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PDB 8QO9

ELECTRON MICROSCOPY0 chains96 ECOD domains
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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

All Domains (96)

#ChainDomain IDRangeFamilyClassification
121e8qo921121:2-81LSM4 → 4.1 → 4.1.1
222e8qo922122:26-73,22:93-118LSM4 → 4.1 → 4.1.1
323e8qo923123:4-75LSM4 → 4.1 → 4.1.1
42Ae8qo92A12A:2-163LRR_9207 → 207.1 → 207.1.1
52be8qo92b12b:7-95LSM4 → 4.1 → 4.1.1
62Be8qo92B12B:3-96RRM_1304 → 304.9 → 304.9.1
72ee8qo92e12e:18-92LSM4 → 4.1 → 4.1.1
82fe8qo92f12f:7-81LSM4 → 4.1 → 4.1.1
92ge8qo92g12g:4-76LSM4 → 4.1 → 4.1.1
1041e8qo941141:2-81LSM4 → 4.1 → 4.1.1
1142e8qo942142:26-73,42:93-118LSM4 → 4.1 → 4.1.1
1243e8qo943143:4-75LSM4 → 4.1 → 4.1.1
134be8qo94b14b:7-95LSM4 → 4.1 → 4.1.1
144ee8qo94e14e:18-92LSM4 → 4.1 → 4.1.1
154fe8qo94f14f:7-81LSM4 → 4.1 → 4.1.1
164ge8qo94g14g:4-76LSM4 → 4.1 → 4.1.1
1751e8qo951151:2-81LSM4 → 4.1 → 4.1.1
1852e8qo952152:26-73,52:93-118LSM4 → 4.1 → 4.1.1
1953e8qo953153:4-75LSM4 → 4.1 → 4.1.1
205be8qo95b15b:7-95LSM4 → 4.1 → 4.1.1
215ee8qo95e15e:18-92LSM4 → 4.1 → 4.1.1
225fe8qo95f15f:7-81LSM4 → 4.1 → 4.1.1
235ge8qo95g15g:4-76LSM4 → 4.1 → 4.1.1
2462e8qo962162:1-90LSM4 → 4.1 → 4.1.1
2563e8qo963163:16-97LSM4 → 4.1 → 4.1.1
2664e8qo964164:2-80LSM4 → 4.1 → 4.1.1
2765e8qo965165:10-85LSM4 → 4.1 → 4.1.1
2866e8qo966166:7-76LSM4 → 4.1 → 4.1.1
2967e8qo967167:11-87LSM4 → 4.1 → 4.1.1
3068e8qo968168:7-67LSM4 → 4.1 → 4.1.1
317e8qo9717:160-285Surp,PRP21_like_P574 → 574.1 → 574.1.1
328e8qo9818:18-35,8:40-86zf-met386 → 386.1 → 386.1.1
338e8qo9828:87-91,8:114-223SF3A2319 → 319.2 → 319.2.1
349e8qo9919:2-3533403.1.1.03403 → 3403.1 → 3403.1.1
35Ae8qo9A1A:26-810PRO8NT,PROCN1038 → 1038.1 → 1038.1.1
36Ae8qo9A2A:811-1182RRM_4304 → 304.48 → 304.48.1
37Ae8qo9A3A:1183-1502U6-snRNA_bdg,U5_2-snRNA_bdg4967 → 4967.1 → 4967.1.1
38Ae8qo9A4A:1755-2006PRP8_domainIV2484 → 2484.1 → 2484.1.1
39Ae8qo9A5A:1503-1754U6-snRNA_bdg2008 → 2008.1 → 2008.1.1
40Ae8qo9A6A:2067-2314JAB,PROCT2492 → 2492.1 → 2492.1.1
41Be8qo9B1B:1312-1520DEAD2004 → 2004.1 → 2004.1.1
42Be8qo9B2B:683-886Helicase_C2004 → 2004.1 → 2004.1.1
43Be8qo9B3B:1825-1957Sec634156 → 4156.1 → 4156.1.1
44Be8qo9B4B:433-682DEAD2004 → 2004.1 → 2004.1.1
45Be8qo9B5B:2016-2125Sec6311 → 11.1 → 11.1.1
46Be8qo9B6B:1723-1824SNRNP200_wHTH101 → 101.1 → 101.1.2
47Be8qo9B7B:887-993SNRNP200_wHTH101 → 101.1 → 101.1.2
48Be8qo9B8B:994-1125Sec634156 → 4156.1 → 4156.1.1
49Be8qo9B9B:1958-2015102.5.1.0102 → 102.5 → 102.5.1
50Be8qo9B10B:1521-1722Helicase_C2004 → 2004.1 → 2004.1.1
51Be8qo9B11B:1181-1311Sec6311 → 11.1 → 11.1.1
52Be8qo9B12B:1126-1180102.5.1.0102 → 102.5 → 102.5.1
53B3e8qo9B31B3:404-441,B3:773-807,B3:848-1132CPSF_A5 → 5.1 → 5.1.4
54B3e8qo9B32B3:1-403MMS1_N5 → 5.1 → 5.1.4
55B3e8qo9B33B3:1133-1217CPSF_A101 → 101.1 → 101.1.1
56B3e8qo9B34B3:442-772Beta-prop_RSE1_2nd5 → 5.1 → 5.1.4
57B4e8qo9B41B4:12-89RRM_1304 → 304.9 → 304.9.1
58B5e8qo9B51B5:15-80SF3b101106 → 1106.1 → 1106.1.1
59B6e8qo9B61B6:12-125RRM_1304 → 304.9 → 304.9.1
60BPe8qo9BP1BP:7-91PHF5377 → 377.1 → 377.1.4
61Ce8qo9C1C:829-957EFG_C304 → 304.24 → 304.24.1
62Ce8qo9C2C:581-659EFG_III304 → 304.24 → 304.24.1
63Ce8qo9C3C:660-828EFG_IV212 → 212.1 → 212.1.1
64Ce8qo9C4C:114-439GTP_EFTU2004 → 2004.1 → 2004.1.1
65Ce8qo9C5C:440-580GTP_EFTU_D21 → 1.1 → 1.1.7
66De8qo9D1D:2-138DIM12485 → 2485.1 → 2485.1.1
67Ee8qo9E1E:62-355WD40, Beta-prop_NOL10_N5 → 5.1 → 5.1.4
68Fe8qo9F1F:164-522WD405 → 5.1 → 5.1.4
69Ge8qo9G1G:18-35,G:40-86zf-met386 → 386.1 → 386.1.1
70Ge8qo9G2G:87-91,G:114-223SF3A2319 → 319.2 → 319.2.1
71He8qo9H1H:2-353SF3a60_Prp9_C386 → 386.1 → 386.1.1
72Ie8qo9I1I:1-176PRP38109 → 109.50 → 109.50.1
73Je8qo9J1J:539-673Prp3_C304 → 304.110 → 304.110.1
74Le8qo9L1L:85-216Nop606 → 606.1 → 606.1.1
75Le8qo9L2L:217-333Nop102 → 102.1 → 102.1.4
76Me8qo9M1M:4-128Ribosomal_L7Ae301 → 301.1 → 301.1.1
77Ne8qo9N1N:292-937TPR_14, TPR_16, TPR_19, PF29376109 → 109.4 → 109.4.1
78Qe8qo9Q1Q:3-144BUD313952 → 3952.1 → 3952.1.1
79re8qo9r1r:79-134zf-C2H2_jaz386 → 386.1 → 386.1.1
80se8qo9s1s:1-73ubiquitin221 → 221.1 → 221.1.1
81Te8qo9T1T:134-162WW64 → 64.1 → 64.1.1
82Te8qo9T2T:428-464WW64 → 64.1 → 64.1.1
83Te8qo9T3T:517-579WW_TCERG164 → 64.1 → 64.1.1
84Te8qo9T4T:661-717FF101 → 101.1 → 101.1.17
85Te8qo9T5T:718-783FF101 → 101.1 → 101.1.17
86Te8qo9T6T:784-845FF101 → 101.1 → 101.1.17
87Te8qo9T7T:895-953FF101 → 101.1 → 101.1.17
88Te8qo9T8T:954-1011FF101 → 101.1 → 101.1.17
89Te8qo9T9T:1012-1080FF101 → 101.1 → 101.1.17
90ve8qo9v1v:133-154,v:204-513WD40, Beta-prop_NOL10_N, Beta-prop_IFT122_1st5 → 5.1 → 5.1.4
91ve8qo9v2v:5-132LisH_TPL558 → 558.1 → 558.1.1
92we8qo9w1w:133-154,w:204-513WD40, Beta-prop_NOL10_N, Beta-prop_IFT122_1st5 → 5.1 → 5.1.4
93we8qo9w2w:5-132LisH_TPL558 → 558.1 → 558.1.1
94We8qo9W1W:9-177Pro_isomerase75 → 75.1 → 75.1.1
95Xe8qo9X1X:8-82zf-U1386 → 386.1 → 386.1.1
96ze8qo9z1z:122-195RRM_1304 → 304.9 → 304.9.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors