PDB 8QSZ
0 chains38 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
Chain Aview chain
8 domainsChain Bview chain
7 domainsChain Cview chain
2 domainsChain Eview chain
2 domainsChain Fview chain
1 domainChain Gview chain
2 domainsChain Hview chain
1 domainChain Iview chain
2 domainsChain Jview chain
1 domainChain Kview chain
1 domainChain Lview chain
1 domainChain Xview chain
2 domainsAll Domains (38)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | A | e8qszA1 | A:2-342 | RNA_pol_Rpb1_1 | 4246 → 4246.1 → 4246.1.1 |
| 2 | A | e8qszA2 | A:669-877 | RNA_pol_Rpb1_5,RNA_pol_Rpb1_4 | 4958 → 4958.1 → 4958.1.1 |
| 3 | A | e8qszA3 | A:878-1062 | RNA_pol_Rpb1_6 | 4957 → 4957.1 → 4957.1.1 |
| 4 | A | e8qszA4 | A:1063-1116,A:1338-1456 | RNA_pol_Rpb1_5 | 4954 → 4954.1 → 4954.1.1 |
| 5 | A | e8qszA5 | A:526-668 | RNA_pol_Rpb1_3 | 4959 → 4959.1 → 4959.1.1 |
| 6 | A | e8qszA6 | A:1145-1278 | RNA_pol_Rpb1_7 | 4955 → 4955.1 → 4955.1.1 |
| 7 | A | e8qszA7 | A:340-525 | RNA_pol_Rpb1_2 | 1 → 1.1 → 1.1.2 |
| 8 | A | e8qszA8 | A:1272-1337 | 4956.1.1.0 | 4956 → 4956.1 → 4956.1.1 |
| 9 | B | e8qszB1 | B:10-57,B:77-121,B:149-203,B:391-527 | RNA_pol_Rpb2_1,RNA_pol_Rpb2_3 | 4010 → 4010.1 → 4010.1.1 |
| 10 | B | e8qszB2 | B:204-390 | RNA_pol_Rpb2_2 | 4041 → 4041.1 → 4041.1.1 |
| 11 | B | e8qszB3 | B:617-802 | 4042.1.1.0 | 4042 → 4042.1 → 4042.1.1 |
| 12 | B | e8qszB4 | B:1087-1210 | RNA_pol_Rpb2_6,RNA_pol_Rpb2_7 | 4043 → 4043.1 → 4043.1.1 |
| 13 | B | e8qszB5 | B:840-963 | RNA_pol_Rpb2_6 | 325 → 325.1 → 325.1.7 |
| 14 | B | e8qszB6 | B:528-616 | RNA_pol_Rpb2_4 | 4961 → 4961.1 → 4961.1.1 |
| 15 | B | e8qszB7 | B:803-839,B:964-1086 | RNA_pol_Rpb2_6 | 1 → 1.1 → 1.1.2 |
| 16 | C | e8qszC1 | C:4-40,C:174-266 | RNA_pol_L | 305 → 305.1 → 305.1.1 |
| 17 | C | e8qszC2 | C:41-173 | RNA_pol_A_bac | 240 → 240.2 → 240.2.1 |
| 18 | E | e8qszE1 | E:139-210 | RNA_pol_Rpb5_C | 840 → 840.1 → 840.1.1 |
| 19 | E | e8qszE2 | E:4-138 | RNA_pol_Rpb5_N | 2008 → 2008.3 → 2008.3.1 |
| 20 | F | e8qszF1 | F:60-142 | RNA_pol_Rpb6 | 152 → 152.1 → 152.1.1 |
| 21 | G | e8qszG1 | G:70-172 | S1 | 2 → 2.1 → 2.1.1 |
| 22 | G | e8qszG2 | G:3-69 | SHS2_Rpb7-N | 872 → 872.1 → 872.1.1 |
| 23 | H | e8qszH1 | H:2-125 | RNA_pol_Rpb8 | 2 → 2.1 → 2.1.1 |
| 24 | I | e8qszI01 | I:1-52 | RNA_POL_M_15KD | 375 → 375.1 → 375.1.1 |
| 25 | I | e8qszI02 | I:53-125 | TFIIS_C | 375 → 375.1 → 375.1.1 |
| 26 | J | e8qszJ1 | J:1-64 | RNA_pol_N | 101 → 101.4 → 101.4.1 |
| 27 | K | e8qszK1 | K:1-119 | RNA_pol_L_2 | 305 → 305.1 → 305.1.1 |
| 28 | L | e8qszL1 | L:19-63 | DNA_RNApol_7kD | 375 → 375.1 → 375.1.1 |
| 29 | X | e8qszX01 | X:1-261,X:289-300 | XRN_N | 2006 → 2006.1 → 2006.1.4 |
| 30 | X | e8qszX02 | X:301-404 | XRN_M | 3279 → 3279.1 → 3279.1.1 |
| 31 | Y | e8qszY01 | Y:-131--11 | Thioredoxin | 2485 → 2485.1 → 2485.1.1 |
| 32 | Y | e8qszY02 | Y:238-338 | Spt5-NGN | 304 → 304.17 → 304.17.1 |
| 33 | Y | e8qszY03 | Y:339-461 | KOW1_SPT5 | 4 → 4.1 → 4.1.1 |
| 34 | Y | e8qszY04 | Y:462-520 | KOW2_Spt5 | 4 → 4.1 → 4.1.1 |
| 35 | Y | e8qszY05 | Y:521-567 | KOW | 4 → 4.1 → 4.1.1 |
| 36 | Y | e8qszY06 | Y:593-640 | KOWx_SPT5 | 4 → 4.1 → 4.1.1 |
| 37 | Y | e8qszY07 | Y:641-687 | KOW4_SPT5 | 4 → 4.1 → 4.1.1 |
| 38 | Y | e8qszY08 | Y:727-774 | KOW5_SPT5 | 4 → 4.1 → 4.1.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors