PDB 8R09
0 chains78 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
Chain 21view chain
1 domainChain 22view chain
1 domainChain 23view chain
1 domainChain 2Aview chain
1 domainChain 2bview chain
1 domainChain 2Bview chain
1 domainChain 2eview chain
1 domainChain 2fview chain
1 domainChain 2gview chain
1 domainChain 41view chain
1 domainChain 42view chain
1 domainChain 43view chain
1 domainChain 4bview chain
1 domainChain 4eview chain
1 domainChain 4fview chain
1 domainChain 4gview chain
1 domainChain 51view chain
1 domainChain 52view chain
1 domainChain 53view chain
1 domainChain 5bview chain
1 domainChain 5eview chain
1 domainChain 5fview chain
1 domainChain 5gview chain
1 domainChain 62view chain
1 domainChain 63view chain
1 domainChain 64view chain
1 domainChain 65view chain
1 domainChain 66view chain
1 domainChain 67view chain
1 domainChain 68view chain
1 domainChain 7view chain
1 domainChain 8view chain
2 domainsChain 9view chain
1 domainChain Aview chain
6 domainsChain Bview chain
12 domainsChain B3view chain
4 domainsChain B4view chain
1 domainChain B5view chain
1 domainChain B6view chain
1 domainChain BPview chain
1 domainChain Cview chain
5 domainsChain Dview chain
1 domainChain Eview chain
1 domainChain Fview chain
1 domainChain Gview chain
2 domainsChain Jview chain
1 domainChain Lview chain
2 domainsChain Mview chain
1 domainChain Nview chain
1 domainChain Uview chain
2 domainsChain Wview chain
1 domainAll Domains (78)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | 21 | e8r09211 | 21:2-81 | LSM | 4 → 4.1 → 4.1.1 |
| 2 | 22 | e8r09221 | 22:26-73,22:93-118 | LSM | 4 → 4.1 → 4.1.1 |
| 3 | 23 | e8r09231 | 23:4-75 | LSM | 4 → 4.1 → 4.1.1 |
| 4 | 2A | e8r092A1 | 2A:2-163 | LRR_9 | 207 → 207.1 → 207.1.1 |
| 5 | 2b | e8r092b1 | 2b:7-95 | LSM | 4 → 4.1 → 4.1.1 |
| 6 | 2B | e8r092B1 | 2B:3-96 | RRM_1 | 304 → 304.9 → 304.9.1 |
| 7 | 2e | e8r092e1 | 2e:18-92 | LSM | 4 → 4.1 → 4.1.1 |
| 8 | 2f | e8r092f1 | 2f:7-81 | LSM | 4 → 4.1 → 4.1.1 |
| 9 | 2g | e8r092g1 | 2g:4-76 | LSM | 4 → 4.1 → 4.1.1 |
| 10 | 41 | e8r09411 | 41:2-81 | LSM | 4 → 4.1 → 4.1.1 |
| 11 | 42 | e8r09421 | 42:26-73,42:93-118 | LSM | 4 → 4.1 → 4.1.1 |
| 12 | 43 | e8r09431 | 43:4-75 | LSM | 4 → 4.1 → 4.1.1 |
| 13 | 4b | e8r094b1 | 4b:7-95 | LSM | 4 → 4.1 → 4.1.1 |
| 14 | 4e | e8r094e1 | 4e:18-92 | LSM | 4 → 4.1 → 4.1.1 |
| 15 | 4f | e8r094f1 | 4f:7-81 | LSM | 4 → 4.1 → 4.1.1 |
| 16 | 4g | e8r094g1 | 4g:4-76 | LSM | 4 → 4.1 → 4.1.1 |
| 17 | 51 | e8r09511 | 51:2-81 | LSM | 4 → 4.1 → 4.1.1 |
| 18 | 52 | e8r09521 | 52:26-73,52:93-118 | LSM | 4 → 4.1 → 4.1.1 |
| 19 | 53 | e8r09531 | 53:4-75 | LSM | 4 → 4.1 → 4.1.1 |
| 20 | 5b | e8r095b1 | 5b:7-95 | LSM | 4 → 4.1 → 4.1.1 |
| 21 | 5e | e8r095e1 | 5e:18-92 | LSM | 4 → 4.1 → 4.1.1 |
| 22 | 5f | e8r095f1 | 5f:7-81 | LSM | 4 → 4.1 → 4.1.1 |
| 23 | 5g | e8r095g1 | 5g:4-76 | LSM | 4 → 4.1 → 4.1.1 |
| 24 | 62 | e8r09621 | 62:1-90 | LSM | 4 → 4.1 → 4.1.1 |
| 25 | 63 | e8r09631 | 63:16-97 | LSM | 4 → 4.1 → 4.1.1 |
| 26 | 64 | e8r09641 | 64:2-80 | LSM | 4 → 4.1 → 4.1.1 |
| 27 | 65 | e8r09651 | 65:10-85 | LSM | 4 → 4.1 → 4.1.1 |
| 28 | 66 | e8r09661 | 66:7-76 | LSM | 4 → 4.1 → 4.1.1 |
| 29 | 67 | e8r09671 | 67:11-87 | LSM | 4 → 4.1 → 4.1.1 |
| 30 | 68 | e8r09681 | 68:7-67 | LSM | 4 → 4.1 → 4.1.1 |
| 31 | 7 | e8r0971 | 7:160-285 | Surp,PRP21_like_P | 574 → 574.1 → 574.1.1 |
| 32 | 8 | e8r0981 | 8:18-35,8:40-86 | zf-met | 386 → 386.1 → 386.1.1 |
| 33 | 8 | e8r0982 | 8:87-91,8:114-223 | SF3A2 | 319 → 319.2 → 319.2.1 |
| 34 | 9 | e8r0991 | 9:2-353 | 386.1.1.0 | 386 → 386.1 → 386.1.1 |
| 35 | A | e8r09A1 | A:26-810 | PRO8NT,PROCN | 1038 → 1038.1 → 1038.1.1 |
| 36 | A | e8r09A2 | A:811-1182 | RRM_4 | 304 → 304.48 → 304.48.1 |
| 37 | A | e8r09A3 | A:1183-1502 | U6-snRNA_bdg,U5_2-snRNA_bdg | 4967 → 4967.1 → 4967.1.1 |
| 38 | A | e8r09A4 | A:1755-2006 | PRP8_domainIV | 2484 → 2484.1 → 2484.1.1 |
| 39 | A | e8r09A5 | A:1503-1754 | U6-snRNA_bdg | 2008 → 2008.1 → 2008.1.1 |
| 40 | A | e8r09A6 | A:2067-2314 | JAB,PROCT | 2492 → 2492.1 → 2492.1.1 |
| 41 | B | e8r09B1 | B:1312-1520 | DEAD | 2004 → 2004.1 → 2004.1.1 |
| 42 | B | e8r09B2 | B:683-886 | Helicase_C | 2004 → 2004.1 → 2004.1.1 |
| 43 | B | e8r09B3 | B:1825-1957 | Sec63 | 4156 → 4156.1 → 4156.1.1 |
| 44 | B | e8r09B4 | B:433-682 | DEAD | 2004 → 2004.1 → 2004.1.1 |
| 45 | B | e8r09B5 | B:2016-2125 | Sec63 | 11 → 11.1 → 11.1.1 |
| 46 | B | e8r09B6 | B:1723-1824 | SNRNP200_wHTH | 101 → 101.1 → 101.1.2 |
| 47 | B | e8r09B7 | B:887-993 | SNRNP200_wHTH | 101 → 101.1 → 101.1.2 |
| 48 | B | e8r09B8 | B:994-1125 | Sec63 | 4156 → 4156.1 → 4156.1.1 |
| 49 | B | e8r09B9 | B:1958-2015 | 102.5.1.0 | 102 → 102.5 → 102.5.1 |
| 50 | B | e8r09B10 | B:1521-1722 | Helicase_C | 2004 → 2004.1 → 2004.1.1 |
| 51 | B | e8r09B11 | B:1181-1311 | Sec63 | 11 → 11.1 → 11.1.1 |
| 52 | B | e8r09B12 | B:1126-1180 | 102.5.1.0 | 102 → 102.5 → 102.5.1 |
| 53 | B3 | e8r09B31 | B3:404-441,B3:773-807,B3:848-1132 | CPSF_A | 5 → 5.1 → 5.1.4 |
| 54 | B3 | e8r09B32 | B3:1-403 | MMS1_N | 5 → 5.1 → 5.1.4 |
| 55 | B3 | e8r09B33 | B3:1133-1217 | CPSF_A | 101 → 101.1 → 101.1.1 |
| 56 | B3 | e8r09B34 | B3:442-772 | Beta-prop_RSE1_2nd | 5 → 5.1 → 5.1.4 |
| 57 | B4 | e8r09B41 | B4:12-89 | RRM_1 | 304 → 304.9 → 304.9.1 |
| 58 | B5 | e8r09B51 | B5:15-80 | SF3b10 | 1106 → 1106.1 → 1106.1.1 |
| 59 | B6 | e8r09B61 | B6:12-125 | RRM_1 | 304 → 304.9 → 304.9.1 |
| 60 | BP | e8r09BP1 | BP:7-91 | PHF5 | 377 → 377.1 → 377.1.4 |
| 61 | C | e8r09C1 | C:829-957 | EFG_C | 304 → 304.24 → 304.24.1 |
| 62 | C | e8r09C2 | C:581-659 | EFG_III | 304 → 304.24 → 304.24.1 |
| 63 | C | e8r09C3 | C:660-828 | EFG_IV | 212 → 212.1 → 212.1.1 |
| 64 | C | e8r09C4 | C:114-439 | GTP_EFTU | 2004 → 2004.1 → 2004.1.1 |
| 65 | C | e8r09C5 | C:440-580 | GTP_EFTU_D2 | 1 → 1.1 → 1.1.7 |
| 66 | D | e8r09D1 | D:2-138 | DIM1 | 2485 → 2485.1 → 2485.1.1 |
| 67 | E | e8r09E1 | E:62-355 | WD40, Beta-prop_NOL10_N | 5 → 5.1 → 5.1.4 |
| 68 | F | e8r09F1 | F:164-522 | WD40 | 5 → 5.1 → 5.1.4 |
| 69 | G | e8r09G1 | G:352-630 | DEAD | 2004 → 2004.1 → 2004.1.1 |
| 70 | G | e8r09G2 | G:639-806 | Helicase_C | 2004 → 2004.1 → 2004.1.1 |
| 71 | J | e8r09J1 | J:539-673 | Prp3_C | 304 → 304.110 → 304.110.1 |
| 72 | L | e8r09L1 | L:85-216 | Nop | 606 → 606.1 → 606.1.1 |
| 73 | L | e8r09L2 | L:217-333 | Nop | 102 → 102.1 → 102.1.4 |
| 74 | M | e8r09M1 | M:4-128 | Ribosomal_L7Ae | 301 → 301.1 → 301.1.1 |
| 75 | N | e8r09N1 | N:292-937 | TPR_14, TPR_16, TPR_19, PF29376 | 109 → 109.4 → 109.4.1 |
| 76 | U | e8r09U1 | U:223-556 | UCH | 219 → 219.1 → 219.1.1 |
| 77 | U | e8r09U2 | U:105-190 | zf-UBP | 376 → 376.1 → 376.1.1 |
| 78 | W | e8r09W1 | W:9-177 | Pro_isomerase | 75 → 75.1 → 75.1.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors