PDB 8U9X
0 chains30 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
Chain Aview chain
9 domainse8u9xA01(A:1-233,A:269-409)e8u9xA02(A:410-437,A:512-584)e8u9xA03(A:438-511)e8u9xA04(A:585-730)e8u9xA05(A:731-874)e8u9xA06(A:1033-1065)e8u9xA07(A:1066-1115,A:1153-1167,A:1177-1195,A:1226-1229,A:1237-1241,A:1254-1259,A:1287-1299,A:1337-1439)e8u9xA08(A:1116-1147,A:1281-1286,A:1300-1336)e8u9xA09(A:1148-1152,A:1168-1176,A:1196-1225,A:1230-1236,A:1242-1253,A:1260-1280)
Chain Bview chain
7 domainsChain Cview chain
2 domainsChain Dview chain
1 domainChain Eview chain
2 domainsChain Fview chain
1 domainChain Gview chain
2 domainsChain Hview chain
1 domainChain Iview chain
2 domainsChain Jview chain
1 domainChain Kview chain
1 domainChain Lview chain
1 domainAll Domains (30)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | A | e8u9xA01 | A:1-233,A:269-409 | RNA_pol_Rpb1_2, RNA_pol_Rpb1_1 | 4246 → 4246.1 → 4246.1.1 |
| 2 | A | e8u9xA02 | A:410-437,A:512-584 | RNA_pol_Rpb1_3 | 1 → 1.1 → 1.1.2 |
| 3 | A | e8u9xA03 | A:438-511 | RNA_pol_Rpb1_2 | 1 → 1.1 → 1.1.2 |
| 4 | A | e8u9xA04 | A:585-730 | RNA_pol_Rpb1_3 | 4959 → 4959.1 → 4959.1.1 |
| 5 | A | e8u9xA05 | A:731-874 | RNA_pol_Rpb1_5,RNA_pol_Rpb1_4 | 4958 → 4958.1 → 4958.1.1 |
| 6 | A | e8u9xA06 | A:1033-1065 | RNA_pol_Rpb1_6 | 4957 → 4957.1 → 4957.1.1 |
| 7 | A | e8u9xA07 | A:1066-1115,A:1153-1167,A:1177-1195,A:1226-1229,A:1237-1241,A:1254-1259,A:1287-1299,A:1337-1439 | RNA_pol_Rpb1_7, RNA_pol_Rpb1_5 | 275 → 275.1 → 275.1.1 |
| 8 | A | e8u9xA08 | A:1116-1147,A:1281-1286,A:1300-1336 | RNA_pol_Rpb1_5 | 275 → 275.1 → 275.1.1 |
| 9 | A | e8u9xA09 | A:1148-1152,A:1168-1176,A:1196-1225,A:1230-1236,A:1242-1253,A:1260-1280 | RNA_pol_Rpb1_7 | 4955 → 4955.1 → 4955.1.1 |
| 10 | B | e8u9xB1 | B:1098-1224 | RNA_pol_Rpb2_6,RNA_pol_Rpb2_7 | 4043 → 4043.1 → 4043.1.1 |
| 11 | B | e8u9xB2 | B:542-630 | RNA_pol_Rpb2_4 | 4961 → 4961.1 → 4961.1.1 |
| 12 | B | e8u9xB3 | B:631-813 | 4042.1.1.0 | 4042 → 4042.1 → 4042.1.1 |
| 13 | B | e8u9xB4 | B:20-138,B:164-218,B:405-541 | RNA_pol_Rpb2_1,RNA_pol_Rpb2_3 | 4010 → 4010.1 → 4010.1.1 |
| 14 | B | e8u9xB5 | B:219-404 | RNA_pol_Rpb2_2 | 4041 → 4041.1 → 4041.1.1 |
| 15 | B | e8u9xB6 | B:814-850,B:975-1097 | RNA_pol_Rpb2_6 | 1 → 1.1 → 1.1.2 |
| 16 | B | e8u9xB7 | B:851-974 | RNA_pol_Rpb2_6 | 325 → 325.1 → 325.1.7 |
| 17 | C | e8u9xC1 | C:3-41,C:173-268 | RNA_pol_L | 305 → 305.1 → 305.1.1 |
| 18 | C | e8u9xC2 | C:42-172 | RNA_pol_A_bac | 240 → 240.2 → 240.2.1 |
| 19 | D | e8u9xD1 | D:10-24,D:140-221 | RNA_pol_Rpb4 | 102 → 102.1 → 102.1.1 |
| 20 | E | e8u9xE1 | E:144-215 | RNA_pol_Rpb5_C | 840 → 840.1 → 840.1.1 |
| 21 | E | e8u9xE2 | E:5-143 | RNA_pol_Rpb5_N | 2008 → 2008.3 → 2008.3.1 |
| 22 | F | e8u9xF1 | F:72-155 | RNA_pol_Rpb6 | 152 → 152.1 → 152.1.1 |
| 23 | G | e8u9xG1 | G:81-169 | S1 | 2 → 2.1 → 2.1.1 |
| 24 | G | e8u9xG2 | G:1-80 | SHS2_Rpb7-N | 872 → 872.1 → 872.1.1 |
| 25 | H | e8u9xH1 | H:2-146 | RNA_pol_Rpb8 | 2 → 2.1 → 2.1.1 |
| 26 | I | e8u9xI1 | I:1-49 | RNA_POL_M_15KD | 375 → 375.1 → 375.1.1 |
| 27 | I | e8u9xI2 | I:50-121 | TFIIS_C | 375 → 375.1 → 375.1.1 |
| 28 | J | e8u9xJ1 | J:1-65 | RNA_pol_N | 101 → 101.4 → 101.4.1 |
| 29 | K | e8u9xK1 | K:1-114 | RNA_pol_L_2 | 305 → 305.1 → 305.1.1 |
| 30 | L | e8u9xL1 | L:25-70 | DNA_RNApol_7kD | 375 → 375.1 → 375.1.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors