PDB 8RAM
0 chains39 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
Chain Aview chain
9 domainsChain Bview chain
7 domainsChain Cview chain
2 domainsChain Dview chain
1 domainChain Eview chain
2 domainsChain Fview chain
1 domainChain Gview chain
2 domainsChain Hview chain
1 domainChain Iview chain
2 domainsChain Jview chain
1 domainChain Kview chain
1 domainChain Lview chain
1 domainChain Mview chain
1 domainChain Yview chain
1 domainAll Domains (39)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | A | e8ramA1 | A:1060-1102,A:1301-1445 | RNA_pol_Rpb1_5 | 4954 → 4954.1 → 4954.1.1 |
| 2 | A | e8ramA2 | A:375-435 | RNA_pol_Rpb1_2 | 275 → 275.1 → 275.1.1 |
| 3 | A | e8ramA3 | A:663-871 | RNA_pol_Rpb1_5,RNA_pol_Rpb1_4 | 4958 → 4958.1 → 4958.1.1 |
| 4 | A | e8ramA4 | A:2-336 | RNA_pol_Rpb1_1 | 4246 → 4246.1 → 4246.1.1 |
| 5 | A | e8ramA5 | A:337-374,A:436-519 | RNA_pol_Rpb1_2 | 1 → 1.1 → 1.1.2 |
| 6 | A | e8ramA6 | A:1103-1131,A:1243-1300 | 4956.1.1.0 | 4956 → 4956.1 → 4956.1.1 |
| 7 | A | e8ramA7 | A:872-1059 | RNA_pol_Rpb1_6 | 4957 → 4957.1 → 4957.1.1 |
| 8 | A | e8ramA8 | A:1132-1242 | RNA_pol_Rpb1_7 | 4955 → 4955.1 → 4955.1.1 |
| 9 | A | e8ramA9 | A:520-662 | RNA_pol_Rpb1_3 | 4959 → 4959.1 → 4959.1.1 |
| 10 | B | e8ramB1 | B:1098-1224 | RNA_pol_Rpb2_6,RNA_pol_Rpb2_7 | 4043 → 4043.1 → 4043.1.1 |
| 11 | B | e8ramB2 | B:542-630 | RNA_pol_Rpb2_4 | 4961 → 4961.1 → 4961.1.1 |
| 12 | B | e8ramB3 | B:631-813 | 4042.1.1.0 | 4042 → 4042.1 → 4042.1.1 |
| 13 | B | e8ramB4 | B:20-138,B:164-218,B:405-541 | RNA_pol_Rpb2_1,RNA_pol_Rpb2_3 | 4010 → 4010.1 → 4010.1.1 |
| 14 | B | e8ramB5 | B:219-404 | RNA_pol_Rpb2_2 | 4041 → 4041.1 → 4041.1.1 |
| 15 | B | e8ramB6 | B:814-850,B:975-1097 | RNA_pol_Rpb2_6 | 1 → 1.1 → 1.1.2 |
| 16 | B | e8ramB7 | B:851-974 | RNA_pol_Rpb2_6 | 325 → 325.1 → 325.1.7 |
| 17 | C | e8ramC1 | C:3-41,C:173-268 | RNA_pol_L | 305 → 305.1 → 305.1.1 |
| 18 | C | e8ramC2 | C:42-172 | RNA_pol_A_bac | 240 → 240.2 → 240.2.1 |
| 19 | D | e8ramD1 | D:10-24,D:140-221 | RNA_pol_Rpb4 | 102 → 102.1 → 102.1.1 |
| 20 | E | e8ramE1 | E:144-215 | RNA_pol_Rpb5_C | 840 → 840.1 → 840.1.1 |
| 21 | E | e8ramE2 | E:5-143 | RNA_pol_Rpb5_N | 2008 → 2008.3 → 2008.3.1 |
| 22 | F | e8ramF1 | F:72-155 | RNA_pol_Rpb6 | 152 → 152.1 → 152.1.1 |
| 23 | G | e8ramG1 | G:81-169 | S1 | 2 → 2.1 → 2.1.1 |
| 24 | G | e8ramG2 | G:1-80 | SHS2_Rpb7-N | 872 → 872.1 → 872.1.1 |
| 25 | H | e8ramH1 | H:2-146 | RNA_pol_Rpb8 | 2 → 2.1 → 2.1.1 |
| 26 | I | e8ramI1 | I:1-49 | RNA_POL_M_15KD | 375 → 375.1 → 375.1.1 |
| 27 | I | e8ramI2 | I:50-121 | TFIIS_C | 375 → 375.1 → 375.1.1 |
| 28 | J | e8ramJ1 | J:1-65 | RNA_pol_N | 101 → 101.4 → 101.4.1 |
| 29 | K | e8ramK1 | K:1-114 | RNA_pol_L_2 | 305 → 305.1 → 305.1.1 |
| 30 | L | e8ramL1 | L:25-70 | DNA_RNApol_7kD | 375 → 375.1 → 375.1.1 |
| 31 | M | e8ramM01 | M:32-89 | Elf1 | 375 → 375.1 → 375.1.1 |
| 32 | Y | e8ramY1 | Y:3-100 | Spt4 | 375 → 375.1 → 375.1.1 |
| 33 | Z | e8ramZ1 | Z:287-378 | Spt5-NGN | 304 → 304.17 → 304.17.1 |
| 34 | Z | e8ramZ2 | Z:379-508 | KOW, KOW1_SPT5 | 4 → 4.1 → 4.1.1 |
| 35 | Z | e8ramZ3 | Z:534-583 | KOW2_Spt5 | 4 → 4.1 → 4.1.1 |
| 36 | Z | e8ramZ4 | Z:584-640 | KOW | 4 → 4.1 → 4.1.1 |
| 37 | Z | e8ramZ5 | Z:641-689,Z:694-695 | KOWx_SPT5 | 4 → 4.1 → 4.1.1 |
| 38 | Z | e8ramZ6 | Z:690-693,Z:696-746 | KOW4_SPT5 | 4 → 4.1 → 4.1.1 |
| 39 | Z | e8ramZ7 | Z:814-840 | KOW5_SPT5 | 4 → 4.1 → 4.1.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors