PDB 8RO1
0 chains57 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
Chain aview chain
1 domainChain Aview chain
6 domainsChain bview chain
1 domainChain cview chain
1 domainChain Cview chain
5 domainsChain dview chain
1 domainChain DXview chain
4 domainsChain eview chain
1 domainChain Eview chain
1 domainChain fview chain
1 domainChain gview chain
1 domainChain hview chain
1 domainChain iview chain
1 domainChain Iview chain
1 domainChain jview chain
1 domainChain Jview chain
1 domainChain kview chain
1 domainChain lview chain
1 domainChain L2view chain
1 domainChain mview chain
1 domainChain nview chain
1 domainChain Nview chain
1 domainChain oview chain
1 domainChain pview chain
2 domainsChain qview chain
2 domainsChain Qview chain
4 domainse8ro1Q1(Q:72-430,Q:617-629,Q:746-751,Q:784-785,Q:791-794,Q:801-809,Q:892-897,Q:967-971,Q:993-994,Q:1091-1093,Q:1102-1104,Q:1117-1118)e8ro1Q2(Q:519-616,Q:630-676)e8ro1Q3(Q:732-745,Q:752-783,Q:786-790,Q:795-800,Q:810-891,Q:898-966,Q:972-992,Q:995-1090,Q:1094-1101,Q:1105-1116,Q:1119-1143)e8ro1Q4(Q:1144-1370)
Chain rview chain
2 domainsChain sview chain
2 domainsChain Sview chain
1 domainChain tview chain
2 domainsChain Tview chain
1 domainChain Wview chain
2 domainsChain yview chain
1 domainAll Domains (57)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | a | e8ro1a1 | a:1-103 | LSM | 4 → 4.1 → 4.1.1 |
| 2 | A | e8ro1A1 | A:39-826,A:1499-1519,A:2007-2024 | PRO8NT,PROCN | 1038 → 1038.1 → 1038.1.1 |
| 3 | A | e8ro1A2 | A:827-1198 | RRM_4 | 304 → 304.48 → 304.48.1 |
| 4 | A | e8ro1A3 | A:1199-1498,A:1520-1554 | U6-snRNA_bdg,U5_2-snRNA_bdg | 4967 → 4967.1 → 4967.1.1 |
| 5 | A | e8ro1A4 | A:1555-1755 | U6-snRNA_bdg | 2008 → 2008.1 → 2008.1.1 |
| 6 | A | e8ro1A5 | A:1756-2006,A:2025-2025 | PRP8_domainIV | 2484 → 2484.1 → 2484.1.1 |
| 7 | A | e8ro1A6 | A:2123-2305 | JAB,PROCT | 2492 → 2492.1 → 2492.1.1 |
| 8 | b | e8ro1b1 | b:1-89 | LSM | 4 → 4.1 → 4.1.1 |
| 9 | c | e8ro1c1 | c:1-96 | LSM | 4 → 4.1 → 4.1.1 |
| 10 | C | e8ro1C1 | C:177-530,C:538-540,C:585-603,C:675-678,C:740-743 | GTP_EFTU | 2004 → 2004.1 → 2004.1.1 |
| 11 | C | e8ro1C2 | C:531-537,C:541-584,C:604-661 | 1.1.7.0 | 1 → 1.1 → 1.1.7 |
| 12 | C | e8ro1C3 | C:662-674,C:679-732 | 304.24.1.0 | 304 → 304.24 → 304.24.1 |
| 13 | C | e8ro1C4 | C:733-739,C:744-913 | EFG_C | 304 → 304.24 → 304.24.1 |
| 14 | C | e8ro1C5 | C:914-946 | 304.24.1.0 | 304 → 304.24 → 304.24.1 |
| 15 | d | e8ro1d1 | d:29-118 | 4.1.1.0 | 4 → 4.1 → 4.1.1 |
| 16 | DX | e8ro1DX01 | DX:68-267,DX:352-357,DX:546-550 | DEAD | 2004 → 2004.1 → 2004.1.1 |
| 17 | DX | e8ro1DX02 | DX:268-351,DX:358-474,DX:642-672 | Helicase_C | 2004 → 2004.1 → 2004.1.1 |
| 18 | DX | e8ro1DX03 | DX:475-545,DX:551-641 | HA2_N,HA2_C | 4156 → 4156.1 → 4156.1.1 |
| 19 | DX | e8ro1DX04 | DX:673-710 | OB_NTP_bind | 4156 → 4156.1 → 4156.1.1 |
| 20 | e | e8ro1e1 | e:1-90 | 4.1.1.0 | 4 → 4.1 → 4.1.1 |
| 21 | E | e8ro1E1 | E:73-328 | WD40 | 5 → 5.1 → 5.1.4 |
| 22 | f | e8ro1f1 | f:1-85 | 4.1.1.0 | 4 → 4.1 → 4.1.1 |
| 23 | g | e8ro1g1 | g:1-77 | 4.1.1.0 | 4 → 4.1 → 4.1.1 |
| 24 | h | e8ro1h1 | h:1-103 | LSM | 4 → 4.1 → 4.1.1 |
| 25 | i | e8ro1i1 | i:1-89 | LSM | 4 → 4.1 → 4.1.1 |
| 26 | I | e8ro1I1 | I:44-324,I:350-736 | TPR_8, HAT_Syf1_M, HAT_Syf1_CNRKL1_C, HAT_Syf1_CNRKL1_N, HAT_PRP39_N | 109 → 109.4 → 109.4.1 |
| 27 | j | e8ro1j1 | j:1-96 | LSM | 4 → 4.1 → 4.1.1 |
| 28 | J | e8ro1J1 | J:92-615 | HAT_Syf1_CNRKL1_C | 109 → 109.4 → 109.4.1 |
| 29 | k | e8ro1k1 | k:29-118 | 4.1.1.0 | 4 → 4.1 → 4.1.1 |
| 30 | l | e8ro1l1 | l:1-90 | 4.1.1.0 | 4 → 4.1 → 4.1.1 |
| 31 | L2 | e8ro1L201 | L2:236-450 | CwfJ_C_2,CwfJ_C_1 | 312 → 312.1 → 312.1.1 |
| 32 | m | e8ro1m1 | m:1-85 | 4.1.1.0 | 4 → 4.1 → 4.1.1 |
| 33 | n | e8ro1n1 | n:1-77 | 4.1.1.0 | 4 → 4.1 → 4.1.1 |
| 34 | N | e8ro1N1 | N:1-147 | 3952.1.1.0 | 3952 → 3952.1 → 3952.1.1 |
| 35 | o | e8ro1o1 | o:1-164 | LRR_9 | 207 → 207.1 → 207.1.1 |
| 36 | O | e8ro1O1 | O:30-104,O:143-144 | STL11_N | 376 → 376.1 → 376.1.3 |
| 37 | O | e8ro1O2 | O:105-142,O:145-237 | zf-CCCH_RBM22 | 906 → 906.1 → 906.1.1 |
| 38 | O | e8ro1O3 | O:238-314 | RRM_1 | 304 → 304.9 → 304.9.1 |
| 39 | p | e8ro1p1 | p:1-87 | RRM_1 | 304 → 304.9 → 304.9.1 |
| 40 | p | e8ro1p2 | p:88-97,p:141-142,p:195-238 | 304.9.1.0 | 304 → 304.9 → 304.9.1 |
| 41 | q | e8ro1q1 | q:1-53 | U-box | 376 → 376.1 → 376.1.1 |
| 42 | q | e8ro1q2 | q:185-248,q:309-492 | WD40, Beta-prop_NOL10_N | 5 → 5.1 → 5.1.4 |
| 43 | Q | e8ro1Q1 | Q:72-430,Q:617-629,Q:746-751,Q:784-785,Q:791-794,Q:801-809,Q:892-897,Q:967-971,Q:993-994,Q:1091-1093,Q:1102-1104,Q:1117-1118 | Aquarius_N_1st | 109 → 109.4 → 109.4.1 |
| 44 | Q | e8ro1Q2 | Q:519-616,Q:630-676 | Aquarius_N_2nd | 1 → 1.1 → 1.1.7 |
| 45 | Q | e8ro1Q3 | Q:732-745,Q:752-783,Q:786-790,Q:795-800,Q:810-891,Q:898-966,Q:972-992,Q:995-1090,Q:1094-1101,Q:1105-1116,Q:1119-1143 | ResIII, AAA_11 | 2004 → 2004.1 → 2004.1.1 |
| 46 | Q | e8ro1Q4 | Q:1144-1370 | AAA_12 | 2004 → 2004.1 → 2004.1.1 |
| 47 | r | e8ro1r1 | r:1-53 | U-box | 376 → 376.1 → 376.1.1 |
| 48 | r | e8ro1r2 | r:185-248,r:309-492 | WD40, Beta-prop_NOL10_N | 5 → 5.1 → 5.1.4 |
| 49 | s | e8ro1s1 | s:1-53 | U-box | 376 → 376.1 → 376.1.1 |
| 50 | s | e8ro1s2 | s:185-248,s:309-492 | WD40, Beta-prop_NOL10_N | 5 → 5.1 → 5.1.4 |
| 51 | S | e8ro1S1 | S:1-169 | 75.1.1.0 | 75 → 75.1 → 75.1.1 |
| 52 | t | e8ro1t1 | t:1-53 | U-box | 376 → 376.1 → 376.1.1 |
| 53 | t | e8ro1t2 | t:185-248,t:309-492 | WD40, Beta-prop_NOL10_N | 5 → 5.1 → 5.1.4 |
| 54 | T | e8ro1T1 | T:165-484 | WD40, Beta-prop_NOL10_N | 5 → 5.1 → 5.1.1 |
| 55 | W | e8ro1W1 | W:313-523 | WD40 | 5 → 5.1 → 5.1.4 |
| 56 | W | e8ro1W2 | W:511-567 | WD40 | 5 → 5.1 → 5.1.4 |
| 57 | y | e8ro1y01 | y:10-88 | 304.9.1.0 | 304 → 304.9 → 304.9.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors