PDB 8S51
ELECTRON MICROSCOPY0 chains44 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
Chain Aview chain
7 domainsChain Bview chain
7 domainse8s51B01(B:56-208,B:225-229,B:247-254,B:405-540,B:546-547,B:551-559,B:604-610,B:625-631,B:660-667,B:685-690,B:839-842,B:871-876,B:881-887,B:896,B:910)e8s51B02(B:209-224,B:230-246,B:255-404)e8s51B03(B:541-545,B:548-550,B:560-603,B:611-624,B:632-652)e8s51B04(B:653-659,B:668-684,B:691-781)e8s51B05(B:782-817,B:943-1068)e8s51B06(B:818-838,B:843-870,B:877-880,B:888-895,B:897-909,B:911-942)e8s51B07(B:1069-1123)
Chain Cview chain
2 domainsChain Dview chain
1 domainChain Eview chain
2 domainsChain Fview chain
1 domainChain Gview chain
2 domainsChain Hview chain
1 domainChain Iview chain
2 domainsChain Jview chain
1 domainChain Kview chain
1 domainChain Lview chain
1 domainChain Mview chain
3 domainsChain Oview chain
2 domainsChain Qview chain
1 domainChain Rview chain
2 domainsChain Uview chain
2 domainsChain Vview chain
2 domainsChain Wview chain
2 domainsChain Xview chain
2 domainsAll Domains (44)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | A | e8s51A1 | A:686-894 | RNA_pol_Rpb1_5,RNA_pol_Rpb1_4 | 4958 → 4958.1 → 4958.1.1 |
| 2 | A | e8s51A2 | A:895-1082 | RNA_pol_Rpb1_6 | 4957 → 4957.1 → 4957.1.1 |
| 3 | A | e8s51A3 | A:534-685 | RNA_pol_Rpb1_3 | 4959 → 4959.1 → 4959.1.1 |
| 4 | A | e8s51A4 | A:1152-1308 | RNA_pol_Rpb1_7 | 4955 → 4955.1 → 4955.1.1 |
| 5 | A | e8s51A5 | A:364-533 | RNA_pol_Rpb1_2 | 1 → 1.1 → 1.1.2 |
| 6 | A | e8s51A6 | A:1083-1135,A:1361-1415,A:1469-1484 | RNA_pol_Rpb1_5 | 4954 → 4954.1 → 4954.1.1 |
| 7 | A | e8s51A7 | A:1136-1151,A:1309-1360 | 4956.1.1.0 | 4956 → 4956.1 → 4956.1.1 |
| 8 | B | e8s51B01 | B:56-208,B:225-229,B:247-254,B:405-540,B:546-547,B:551-559,B:604-610,B:625-631,B:660-667,B:685-690,B:839-842,B:871-876,B:881-887,B:896,B:910 | RNA_pol_Rpb2_1,RNA_pol_Rpb2_3 | 4010 → 4010.1 → 4010.1.1 |
| 9 | B | e8s51B02 | B:209-224,B:230-246,B:255-404 | RNA_pol_Rpb2_2 | 4041 → 4041.1 → 4041.1.1 |
| 10 | B | e8s51B03 | B:541-545,B:548-550,B:560-603,B:611-624,B:632-652 | RNA_pol_Rpb2_4 | 4961 → 4961.1 → 4961.1.1 |
| 11 | B | e8s51B04 | B:653-659,B:668-684,B:691-781 | RNA_pol_Rpb2_6,RNA_pol_Rpb2_5 | 4042 → 4042.1 → 4042.1.1 |
| 12 | B | e8s51B05 | B:782-817,B:943-1068 | RNA_pol_Rpb2_6 | 1 → 1.1 → 1.1.2 |
| 13 | B | e8s51B06 | B:818-838,B:843-870,B:877-880,B:888-895,B:897-909,B:911-942 | RNA_pol_Rpb2_6 | 1 → 1.1 → 1.1.2 |
| 14 | B | e8s51B07 | B:1069-1123 | RNA_pol_Rpb2_7 | 4043 → 4043.1 → 4043.1.1 |
| 15 | C | e8s51C1 | C:2-42,C:179-271 | RNA_pol_L | 305 → 305.1 → 305.1.1 |
| 16 | C | e8s51C2 | C:43-178 | RNA_pol_A_bac | 240 → 240.2 → 240.2.1 |
| 17 | D | e8s51D1 | D:60-180 | RNA_pol_Rpb4 | 102 → 102.1 → 102.1.1 |
| 18 | E | e8s51E1 | E:139-210 | RNA_pol_Rpb5_C | 840 → 840.1 → 840.1.1 |
| 19 | E | e8s51E2 | E:2-138 | RNA_pol_Rpb5_N | 2008 → 2008.3 → 2008.3.1 |
| 20 | F | e8s51F1 | F:46-127 | RNA_pol_Rpb6 | 152 → 152.1 → 152.1.1 |
| 21 | G | e8s51G1 | G:79-171 | S1 | 2 → 2.1 → 2.1.1 |
| 22 | G | e8s51G2 | G:1-77 | SHS2_Rpb7-N | 872 → 872.1 → 872.1.1 |
| 23 | H | e8s51H1 | H:1-150 | RNA_pol_Rpb8 | 2 → 2.1 → 2.1.1 |
| 24 | I | e8s51I1 | I:1-59 | RNA_POL_M_15KD | 375 → 375.1 → 375.1.1 |
| 25 | I | e8s51I2 | I:60-125 | TFIIS_C | 375 → 375.1 → 375.1.1 |
| 26 | J | e8s51J1 | J:1-67 | RNA_pol_N | 101 → 101.4 → 101.4.1 |
| 27 | K | e8s51K1 | K:1-115 | RNA_pol_L_2 | 305 → 305.1 → 305.1.1 |
| 28 | L | e8s51L1 | L:15-58 | DNA_RNApol_7kD | 375 → 375.1 → 375.1.1 |
| 29 | M | e8s51M1 | M:208-316 | TFIIB | 101 → 101.1 → 101.1.10 |
| 30 | M | e8s51M2 | M:105-207 | TFIIB | 101 → 101.1 → 101.1.10 |
| 31 | M | e8s51M3 | M:7-54 | TF_Zn_Ribbon | 375 → 375.1 → 375.1.1 |
| 32 | O | e8s51O1 | O:159-255 | TBP | 331 → 331.1 → 331.1.1 |
| 33 | O | e8s51O2 | O:256-338 | TBP | 331 → 331.1 → 331.1.1 |
| 34 | Q | e8s51Q1 | Q:5-54,Q:93-180 | TFIIF_alpha | 59 → 59.1 → 59.1.1 |
| 35 | R | e8s51R1 | R:2-119 | TFIIF_beta_N | 59 → 59.1 → 59.1.1 |
| 36 | R | e8s51R2 | R:175-238 | TFIIF_beta | 101 → 101.1 → 101.1.2 |
| 37 | U | e8s51U1 | U:322-376 | TFIIA | 74 → 74.1 → 74.1.1 |
| 38 | U | e8s51U2 | U:9-51,U:308-321 | TFIIA | 104 → 104.1 → 104.1.1 |
| 39 | V | e8s51V1 | V:1-53 | TFIIA_gamma_N | 104 → 104.1 → 104.1.1 |
| 40 | V | e8s51V2 | V:54-99 | TFIIA_gamma_C | 74 → 74.1 → 74.1.1 |
| 41 | W | e8s51W1 | W:101-174 | TF_Zn_Ribbon | 375 → 375.1 → 375.1.1 |
| 42 | W | e8s51W2 | W:11-100,W:175-204 | TFIIE_alpha | 101 → 101.1 → 101.1.2 |
| 43 | X | e8s51X1 | X:147-206 | TFA2_Winged_2 | 101 → 101.1 → 101.1.2 |
| 44 | X | e8s51X2 | X:75-146 | TFIIE_beta | 101 → 101.1 → 101.1.2 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors