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PDB 8R08

0 chains87 ECOD domains
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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

All Domains (87)

#ChainDomain IDRangeFamilyClassification
111e8r0811111:2-81LSM4 → 4.1 → 4.1.1
212e8r0812112:26-73,12:93-118LSM4 → 4.1 → 4.1.1
313e8r0813113:4-75LSM4 → 4.1 → 4.1.1
41be8r081b11b:7-95LSM4 → 4.1 → 4.1.1
51ee8r081e11e:18-92LSM4 → 4.1 → 4.1.1
61fe8r081f11f:7-81LSM4 → 4.1 → 4.1.1
71ge8r081g11g:4-76LSM4 → 4.1 → 4.1.1
81Ke8r081K11K:100-181RRM_1304 → 304.9 → 304.9.1
921e8r0821121:2-81LSM4 → 4.1 → 4.1.1
1022e8r0822122:26-73,22:93-118LSM4 → 4.1 → 4.1.1
1123e8r0823123:4-75LSM4 → 4.1 → 4.1.1
122Ae8r082A12A:2-163LRR_9207 → 207.1 → 207.1.1
132be8r082b12b:7-95LSM4 → 4.1 → 4.1.1
142Be8r082B12B:3-96RRM_1304 → 304.9 → 304.9.1
152ee8r082e12e:18-92LSM4 → 4.1 → 4.1.1
162fe8r082f12f:7-81LSM4 → 4.1 → 4.1.1
172ge8r082g12g:4-76LSM4 → 4.1 → 4.1.1
1841e8r0841141:2-81LSM4 → 4.1 → 4.1.1
1942e8r0842142:26-73,42:93-118LSM4 → 4.1 → 4.1.1
2043e8r0843143:4-75LSM4 → 4.1 → 4.1.1
214be8r084b14b:7-95LSM4 → 4.1 → 4.1.1
224Be8r084B14B:164-522WD405 → 5.1 → 5.1.4
234ee8r084e14e:18-92LSM4 → 4.1 → 4.1.1
244fe8r084f14f:7-81LSM4 → 4.1 → 4.1.1
254ge8r084g14g:4-76LSM4 → 4.1 → 4.1.1
2651e8r0851151:2-81LSM4 → 4.1 → 4.1.1
2752e8r0852152:26-73,52:93-118LSM4 → 4.1 → 4.1.1
2853e8r0853153:4-75LSM4 → 4.1 → 4.1.1
295be8r085b15b:7-95LSM4 → 4.1 → 4.1.1
305ee8r085e15e:18-92LSM4 → 4.1 → 4.1.1
315fe8r085f15f:7-81LSM4 → 4.1 → 4.1.1
325ge8r085g15g:4-76LSM4 → 4.1 → 4.1.1
3362e8r0862162:1-90LSM4 → 4.1 → 4.1.1
3463e8r0863163:16-97LSM4 → 4.1 → 4.1.1
3564e8r0864164:2-80LSM4 → 4.1 → 4.1.1
3665e8r0865165:10-85LSM4 → 4.1 → 4.1.1
3766e8r0866166:7-76LSM4 → 4.1 → 4.1.1
3867e8r0867167:11-87LSM4 → 4.1 → 4.1.1
3968e8r0868168:7-67LSM4 → 4.1 → 4.1.1
407e8r08717:160-285Surp,PRP21_like_P574 → 574.1 → 574.1.1
418e8r08818:18-35,8:40-86zf-met386 → 386.1 → 386.1.1
428e8r08828:87-91,8:114-223SF3A2319 → 319.2 → 319.2.1
439e8r08919:2-353386.1.1.0386 → 386.1 → 386.1.1
44Ae8r08A1A:26-810PRO8NT,PROCN1038 → 1038.1 → 1038.1.1
45Ae8r08A2A:811-1182RRM_4304 → 304.48 → 304.48.1
46Ae8r08A3A:1183-1502U6-snRNA_bdg,U5_2-snRNA_bdg4967 → 4967.1 → 4967.1.1
47Ae8r08A4A:1755-2006PRP8_domainIV2484 → 2484.1 → 2484.1.1
48Ae8r08A5A:1503-1754U6-snRNA_bdg2008 → 2008.1 → 2008.1.1
49Ae8r08A6A:2067-2314JAB,PROCT2492 → 2492.1 → 2492.1.1
50Be8r08B1B:1312-1520DEAD2004 → 2004.1 → 2004.1.1
51Be8r08B2B:683-886Helicase_C2004 → 2004.1 → 2004.1.1
52Be8r08B3B:1825-1957Sec634156 → 4156.1 → 4156.1.1
53Be8r08B4B:433-682DEAD2004 → 2004.1 → 2004.1.1
54Be8r08B5B:2016-2125Sec6311 → 11.1 → 11.1.1
55Be8r08B6B:1723-1824SNRNP200_wHTH101 → 101.1 → 101.1.2
56Be8r08B7B:887-993SNRNP200_wHTH101 → 101.1 → 101.1.2
57Be8r08B8B:994-1125Sec634156 → 4156.1 → 4156.1.1
58Be8r08B9B:1958-2015102.5.1.0102 → 102.5 → 102.5.1
59Be8r08B10B:1521-1722Helicase_C2004 → 2004.1 → 2004.1.1
60Be8r08B11B:1181-1311Sec6311 → 11.1 → 11.1.1
61Be8r08B12B:1126-1180102.5.1.0102 → 102.5 → 102.5.1
62B3e8r08B31B3:404-441,B3:773-807,B3:848-1132CPSF_A5 → 5.1 → 5.1.4
63B3e8r08B32B3:1-403MMS1_N5 → 5.1 → 5.1.4
64B3e8r08B33B3:1133-1217CPSF_A101 → 101.1 → 101.1.1
65B3e8r08B34B3:442-772Beta-prop_RSE1_2nd5 → 5.1 → 5.1.4
66B4e8r08B41B4:12-89RRM_1304 → 304.9 → 304.9.1
67B5e8r08B51B5:15-80SF3b101106 → 1106.1 → 1106.1.1
68B6e8r08B61B6:12-125RRM_1304 → 304.9 → 304.9.1
69BPe8r08BP1BP:7-91PHF5377 → 377.1 → 377.1.4
70Ce8r08C1C:829-957EFG_C304 → 304.24 → 304.24.1
71Ce8r08C2C:581-659EFG_III304 → 304.24 → 304.24.1
72Ce8r08C3C:660-828EFG_IV212 → 212.1 → 212.1.1
73Ce8r08C4C:114-439GTP_EFTU2004 → 2004.1 → 2004.1.1
74Ce8r08C5C:440-580GTP_EFTU_D21 → 1.1 → 1.1.7
75De8r08D1D:2-138DIM12485 → 2485.1 → 2485.1.1
76Ee8r08E1E:62-355WD40, Beta-prop_NOL10_N5 → 5.1 → 5.1.4
77Ge8r08G1G:352-630DEAD2004 → 2004.1 → 2004.1.1
78Ge8r08G2G:639-806Helicase_C2004 → 2004.1 → 2004.1.1
79Je8r08J1J:539-673Prp3_C304 → 304.110 → 304.110.1
80Ke8r08K1K:676-1005Pkinase206 → 206.1 → 206.1.1
81Le8r08L1L:85-216Nop606 → 606.1 → 606.1.1
82Le8r08L2L:217-333Nop102 → 102.1 → 102.1.4
83Me8r08M1M:4-128Ribosomal_L7Ae301 → 301.1 → 301.1.1
84Ne8r08N1N:292-937TPR_14, TPR_16, TPR_19, PF29376109 → 109.4 → 109.4.1
85Re8r08R1R:369-474RRM_1304 → 304.9 → 304.9.1
86Ue8r08U1U:223-556UCH219 → 219.1 → 219.1.1
87Ue8r08U2U:105-190zf-UBP376 → 376.1 → 376.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors