PDB 8RDW
ELECTRON MICROSCOPY0 chains61 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
Loading viewer...
Domains by Chain
Chain A4view chain
1 domainChain aAview chain
1 domainChain Afview chain
1 domainChain Baview chain
1 domainChain bkview chain
1 domainChain BQview chain
2 domainsChain C1view chain
2 domainsChain Clview chain
2 domainsChain CTview chain
2 domainsChain Dview chain
2 domainsChain dhview chain
1 domainChain Dmview chain
1 domainChain E5view chain
2 domainsChain E9view chain
1 domainChain epview chain
1 domainChain Fview chain
1 domainChain F7view chain
1 domainChain FGview chain
1 domainChain fJview chain
1 domainChain GRview chain
2 domainsChain GSview chain
1 domainChain Hview chain
3 domainsChain HKview chain
1 domainChain IXview chain
1 domainChain Jeview chain
1 domainChain JYview chain
1 domainChain Kdview chain
1 domainChain KUview chain
1 domainChain L6view chain
1 domainChain Lgview chain
1 domainChain MBview chain
1 domainChain MMview chain
1 domainChain Ncview chain
1 domainChain NVview chain
1 domainChain Oiview chain
1 domainChain OLview chain
1 domainChain Pjview chain
1 domainChain POview chain
1 domainChain Qbview chain
1 domainChain QZview chain
1 domainChain R3view chain
1 domainChain RFview chain
1 domainChain Snview chain
1 domainChain SPview chain
1 domainChain TIview chain
1 domainChain Toview chain
1 domainChain UCview chain
2 domainsChain VHview chain
1 domainChain WDview chain
1 domainChain XEview chain
1 domainChain YWview chain
1 domainAll Domains (61)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | A4 | e8rdwA41 | A4:1-245 | Ribosomal_S2 | 2007 → 2007.6 → 2007.6.1 |
| 2 | aA | e8rdwaA1 | aA:1-60 | 375.1.1.0 | 375 → 375.1 → 375.1.1 |
| 3 | Af | e8rdwAf1 | Af:1-212 | 1.1.7.0 | 1 → 1.1 → 1.1.7 |
| 4 | Ba | e8rdwBa1 | Ba:1-44 | 3074.1.1.0 | 3074 → 3074.1 → 3074.1.1 |
| 5 | bk | e8rdwbk1 | bk:1-51 | 375.1.1.0 | 375 → 375.1 → 375.1.1 |
| 6 | BQ | e8rdwBQ1 | BQ:1-69 | Ribosomal_S8 | 320 → 320.2 → 320.2.1 |
| 7 | BQ | e8rdwBQ2 | BQ:70-132 | 320.2.1.0 | 320 → 320.2 → 320.2.1 |
| 8 | C1 | e8rdwC11 | C1:1-52 | Ribosomal_L9_N | 4076 → 4076.1 → 4076.1.1 |
| 9 | C1 | e8rdwC12 | C1:53-163 | Ribosomal_L9_C | 523 → 523.1 → 523.1.1 |
| 10 | Cl | e8rdwCl1 | Cl:1-126 | Ribosomal_L2 | 2 → 2.1 → 2.1.1 |
| 11 | Cl | e8rdwCl2 | Cl:127-273 | Ribosomal_L2_C | 4 → 4.1 → 4.1.1 |
| 12 | CT | e8rdwCT1 | CT:1-107 | KH_2 | 327 → 327.11 → 327.11.1 |
| 13 | CT | e8rdwCT2 | CT:108-208 | Ribosomal_S3_C | 230 → 230.2 → 230.2.1 |
| 14 | D | e8rdwD01 | D:1-54 | Ribosomal_L12_N | 156 → 156.1 → 156.1.1 |
| 15 | D | e8rdwD02 | D:55-123 | Ribosomal_L12 | 308 → 308.1 → 308.1.1 |
| 16 | dh | e8rdwdh1 | dh:1-65 | 4281.1.1.0 | 4281 → 4281.1 → 4281.1.1 |
| 17 | Dm | e8rdwDm1 | Dm:1-213 | 221.1.2.0 | 221 → 221.1 → 221.1.2 |
| 18 | E5 | e8rdwE51 | E5:1-82 | Ribosomal_S5 | 3274 → 3274.1 → 3274.1.1 |
| 19 | E5 | e8rdwE52 | E5:83-171 | 212.1.1.0 | 212 → 212.1 → 212.1.1 |
| 20 | E9 | e8rdwE91 | E9:1-200 | 7559.1.1.0 | 7559 → 7559.1 → 7559.1.1 |
| 21 | ep | e8rdwep1 | ep:1-38 | 919.1.1.0 | 919 → 919.1 → 919.1.1 |
| 22 | F | e8rdwF1 | F:1-128 | 212.1.1.0 | 212 → 212.1 → 212.1.1 |
| 23 | F7 | e8rdwF71 | F7:1-178 | 882.1.1.0 | 882 → 882.1 → 882.1.1 |
| 24 | FG | e8rdwFG1 | FG:1-124 | Ribosomal_S6 | 304 → 304.12 → 304.12.1 |
| 25 | fJ | e8rdwfJ1 | fJ:1-91 | Ribosomal_L31 | 4987 → 4987.1 → 4987.1.1 |
| 26 | GR | e8rdwGR1 | GR:1-83 | Ribosomal_L6 | 318 → 318.1 → 318.1.1 |
| 27 | GR | e8rdwGR2 | GR:84-177 | 318.1.1.0 | 318 → 318.1 → 318.1.1 |
| 28 | GS | e8rdwGS1 | GS:1-157 | 167.1.1.0 | 167 → 167.1 → 167.1.1 |
| 29 | H | e8rdwH1 | H:1-205 | GTP_EFTU | 2004 → 2004.1 → 2004.1.1 |
| 30 | H | e8rdwH2 | H:206-303 | GTP_EFTU_D2 | 1 → 1.1 → 1.1.7 |
| 31 | H | e8rdwH3 | H:304-393 | GTP_EFTU_D3 | 1 → 1.1 → 1.1.8 |
| 32 | HK | e8rdwHK1 | HK:1-101 | 377.1.1.0 | 377 → 377.1 → 377.1.1 |
| 33 | IX | e8rdwIX1 | IX:1-142 | 2490.2.1.0 | 2490 → 2490.2 → 2490.2.1 |
| 34 | Je | e8rdwJe1 | Je:1-122 | 3174.1.1.0 | 3174 → 3174.1 → 3174.1.1 |
| 35 | JY | e8rdwJY1 | JY:1-103 | 304.44.1.0 | 304 → 304.44 → 304.44.1 |
| 36 | Kd | e8rdwKd1 | Kd:1-146 | 2490.3.1.0 | 2490 → 2490.3 → 2490.3.1 |
| 37 | KU | e8rdwKU1 | KU:1-129 | 2484.1.1.0 | 2484 → 2484.1 → 2484.1.1 |
| 38 | L6 | e8rdwL61 | L6:1-124 | 2.1.1.0 | 2 → 2.1 → 2.1.1 |
| 39 | Lg | e8rdwLg1 | Lg:1-137 | 325.1.5.0 | 325 → 325.1 → 325.1.5 |
| 40 | MB | e8rdwMB1 | MB:1-119 | 218.3.1.0 | 218 → 218.3 → 218.3.1 |
| 41 | MM | e8rdwMM1 | MM:1-118 | 102.2.1.0 | 102 → 102.2 → 102.2.1 |
| 42 | Nc | e8rdwNc1 | Nc:1-116 | 2484.1.1.0 | 2484 → 2484.1 → 2484.1.1 |
| 43 | NV | e8rdwNV1 | NV:1-71 | 3666.1.1.0 | 3666 → 3666.1 → 3666.1.1 |
| 44 | Oi | e8rdwOi1 | Oi:1-130 | 4.1.1.0 | 4 → 4.1 → 4.1.1 |
| 45 | OL | e8rdwOL1 | OL:1-88 | 616.1.1.0 | 616 → 616.1 → 616.1.1 |
| 46 | Pj | e8rdwPj1 | Pj:1-89 | 837.1.1.0 | 837 → 837.1 → 837.1.1 |
| 47 | PO | e8rdwPO1 | PO:1-118 | 143.2.1.0 | 143 → 143.2 → 143.2.1 |
| 48 | Qb | e8rdwQb1 | Qb:1-103 | 4186.1.1.0 | 4186 → 4186.1 → 4186.1.1 |
| 49 | QZ | e8rdwQZ1 | QZ:1-91 | 2.1.1.0 | 2 → 2.1 → 2.1.1 |
| 50 | R3 | e8rdwR31 | R3:1-76 | 101.1.1.0 | 101 → 101.1 → 101.1.1 |
| 51 | RF | e8rdwRF1 | RF:1-109 | 218.2.1.0 | 218 → 218.2 → 218.2.1 |
| 52 | Sn | e8rdwSn1 | Sn:1-110 | Ribosomal_L23 | 304 → 304.109 → 304.109.1 |
| 53 | SP | e8rdwSP1 | SP:1-91 | 838.1.1.0 | 838 → 838.1 → 838.1.1 |
| 54 | TI | e8rdwTI1 | TI:1-105 | 4.1.1.0 | 4 → 4.1 → 4.1.1 |
| 55 | To | e8rdwTo1 | To:1-88 | 604.9.1.0 | 604 → 604.9 → 604.9.1 |
| 56 | UC | e8rdwUC1 | UC:1-102 | Ribosomal_L25p | 239 → 239.1 → 239.1.1 |
| 57 | UC | e8rdwUC2 | UC:103-215 | Ribosomal_TL5_C | 240 → 240.1 → 240.1.1 |
| 58 | VH | e8rdwVH1 | VH:1-85 | 325.1.8.0 | 325 → 325.1 → 325.1.8 |
| 59 | WD | e8rdwWD1 | WD:1-78 | 4232.1.1.0 | 4232 → 4232.1 → 4232.1.1 |
| 60 | XE | e8rdwXE1 | XE:1-65 | 192.4.1.0 | 192 → 192.4 → 192.4.1 |
| 61 | YW | e8rdwYW1 | YW:1-59 | 887.1.1.0 | 887 → 887.1 → 887.1.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors