PDB 8RD8
ELECTRON MICROSCOPY0 chains60 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
Chain A4view chain
1 domainChain aAview chain
1 domainChain Afview chain
1 domainChain Baview chain
1 domainChain bkview chain
1 domainChain BQview chain
2 domainsChain C1view chain
2 domainsChain Clview chain
2 domainsChain CTview chain
2 domainsChain Dview chain
1 domainChain dhview chain
1 domainChain Dmview chain
1 domainChain E5view chain
2 domainsChain E9view chain
1 domainChain epview chain
1 domainChain Fview chain
1 domainChain F7view chain
1 domainChain FGview chain
1 domainChain fJview chain
1 domainChain GRview chain
2 domainsChain GSview chain
1 domainChain Hview chain
3 domainsChain HKview chain
1 domainChain IXview chain
1 domainChain Jeview chain
1 domainChain JYview chain
1 domainChain Kdview chain
1 domainChain KUview chain
1 domainChain L6view chain
1 domainChain Lgview chain
1 domainChain MBview chain
1 domainChain MMview chain
1 domainChain Ncview chain
1 domainChain NVview chain
1 domainChain Oiview chain
1 domainChain OLview chain
1 domainChain Pjview chain
1 domainChain POview chain
1 domainChain Qbview chain
1 domainChain QZview chain
1 domainChain R3view chain
1 domainChain RFview chain
1 domainChain Snview chain
1 domainChain SPview chain
1 domainChain TIview chain
1 domainChain Toview chain
1 domainChain UCview chain
2 domainsChain VHview chain
1 domainChain WDview chain
1 domainChain XEview chain
1 domainChain YWview chain
1 domainAll Domains (60)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | A4 | e8rd8A401 | 1-245 | Ribosomal_S2 | 2007 → 2007.6 → 2007.6.1 |
| 2 | aA | e8rd8aA01 | 1-60 | Ribosomal_L32p | 375 → 375.1 → 375.1.1 |
| 3 | Af | e8rd8Af01 | 1-212 | Ribosomal_L3 | 1 → 1.1 → 1.1.7 |
| 4 | Ba | e8rd8Ba01 | 1-44 | Ribosomal_L34 | 3074 → 3074.1 → 3074.1.1 |
| 5 | bk | e8rd8bk01 | 1-51 | Ribosomal_L33 | 375 → 375.1 → 375.1.1 |
| 6 | BQ | e8rd8BQ01 | 1-69 | Ribosomal_S8 | 320 → 320.2 → 320.2.1 |
| 7 | BQ | e8rd8BQ02 | 70-132 | Ribosomal_S8 | 320 → 320.2 → 320.2.1 |
| 8 | C1 | e8rd8C101 | 1-52 | Ribosomal_L9_N | 4076 → 4076.1 → 4076.1.1 |
| 9 | C1 | e8rd8C102 | 53-163 | Ribosomal_L9_C | 523 → 523.1 → 523.1.1 |
| 10 | Cl | e8rd8Cl01 | 1-126 | Ribosomal_L2 | 2 → 2.1 → 2.1.1 |
| 11 | Cl | e8rd8Cl02 | 127-273 | Ribosomal_L2_C | 4 → 4.1 → 4.1.1 |
| 12 | CT | e8rd8CT01 | 1-107 | KH_2 | 327 → 327.11 → 327.11.1 |
| 13 | CT | e8rd8CT02 | 108-208 | Ribosomal_S3_C | 230 → 230.2 → 230.2.1 |
| 14 | D | e8rd8D01 | 1-100 | Ribosomal_S30AE | 330 → 330.2 → 330.2.1 |
| 15 | dh | e8rd8dh01 | 1-65 | Ribosomal_L35p | 4281 → 4281.1 → 4281.1.1 |
| 16 | Dm | e8rd8Dm01 | 1-213 | Ribosomal_S4 | 221 → 221.1 → 221.1.2 |
| 17 | E5 | e8rd8E501 | 1-82 | Ribosomal_S5 | 3274 → 3274.1 → 3274.1.1 |
| 18 | E5 | e8rd8E502 | 83-171 | Ribosomal_S5_C | 212 → 212.1 → 212.1.1 |
| 19 | E9 | e8rd8E901 | 1-200 | Ribosomal_L4 | 7559 → 7559.1 → 7559.1.1 |
| 20 | ep | e8rd8ep01 | 1-38 | Ribosomal_L36 | 919 → 919.1 → 919.1.1 |
| 21 | F | e8rd8F01 | 1-128 | Ribosomal_S9 | 212 → 212.1 → 212.1.1 |
| 22 | F7 | e8rd8F701 | 1-178 | Ribosomal_L5_C | 882 → 882.1 → 882.1.1 |
| 23 | FG | e8rd8FG01 | 1-124 | Ribosomal_S6 | 304 → 304.12 → 304.12.1 |
| 24 | fJ | e8rd8fJ01 | 1-91 | Ribosomal_L31 | 4987 → 4987.1 → 4987.1.1 |
| 25 | GR | e8rd8GR01 | 1-83 | Ribosomal_L6 | 318 → 318.1 → 318.1.1 |
| 26 | GR | e8rd8GR02 | 84-177 | Ribosomal_L6 | 318 → 318.1 → 318.1.1 |
| 27 | GS | e8rd8GS01 | 1-157 | Ribosomal_S7 | 167 → 167.1 → 167.1.1 |
| 28 | H | e8rd8H01 | 1-205 | GTP_EFTU | 2004 → 2004.1 → 2004.1.1 |
| 29 | H | e8rd8H02 | 206-303 | GTP_EFTU_D2 | 1 → 1.1 → 1.1.7 |
| 30 | H | e8rd8H03 | 304-393 | GTP_EFTU_D3 | 1 → 1.1 → 1.1.8 |
| 31 | HK | e8rd8HK01 | 1-101 | Ribosomal_S14 | 377 → 377.1 → 377.1.1 |
| 32 | IX | e8rd8IX01 | 1-142 | Ribosomal_L13 | 2490 → 2490.2 → 2490.2.1 |
| 33 | Je | e8rd8Je01 | 1-122 | Ribosomal_L14 | 3174 → 3174.1 → 3174.1.1 |
| 34 | JY | e8rd8JY01 | 1-103 | Ribosomal_S10 | 304 → 304.44 → 304.44.1 |
| 35 | Kd | e8rd8Kd01 | 1-146 | Ribosomal_uL15_N | 2490 → 2490.3 → 2490.3.1 |
| 36 | KU | e8rd8KU01 | 1-129 | Ribosomal_S11 | 2484 → 2484.1 → 2484.1.1 |
| 37 | L6 | e8rd8L601 | 1-124 | Ribosom_S12_S23 | 2 → 2.1 → 2.1.1 |
| 38 | Lg | e8rd8Lg01 | 1-137 | Ribosomal_L16 | 325 → 325.1 → 325.1.5 |
| 39 | MB | e8rd8MB01 | 1-119 | Ribosomal_L17 | 218 → 218.3 → 218.3.1 |
| 40 | MM | e8rd8MM01 | 1-118 | Ribosomal_S13 | 102 → 102.2 → 102.2.1 |
| 41 | Nc | e8rd8Nc01 | 1-116 | Ribosomal_L18p | 2484 → 2484.1 → 2484.1.1 |
| 42 | NV | e8rd8NV01 | 1-71 | Ribosomal_S21 | 3666 → 3666.1 → 3666.1.1 |
| 43 | Oi | e8rd8Oi01 | 1-130 | Ribosomal_L19 | 4 → 4.1 → 4.1.1 |
| 44 | OL | e8rd8OL01 | 1-88 | Ribosomal_S15 | 616 → 616.1 → 616.1.1 |
| 45 | Pj | e8rd8Pj01 | 1-89 | Ribosomal_S16 | 837 → 837.1 → 837.1.1 |
| 46 | PO | e8rd8PO01 | 1-118 | Ribosomal_L20 | 143 → 143.2 → 143.2.1 |
| 47 | Qb | e8rd8Qb01 | 1-103 | Ribosomal_L21p | 4186 → 4186.1 → 4186.1.1 |
| 48 | QZ | e8rd8QZ01 | 1-91 | Ribosomal_S17 | 2 → 2.1 → 2.1.1 |
| 49 | R3 | e8rd8R301 | 1-76 | Ribosomal_S18 | 101 → 101.1 → 101.1.1 |
| 50 | RF | e8rd8RF01 | 1-109 | Ribosomal_L22 | 218 → 218.2 → 218.2.1 |
| 51 | Sn | e8rd8Sn01 | 1-110 | Ribosomal_L23 | 304 → 304.109 → 304.109.1 |
| 52 | SP | e8rd8SP01 | 1-91 | Ribosomal_S19 | 838 → 838.1 → 838.1.1 |
| 53 | TI | e8rd8TI01 | 1-105 | ribosomal_L24 | 4 → 4.1 → 4.1.1 |
| 54 | To | e8rd8To01 | 1-88 | Ribosomal_S20p | 604 → 604.9 → 604.9.1 |
| 55 | UC | e8rd8UC01 | 1-102 | Ribosomal_L25p | 239 → 239.1 → 239.1.1 |
| 56 | UC | e8rd8UC02 | 103-215 | Ribosomal_TL5_C | 240 → 240.1 → 240.1.1 |
| 57 | VH | e8rd8VH01 | 1-85 | Ribosomal_L27 | 325 → 325.1 → 325.1.8 |
| 58 | WD | e8rd8WD01 | 1-78 | Ribosomal_L28 | 4232 → 4232.1 → 4232.1.1 |
| 59 | XE | e8rd8XE01 | 1-65 | 192.4.1.0 | 192 → 192.4 → 192.4.1 |
| 60 | YW | e8rd8YW01 | 1-59 | Ribosomal_L30 | 887 → 887.1 → 887.1.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors