PDB 8RO0
0 chains66 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
Chain aview chain
1 domainChain Aview chain
6 domainsChain bview chain
1 domainChain Bview chain
13 domainse8ro0B01(B:97-174,B:513-516,B:525-530,B:550,B:597-598,B:633-640,B:664-668,B:762-766,B:2048-2050)e8ro0B02(B:245-348)e8ro0B03(B:397-461)e8ro0B04(B:462-512,B:517-524,B:531-549,B:551-596,B:599-632,B:641-663,B:669-678)e8ro0B05(B:679-761,B:767-879)e8ro0B06(B:880-985,B:1721-1823)e8ro0B07(B:1118-1173)e8ro0B08(B:1174-1324)e8ro0B09(B:1325-1505)e8ro0B10(B:1506-1720)e8ro0B11(B:1881-1996)e8ro0B12(B:1997-2047,B:2051-2058)e8ro0B13(B:2059-2130)
Chain cview chain
1 domainChain Cview chain
5 domainsChain dview chain
1 domainChain eview chain
1 domainChain Eview chain
1 domainChain fview chain
1 domainChain gview chain
1 domainChain hview chain
1 domainChain iview chain
1 domainChain Iview chain
1 domainChain jview chain
1 domainChain Jview chain
1 domainChain kview chain
1 domainChain lview chain
1 domainChain mview chain
1 domainChain nview chain
1 domainChain Nview chain
1 domainChain oview chain
1 domainChain Oview chain
3 domainsChain pview chain
2 domainsChain qview chain
2 domainsChain Qview chain
4 domainse8ro0Q01(Q:72-430,Q:617-629,Q:746-751,Q:784-785,Q:791-794,Q:801-809,Q:892-897,Q:967-971,Q:993-994,Q:1091-1093,Q:1102-1104,Q:1117-1118)e8ro0Q02(Q:519-616,Q:630-676)e8ro0Q03(Q:732-745,Q:752-783,Q:786-790,Q:795-800,Q:810-891,Q:898-966,Q:972-992,Q:995-1090,Q:1094-1101,Q:1105-1116,Q:1119-1143)e8ro0Q04(Q:1144-1370)
Chain rview chain
2 domainsChain sview chain
2 domainsChain Sview chain
1 domainChain tview chain
2 domainsChain Tview chain
1 domainChain Wview chain
2 domainsChain yview chain
2 domainsAll Domains (66)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | a | e8ro0a01 | a:1-103 | LSM | 4 → 4.1 → 4.1.1 |
| 2 | A | e8ro0A01 | A:39-826,A:1499-1519,A:2007-2024 | PRO8NT,PROCN | 1038 → 1038.1 → 1038.1.1 |
| 3 | A | e8ro0A02 | A:827-1198 | RRM_4 | 304 → 304.48 → 304.48.1 |
| 4 | A | e8ro0A03 | A:1199-1498,A:1520-1554 | U6-snRNA_bdg,U5_2-snRNA_bdg | 4967 → 4967.1 → 4967.1.1 |
| 5 | A | e8ro0A04 | A:1555-1755 | U6-snRNA_bdg | 2008 → 2008.1 → 2008.1.1 |
| 6 | A | e8ro0A05 | A:1756-2006,A:2025 | PRP8_domainIV | 2484 → 2484.1 → 2484.1.1 |
| 7 | A | e8ro0A06 | A:2123-2305 | JAB,PROCT | 2492 → 2492.1 → 2492.1.1 |
| 8 | b | e8ro0b01 | b:1-89 | LSM | 4 → 4.1 → 4.1.1 |
| 9 | B | e8ro0B01 | B:97-174,B:513-516,B:525-530,B:550,B:597-598,B:633-640,B:664-668,B:762-766,B:2048-2050 | BRR2_plug | 592 → 592.6 → 592.6.1 |
| 10 | B | e8ro0B02 | B:245-348 | Helicase_PWI | 592 → 592.1 → 592.1.1 |
| 11 | B | e8ro0B03 | B:397-461 | 1029.1.1.0 | 1029 → 1029.1 → 1029.1.1 |
| 12 | B | e8ro0B04 | B:462-512,B:517-524,B:531-549,B:551-596,B:599-632,B:641-663,B:669-678 | DEAD | 2004 → 2004.1 → 2004.1.1 |
| 13 | B | e8ro0B05 | B:679-761,B:767-879 | Helicase_C | 2004 → 2004.1 → 2004.1.1 |
| 14 | B | e8ro0B06 | B:880-985,B:1721-1823 | SNRNP200_wHTH | 101 → 101.1 → 101.1.2 |
| 15 | B | e8ro0B07 | B:1118-1173 | 102.5.1.0 | 102 → 102.5 → 102.5.1 |
| 16 | B | e8ro0B08 | B:1174-1324 | Sec63 | 11 → 11.1 → 11.1.1 |
| 17 | B | e8ro0B09 | B:1325-1505 | DEAD | 2004 → 2004.1 → 2004.1.1 |
| 18 | B | e8ro0B10 | B:1506-1720 | 2004.1.1.0 | 2004 → 2004.1 → 2004.1.1 |
| 19 | B | e8ro0B11 | B:1881-1996 | Sec63 | 11 → 11.1 → 11.1.1 |
| 20 | B | e8ro0B12 | B:1997-2047,B:2051-2058 | 102.5.1.0 | 102 → 102.5 → 102.5.1 |
| 21 | B | e8ro0B13 | B:2059-2130 | Sec63 | 11 → 11.1 → 11.1.1 |
| 22 | c | e8ro0c01 | c:1-96 | LSM | 4 → 4.1 → 4.1.1 |
| 23 | C | e8ro0C01 | C:177-530,C:538-540,C:585-603,C:675-678,C:740-743 | GTP_EFTU | 2004 → 2004.1 → 2004.1.1 |
| 24 | C | e8ro0C02 | C:531-537,C:541-584,C:604-661 | 1.1.7.0 | 1 → 1.1 → 1.1.7 |
| 25 | C | e8ro0C03 | C:662-674,C:679-732 | 304.24.1.0 | 304 → 304.24 → 304.24.1 |
| 26 | C | e8ro0C04 | C:733-739,C:744-913 | 304.24.1.0 | 304 → 304.24 → 304.24.1 |
| 27 | C | e8ro0C05 | C:914-946 | 304.24.1.0 | 304 → 304.24 → 304.24.1 |
| 28 | d | e8ro0d01 | d:29-118 | 4.1.1.0 | 4 → 4.1 → 4.1.1 |
| 29 | e | e8ro0e01 | e:1-90 | 4.1.1.0 | 4 → 4.1 → 4.1.1 |
| 30 | E | e8ro0E01 | E:73-328 | WD40 | 5 → 5.1 → 5.1.4 |
| 31 | f | e8ro0f01 | f:1-85 | 4.1.1.0 | 4 → 4.1 → 4.1.1 |
| 32 | g | e8ro0g01 | g:1-77 | 4.1.1.0 | 4 → 4.1 → 4.1.1 |
| 33 | h | e8ro0h1 | h:1-103 | LSM | 4 → 4.1 → 4.1.1 |
| 34 | i | e8ro0i1 | i:1-89 | LSM | 4 → 4.1 → 4.1.1 |
| 35 | I | e8ro0I01 | I:44-324,I:350-736 | TPR_8, HAT_Syf1_M, HAT_Syf1_CNRKL1_C, HAT_Syf1_CNRKL1_N, HAT_PRP39_N | 109 → 109.4 → 109.4.1 |
| 36 | j | e8ro0j1 | j:1-96 | LSM | 4 → 4.1 → 4.1.1 |
| 37 | J | e8ro0J01 | J:92-615 | HAT_Syf1_CNRKL1_C | 109 → 109.4 → 109.4.1 |
| 38 | k | e8ro0k1 | k:29-118 | 4.1.1.0 | 4 → 4.1 → 4.1.1 |
| 39 | l | e8ro0l1 | l:1-90 | 4.1.1.0 | 4 → 4.1 → 4.1.1 |
| 40 | m | e8ro0m1 | m:1-85 | 4.1.1.0 | 4 → 4.1 → 4.1.1 |
| 41 | n | e8ro0n1 | n:1-77 | 4.1.1.0 | 4 → 4.1 → 4.1.1 |
| 42 | N | e8ro0N01 | N:1-147 | 3952.1.1.0 | 3952 → 3952.1 → 3952.1.1 |
| 43 | o | e8ro0o01 | o:1-164 | LRR_9 | 207 → 207.1 → 207.1.1 |
| 44 | O | e8ro0O01 | O:30-104,O:143-144 | STL11_N | 376 → 376.1 → 376.1.3 |
| 45 | O | e8ro0O02 | O:105-142,O:145-237 | zf-CCCH_RBM22 | 906 → 906.1 → 906.1.1 |
| 46 | O | e8ro0O03 | O:238-314 | RRM_1 | 304 → 304.9 → 304.9.1 |
| 47 | p | e8ro0p01 | p:1-87 | RRM_1 | 304 → 304.9 → 304.9.1 |
| 48 | p | e8ro0p02 | p:88-97,p:141-142 | 304.9.1.0 | 304 → 304.9 → 304.9.1 |
| 49 | q | e8ro0q01 | q:1-53 | U-box | 376 → 376.1 → 376.1.1 |
| 50 | q | e8ro0q02 | q:185-248,q:309-492 | WD40, Beta-prop_NOL10_N | 5 → 5.1 → 5.1.4 |
| 51 | Q | e8ro0Q01 | Q:72-430,Q:617-629,Q:746-751,Q:784-785,Q:791-794,Q:801-809,Q:892-897,Q:967-971,Q:993-994,Q:1091-1093,Q:1102-1104,Q:1117-1118 | Aquarius_N_1st | 109 → 109.4 → 109.4.1 |
| 52 | Q | e8ro0Q02 | Q:519-616,Q:630-676 | Aquarius_N_2nd | 1 → 1.1 → 1.1.7 |
| 53 | Q | e8ro0Q03 | Q:732-745,Q:752-783,Q:786-790,Q:795-800,Q:810-891,Q:898-966,Q:972-992,Q:995-1090,Q:1094-1101,Q:1105-1116,Q:1119-1143 | ResIII, AAA_11 | 2004 → 2004.1 → 2004.1.1 |
| 54 | Q | e8ro0Q04 | Q:1144-1370 | AAA_12 | 2004 → 2004.1 → 2004.1.1 |
| 55 | r | e8ro0r1 | r:1-53 | U-box | 376 → 376.1 → 376.1.1 |
| 56 | r | e8ro0r2 | r:185-248,r:309-492 | WD40, Beta-prop_NOL10_N | 5 → 5.1 → 5.1.4 |
| 57 | s | e8ro0s1 | s:1-53 | U-box | 376 → 376.1 → 376.1.1 |
| 58 | s | e8ro0s2 | s:185-248,s:309-492 | WD40, Beta-prop_NOL10_N | 5 → 5.1 → 5.1.4 |
| 59 | S | e8ro0S01 | S:1-169 | 75.1.1.0 | 75 → 75.1 → 75.1.1 |
| 60 | t | e8ro0t1 | t:1-53 | U-box | 376 → 376.1 → 376.1.1 |
| 61 | t | e8ro0t2 | t:185-248,t:309-492 | WD40, Beta-prop_NOL10_N | 5 → 5.1 → 5.1.4 |
| 62 | T | e8ro0T01 | T:165-484 | WD40, Beta-prop_NOL10_N | 5 → 5.1 → 5.1.1 |
| 63 | W | e8ro0W01 | W:313-523 | WD40 | 5 → 5.1 → 5.1.4 |
| 64 | W | e8ro0W02 | W:511-567 | WD40 | 5 → 5.1 → 5.1.4 |
| 65 | y | e8ro0y01 | y:1-90,y:139-140 | RRM_1 | 304 → 304.9 → 304.9.1 |
| 66 | y | e8ro0y02 | y:195-298 | Pro_isomerase | 75 → 75.1 → 75.1.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors