PDB 8XGC
ELECTRON MICROSCOPY0 chains72 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
Chain 2view chain
5 domainsChain 3view chain
5 domainsChain 4view chain
5 domainsChain 5view chain
5 domainsChain 6view chain
5 domainsChain 7view chain
5 domainsChain 8view chain
10 domainse8xgc81(8:121-135,8:159-164,8:248-275,8:280-286,8:297-298,8:328-341,8:355-357,8:434-435,8:449-449,8:535-537,8:551-552,8:814-815,8:890-895,8:902-906,8:938-949,8:2122-2124)e8xgc82(8:136-158,8:165-203,8:231-247)e8xgc83(8:276-279,8:287-296,8:299-327,8:342-354,8:358-433,8:436-448,8:450-510)e8xgc84(8:511-534,8:538-550,8:553-581)e8xgc85(8:779-794,8:840-889,8:896-901,8:907-937,8:950-985)e8xgc86(8:795-813,8:816-839)e8xgc87(8:986-1187)e8xgc88(8:1671-1921)e8xgc89(8:2108-2121,8:2125-2168)e8xgc810(8:2169-2214)
Chain Aview chain
2 domainsChain Bview chain
2 domainsChain Cview chain
2 domainsChain Dview chain
2 domainsChain Eview chain
3 domainsChain Fview chain
2 domainsChain Gview chain
2 domainsChain Hview chain
2 domainsChain Lview chain
3 domainsChain Nview chain
1 domainChain Oview chain
1 domainChain Pview chain
1 domainChain Qview chain
1 domainChain Rview chain
1 domainChain Sview chain
1 domainAll Domains (72)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | 2 | e8xgc21 | 2:756-864 | MCM_lid | 148 → 148.1 → 148.1.3 |
| 2 | 2 | e8xgc22 | 2:201-299 | MCM_N | 3003 → 3003.1 → 3003.1.1 |
| 3 | 2 | e8xgc23 | 2:300-332,2:384-460 | MCM_OB | 2 → 2.1 → 2.1.1 |
| 4 | 2 | e8xgc24 | 2:461-706 | MCM, Mg_chelatase | 2004 → 2004.1 → 2004.1.1 |
| 5 | 2 | e8xgc25 | 2:333-383 | 375.1.1.0 | 375 → 375.1 → 375.1.1 |
| 6 | 3 | e8xgc31 | 3:339-570 | MCM, Mg_chelatase | 2004 → 2004.1 → 2004.1.1 |
| 7 | 3 | e8xgc32 | 3:162-194,3:252-338 | MCM_OB | 2 → 2.1 → 2.1.1 |
| 8 | 3 | e8xgc33 | 3:195-251 | 375.1.1.0 | 375 → 375.1 → 375.1.1 |
| 9 | 3 | e8xgc34 | 3:13-58,3:96-161 | MCM_N | 3003 → 3003.1 → 3003.1.1 |
| 10 | 3 | e8xgc35 | 3:651-738 | MCM_lid | 148 → 148.1 → 148.1.3 |
| 11 | 4 | e8xgc41 | 4:308-340,4:393-471 | MCM_OB | 2 → 2.1 → 2.1.1 |
| 12 | 4 | e8xgc42 | 4:177-307 | MCM_N | 3003 → 3003.1 → 3003.1.1 |
| 13 | 4 | e8xgc43 | 4:341-392 | MCM_OB | 375 → 375.1 → 375.1.1 |
| 14 | 4 | e8xgc44 | 4:472-742 | MCM, Mg_chelatase | 2004 → 2004.1 → 2004.1.1 |
| 15 | 4 | e8xgc45 | 4:743-838 | MCM_lid | 148 → 148.1 → 148.1.3 |
| 16 | 5 | e8xgc51 | 5:175-211,5:235-251 | 375.1.1.0 | 375 → 375.1 → 375.1.1 |
| 17 | 5 | e8xgc52 | 5:27-110,5:130-141 | MCM_N | 3003 → 3003.1 → 3003.1.1 |
| 18 | 5 | e8xgc53 | 5:142-174,5:252-340 | MCM_OB | 2 → 2.1 → 2.1.1 |
| 19 | 5 | e8xgc54 | 5:336-572 | MCM, Mg_chelatase | 2004 → 2004.1 → 2004.1.1 |
| 20 | 5 | e8xgc55 | 5:573-693 | MCM_lid | 148 → 148.1 → 148.1.3 |
| 21 | 6 | e8xgc61 | 6:103-194,6:260-269 | MCM_N | 3003 → 3003.1 → 3003.1.1 |
| 22 | 6 | e8xgc62 | 6:303-354 | MCM_OB | 375 → 375.1 → 375.1.1 |
| 23 | 6 | e8xgc63 | 6:456-463,6:510-745 | MCM | 2004 → 2004.1 → 2004.1.1 |
| 24 | 6 | e8xgc64 | 6:746-840 | MCM_lid | 148 → 148.1 → 148.1.3 |
| 25 | 6 | e8xgc65 | 6:270-302,6:355-400,6:421-455 | MCM_OB | 2 → 2.1 → 2.1.1 |
| 26 | 7 | e8xgc71 | 7:223-253,7:309-383 | MCM_OB | 2 → 2.1 → 2.1.1 |
| 27 | 7 | e8xgc72 | 7:12-28,7:62-222 | MCM_N | 3003 → 3003.1 → 3003.1.1 |
| 28 | 7 | e8xgc73 | 7:254-308 | 375.1.1.0 | 375 → 375.1 → 375.1.1 |
| 29 | 7 | e8xgc74 | 7:384-643 | MCM, Mg_chelatase | 2004 → 2004.1 → 2004.1.1 |
| 30 | 7 | e8xgc75 | 7:644-729 | MCM_lid | 148 → 148.1 → 148.1.3 |
| 31 | 8 | e8xgc81 | 8:121-135,8:159-164,8:248-275,8:280-286,8:297-298,8:328-341,8:355-357,8:434-435,8:449-449,8:535-537,8:551-552,8:814-815,8:890-895,8:902-906,8:938-949,8:2122-2124 | 2.1.1.0 | 2 → 2.1 → 2.1.1 |
| 32 | 8 | e8xgc82 | 8:136-158,8:165-203,8:231-247 | 304.114.1.0 | 304 → 304.114 → 304.114.1 |
| 33 | 8 | e8xgc83 | 8:276-279,8:287-296,8:299-327,8:342-354,8:358-433,8:436-448,8:450-510 | DNA_pol_B_exo1 | 2 → 2.1 → 2.1.1 |
| 34 | 8 | e8xgc84 | 8:511-534,8:538-550,8:553-581 | 304.48.1.0 | 304 → 304.48 → 304.48.1 |
| 35 | 8 | e8xgc85 | 8:779-794,8:840-889,8:896-901,8:907-937,8:950-985 | 304.48.1.0 | 304 → 304.48 → 304.48.1 |
| 36 | 8 | e8xgc86 | 8:795-813,8:816-839 | DNA_pol_B | 4970 → 4970.1 → 4970.1.1 |
| 37 | 8 | e8xgc87 | 8:986-1187 | POL2_thumb | 4969 → 4969.1 → 4969.1.1 |
| 38 | 8 | e8xgc88 | 8:1671-1921 | DUF1744 | 304 → 304.48 → 304.48.1 |
| 39 | 8 | e8xgc89 | 8:2108-2121,8:2125-2168 | zf_DPOE_2 | 375 → 375.10 → 375.10.1 |
| 40 | 8 | e8xgc810 | 8:2169-2214 | zf-DPOE | 375 → 375.10 → 375.10.1 |
| 41 | 9 | e8xgc91 | 9:204-233,9:266-348 | PF29084 | 2 → 2.1 → 2.1.1 |
| 42 | 9 | e8xgc92 | 9:170-203,9:349-556,9:598-688 | DNA_pol_E_B | 246 → 246.2 → 246.2.1 |
| 43 | A | e8xgcA1 | A:1-159 | Sld5 | 4163 → 4163.1 → 4163.1.1 |
| 44 | A | e8xgcA2 | A:158-208 | PSF1_C | 4076 → 4076.3 → 4076.3.1 |
| 45 | B | e8xgcB01 | B:1-90 | PSF2_N | 4076 → 4076.3 → 4076.3.1 |
| 46 | B | e8xgcB02 | B:91-221 | Sld5 | 4163 → 4163.1 → 4163.1.1 |
| 47 | C | e8xgcC1 | C:3-73 | GINS_N | 4076 → 4076.3 → 4076.3.1 |
| 48 | C | e8xgcC2 | C:74-141,C:162-193 | Sld5 | 4163 → 4163.1 → 4163.1.2 |
| 49 | D | e8xgcD1 | D:54-222 | Sld5 | 4163 → 4163.1 → 4163.1.1 |
| 50 | D | e8xgcD2 | D:223-293 | SLD5_C | 4076 → 4076.3 → 4076.3.1 |
| 51 | E | e8xgcE1 | E:5-165,E:218-314,E:421-436,E:462-504 | CDC45 | 2006 → 2006.1 → 2006.1.2 |
| 52 | E | e8xgcE2 | E:505-650 | CDC45 | 5104 → 5104.1 → 5104.1.1 |
| 53 | E | e8xgcE3 | E:315-420 | CDC45 | 102 → 102.9 → 102.9.1 |
| 54 | F | e8xgcF1 | F:781-790,F:814-927 | Ctf4_C | 109 → 109.40 → 109.40.1 |
| 55 | F | e8xgcF2 | F:474-780 | Mcl1_mid | 5 → 5.1 → 5.1.3 |
| 56 | G | e8xgcG1 | G:781-790,G:814-927 | Ctf4_C | 109 → 109.40 → 109.40.1 |
| 57 | G | e8xgcG2 | G:474-780 | Mcl1_mid | 5 → 5.1 → 5.1.3 |
| 58 | H | e8xgcH1 | H:781-790,H:814-927 | Ctf4_C | 109 → 109.40 → 109.40.1 |
| 59 | H | e8xgcH2 | H:474-780 | Mcl1_mid | 5 → 5.1 → 5.1.3 |
| 60 | L | e8xgcL1 | L:653-828 | PH_SPT16 | 220 → 220.1 → 220.1.1 |
| 61 | L | e8xgcL2 | L:829-968 | Rttp106-like_middle | 220 → 220.1 → 220.1.1 |
| 62 | L | e8xgcL3 | L:536-652 | SPT16 | 220 → 220.1 → 220.1.1 |
| 63 | M | e8xgcM1 | M:226-372 | PH1_SSRP1-like | 220 → 220.1 → 220.1.1 |
| 64 | M | e8xgcM2 | M:2-111 | POB3_N | 220 → 220.1 → 220.1.1 |
| 65 | M | e8xgcM3 | M:373-474 | Rttp106-like_middle | 220 → 220.1 → 220.1.1 |
| 66 | M | e8xgcM4 | M:106-179 | SSrecog | 220 → 220.1 → 220.1.1 |
| 67 | N | e8xgcN1 | N:39-134 | Histone | 148 → 148.1 → 148.1.1 |
| 68 | O | e8xgcO1 | O:16-103 | CENP-T_C | 148 → 148.1 → 148.1.1 |
| 69 | P | e8xgcP1 | P:17-102 | Histone | 148 → 148.1 → 148.1.1 |
| 70 | Q | e8xgcQ1 | Q:36-128 | Histone | 148 → 148.1 → 148.1.1 |
| 71 | R | e8xgcR1 | R:39-134 | Histone | 148 → 148.1 → 148.1.1 |
| 72 | S | e8xgcS1 | S:16-103 | CENP-T_C | 148 → 148.1 → 148.1.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors