PDB 8WA1
ELECTRON MICROSCOPY0 chains35 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
Chain Bview chain
7 domainsChain cview chain
5 domainsChain Eview chain
1 domainChain Gview chain
2 domainsChain Iview chain
1 domainChain Jview chain
2 domainsChain Lview chain
2 domainsChain mview chain
1 domainChain Mview chain
1 domainChain Nview chain
3 domainsChain Pview chain
1 domainAll Domains (35)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | a | e8wa1a1 | a:29-58,a:178-218 | RNA_pol_L | 305 → 305.1 → 305.1.1 |
| 2 | a | e8wa1a2 | a:59-177 | RNA_pol_A_bac | 240 → 240.2 → 240.2.1 |
| 3 | a | e8wa1a3 | a:274-326 | RNA_pol_A_CTD | 102 → 102.1 → 102.1.1 |
| 4 | A | e8wa1A1 | A:29-58,A:178-218 | RNA_pol_L | 305 → 305.1 → 305.1.1 |
| 5 | A | e8wa1A2 | A:59-177 | RNA_pol_A_bac | 240 → 240.2 → 240.2.1 |
| 6 | A | e8wa1A3 | A:274-326 | RNA_pol_A_CTD | 102 → 102.1 → 102.1.1 |
| 7 | B | e8wa1B1 | B:1-129,B:197-202,B:351-352,B:426-551,B:746-747 | RNA_pol_Rpb2_1 | 4010 → 4010.1 → 4010.1.1 |
| 8 | B | e8wa1B2 | B:130-196,B:203-207,B:309-350,B:353-425 | 4010.1.1.0 | 4010 → 4010.1 → 4010.1.1 |
| 9 | B | e8wa1B3 | B:552-679 | RNA_pol_Rpb2_6 | 1 → 1.1 → 1.1.2 |
| 10 | B | e8wa1B4 | B:680-745,B:748-758 | RNA_pol_Rpb2_6 | 1 → 1.1 → 1.1.2 |
| 11 | B | e8wa1B5 | B:759-803 | 1.1.2.0 | 1 → 1.1 → 1.1.2 |
| 12 | B | e8wa1B6 | B:804-954 | RNA_pol_Rpb2_6 | 1 → 1.1 → 1.1.2 |
| 13 | B | e8wa1B7 | B:946-1054 | RNA_pol_Rpb2_6,RNA_pol_Rpb2_7 | 4043 → 4043.1 → 4043.1.1 |
| 14 | c | e8wa1c1 | c:1-73,c:344-345,c:352-355,c:365-365,c:374-375 | RNA_pol_Rpb1_3 | 1 → 1.1 → 1.1.2 |
| 15 | c | e8wa1c2 | c:74-237 | RNA_pol_Rpb1_5,RNA_pol_Rpb1_4 | 4958 → 4958.1 → 4958.1.1 |
| 16 | c | e8wa1c3 | c:238-343,c:346-351,c:356-364,c:366-373,c:376-392 | RNA_pol_Rpb1_5 | 275 → 275.1 → 275.1.1 |
| 17 | c | e8wa1c4 | c:393-418 | 275.1.1.0 | 275 → 275.1 → 275.1.1 |
| 18 | c | e8wa1c5 | c:1143-1327 | RNA_pol_Rpb1_5 | 275 → 275.1 → 275.1.1 |
| 19 | C | e8wa1C1 | C:1-377 | RNA_pol_Rpb1_1 | 4246 → 4246.1 → 4246.1.1 |
| 20 | C | e8wa1C2 | C:378-421,C:462-542 | RNA_pol_Rpb1_2 | 1 → 1.1 → 1.1.2 |
| 21 | C | e8wa1C3 | C:422-461 | 4951.1.1.0 | 4951 → 4951.1 → 4951.1.1 |
| 22 | E | e8wa1E1 | E:74-696 | PPR, PPR_2, PPR_3, PPR_long, TPR_24 | 109 → 109.4 → 109.4.1 |
| 23 | G | e8wa1G1 | G:65-152 | Sod_Fe_N | 192 → 192.3 → 192.3.1 |
| 24 | G | e8wa1G2 | G:153-255 | Sod_Fe_C | 228 → 228.1 → 228.1.1 |
| 25 | I | e8wa1I1 | I:158-472 | PfkB | 2003 → 2003.6 → 2003.6.1 |
| 26 | J | e8wa1J1 | J:123-365 | SET | 70 → 70.3 → 70.3.1 |
| 27 | J | e8wa1J2 | J:366-506 | Rubis-subs-bind | 630 → 630.1 → 630.1.1 |
| 28 | L | e8wa1L1 | L:61-147 | Sod_Fe_N | 192 → 192.3 → 192.3.1 |
| 29 | L | e8wa1L2 | L:148-267 | Sod_Fe_C | 228 → 228.1 → 228.1.1 |
| 30 | m | e8wa1m1 | m:83-164 | Thioredoxin | 2485 → 2485.1 → 2485.1.1 |
| 31 | M | e8wa1M1 | M:83-164 | Thioredoxin | 2485 → 2485.1 → 2485.1.1 |
| 32 | N | e8wa1N1 | N:253-338 | Mur_ligase | 2493 → 2493.1 → 2493.1.1 |
| 33 | N | e8wa1N2 | N:339-574 | Mur_ligase_M | 2004 → 2004.1 → 2004.1.1 |
| 34 | N | e8wa1N3 | N:575-728 | Mur_ligase_C | 7570 → 7570.1 → 7570.1.1 |
| 35 | P | e8wa1P1 | P:63-130 | Cupin_3 | 10 → 10.12 → 10.12.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors