | LSM | 4 → 4.1 → 4.1.1 |
| 22 | 5f | e8qo95f1 | 5f:7-81 | LSM | 4 → 4.1 → 4.1.1 |
| 23 | 5g | e8qo95g1 | 5g:4-76 | LSM | 4 → 4.1 → 4.1.1 |
| 24 | 62 | e8qo9621 | 62:1-90 | LSM | 4 → 4.1 → 4.1.1 |
| 25 | 63 | e8qo9631 | 63:16-97 | LSM | 4 → 4.1 → 4.1.1 |
| 26 | 64 | e8qo9641 | 64:2-80 | LSM | 4 → 4.1 → 4.1.1 |
| 27 | 65 | e8qo9651 | 65:10-85 | LSM | 4 → 4.1 → 4.1.1 |
| 28 | 66 | e8qo9661 | 66:7-76 | LSM | 4 → 4.1 → 4.1.1 |
| 29 | 67 | e8qo9671 | 67:11-87 | LSM | 4 → 4.1 → 4.1.1 |
| 30 | 68 | e8qo9681 | 68:7-67 | LSM | 4 → 4.1 → 4.1.1 |
| 31 | 7 | e8qo971 | 7:160-285 | Surp,PRP21_like_P | 574 → 574.1 → 574.1.1 |
| 32 | 8 | e8qo981 | 8:18-35,8:40-86 | zf-met | 386 → 386.1 → 386.1.1 |
| 33 | 8 | e8qo982 | 8:87-91,8:114-223 | SF3A2 | 319 → 319.2 → 319.2.1 |
| 34 | 9 | e8qo991 | 9:2-353 | 3403.1.1.0 | 3403 → 3403.1 → 3403.1.1 |
| 35 | A | e8qo9A1 | A:26-810 | PRO8NT,PROCN | 1038 → 1038.1 → 1038.1.1 |
| 36 | A | e8qo9A2 | A:811-1182 | RRM_4 | 304 → 304.48 → 304.48.1 |
| 37 | A | e8qo9A3 | A:1183-1502 | U6-snRNA_bdg,U5_2-snRNA_bdg | 4967 → 4967.1 → 4967.1.1 |
| 38 | A | e8qo9A4 | A:1755-2006 | PRP8_domainIV | 2484 → 2484.1 → 2484.1.1 |
| 39 | A | e8qo9A5 | A:1503-1754 | U6-snRNA_bdg | 2008 → 2008.1 → 2008.1.1 |
| 40 | A | e8qo9A6 | A:2067-2314 | JAB,PROCT | 2492 → 2492.1 → 2492.1.1 |
| 41 | B | e8qo9B1 | B:1312-1520 | DEAD | 2004 → 2004.1 → 2004.1.1 |
| 42 | B | e8qo9B2 | B:683-886 | Helicase_C | 2004 → 2004.1 → 2004.1.1 |
| 43 | B | e8qo9B3 | B:1825-1957 | Sec63 | 4156 → 4156.1 → 4156.1.1 |
| 44 | B | e8qo9B4 | B:433-682 | DEAD | 2004 → 2004.1 → 2004.1.1 |
| 45 | B | e8qo9B5 | B:2016-2125 | Sec63 | 11 → 11.1 → 11.1.1 |
| 46 | B | e8qo9B6 | B:1723-1824 | SNRNP200_wHTH | 101 → 101.1 → 101.1.2 |
| 47 | B | e8qo9B7 | B:887-993 | SNRNP200_wHTH | 101 → 101.1 → 101.1.2 |
| 48 | B | e8qo9B8 | B:994-1125 | Sec63 | 4156 → 4156.1 → 4156.1.1 |
| 49 | B | e8qo9B9 | B:1958-2015 | 102.5.1.0 | 102 → 102.5 → 102.5.1 |
| 50 | B | e8qo9B10 | B:1521-1722 | Helicase_C | 2004 → 2004.1 → 2004.1.1 |
| 51 | B | e8qo9B11 | B:1181-1311 | Sec63 | 11 → 11.1 → 11.1.1 |
| 52 | B | e8qo9B12 | B:1126-1180 | 102.5.1.0 | 102 → 102.5 → 102.5.1 |
| 53 | B3 | e8qo9B31 | B3:404-441,B3:773-807,B3:848-1132 | CPSF_A | 5 → 5.1 → 5.1.4 |
| 54 | B3 | e8qo9B32 | B3:1-403 | MMS1_N | 5 → 5.1 → 5.1.4 |
| 55 | B3 | e8qo9B33 | B3:1133-1217 | CPSF_A | 101 → 101.1 → 101.1.1 |
| 56 | B3 | e8qo9B34 | B3:442-772 | Beta-prop_RSE1_2nd | 5 → 5.1 → 5.1.4 |
| 57 | B4 | e8qo9B41 | B4:12-89 | RRM_1 | 304 → 304.9 → 304.9.1 |
| 58 | B5 | e8qo9B51 | B5:15-80 | SF3b10 | 1106 → 1106.1 → 1106.1.1 |
| 59 | B6 | e8qo9B61 | B6:12-125 | RRM_1 | 304 → 304.9 → 304.9.1 |
| 60 | BP | e8qo9BP1 | BP:7-91 | PHF5 | 377 → 377.1 → 377.1.4 |
| 61 | C | e8qo9C1 | C:829-957 | EFG_C | 304 → 304.24 → 304.24.1 |
| 62 | C | e8qo9C2 | C:581-659 | EFG_III | 304 → 304.24 → 304.24.1 |
| 63 | C | e8qo9C3 | C:660-828 | EFG_IV | 212 → 212.1 → 212.1.1 |
| 64 | C | e8qo9C4 | C:114-439 | GTP_EFTU | 2004 → 2004.1 → 2004.1.1 |
| 65 | C | e8qo9C5 | C:440-580 | GTP_EFTU_D2 | 1 → 1.1 → 1.1.7 |
| 66 | D | e8qo9D1 | D:2-138 | DIM1 | 2485 → 2485.1 → 2485.1.1 |
| 67 | E | e8qo9E1 | E:62-355 | WD40, Beta-prop_NOL10_N | 5 → 5.1 → 5.1.4 |
| 68 | F | e8qo9F1 | F:164-522 | WD40 | 5 → 5.1 → 5.1.4 |
| 69 | G | e8qo9G1 | G:18-35,G:40-86 | zf-met | 386 → 386.1 → 386.1.1 |
| 70 | G | e8qo9G2 | G:87-91,G:114-223 | SF3A2 | 319 → 319.2 → 319.2.1 |
| 71 | H | e8qo9H1 | H:2-353 | SF3a60_Prp9_C | 386 → 386.1 → 386.1.1 |
| 72 | I | e8qo9I1 | I:1-176 | PRP38 | 109 → 109.50 → 109.50.1 |
| 73 | J | e8qo9J1 | J:539-673 | Prp3_C | 304 → 304.110 → 304.110.1 |
| 74 | L | e8qo9L1 | L:85-216 | Nop | 606 → 606.1 → 606.1.1 |
| 75 | L | e8qo9L2 | L:217-333 | Nop | 102 → 102.1 → 102.1.4 |
| 76 | M | e8qo9M1 | M:4-128 | Ribosomal_L7Ae | 301 → 301.1 → 301.1.1 |
| 77 | N | e8qo9N1 | N:292-937 | TPR_14, TPR_16, TPR_19, PF29376 | 109 → 109.4 → 109.4.1 |
| 78 | Q | e8qo9Q1 | Q:3-144 | BUD31 | 3952 → 3952.1 → 3952.1.1 |
| 79 | r | e8qo9r1 | r:79-134 | zf-C2H2_jaz | 386 → 386.1 → 386.1.1 |
| 80 | s | e8qo9s1 | s:1-73 | ubiquitin | 221 → 221.1 → 221.1.1 |
| 81 | T | e8qo9T1 | T:134-162 | WW | 64 → 64.1 → 64.1.1 |
| 82 | T | e8qo9T2 | T:428-464 | WW | 64 → 64.1 → 64.1.1 |
| 83 | T | e8qo9T3 | T:517-579 | WW_TCERG1 | 64 → 64.1 → 64.1.1 |
| 84 | T | e8qo9T4 | T:661-717 | FF | 101 → 101.1 → 101.1.17 |
| 85 | T | e8qo9T5 | T:718-783 | FF | 101 → 101.1 → 101.1.17 |
| 86 | T | e8qo9T6 | T:784-845 | FF | 101 → 101.1 → 101.1.17 |
| 87 | T | e8qo9T7 | T:895-953 | FF | 101 → 101.1 → 101.1.17 |
| 88 | T | e8qo9T8 | T:954-1011 | FF | 101 → 101.1 → 101.1.17 |
| 89 | T | e8qo9T9 | T:1012-1080 | FF | 101 → 101.1 → 101.1.17 |
| 90 | v | e8qo9v1 | v:133-154,v:204-513 | WD40, Beta-prop_NOL10_N, Beta-prop_IFT122_1st | 5 → 5.1 → 5.1.4 |
| 91 | v | e8qo9v2 | v:5-132 | LisH_TPL | 558 → 558.1 → 558.1.1 |
| 92 | w | e8qo9w1 | w:133-154,w:204-513 | WD40, Beta-prop_NOL10_N, Beta-prop_IFT122_1st | 5 → 5.1 → 5.1.4 |
| 93 | w | e8qo9w2 | w:5-132 | LisH_TPL | 558 → 558.1 → 558.1.1 |
| 94 | W | e8qo9W1 | W:9-177 | Pro_isomerase | 75 → 75.1 → 75.1.1 |
| 95 | X | e8qo9X1 | X:8-82 | zf-U1 | 386 → 386.1 → 386.1.1 |
| 96 | z | e8qo9z1 | z:122-195 | RRM_1 | 304 → 304.9 → 304.9.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors