PDB 8XMC
0 chains30 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
Chain Aview chain
9 domainse8xmcA1(A:1-314,A:384-390,A:533-537,A:659-672,A:715-722,A:762-770,A:776-778,A:790-792,A:932-934,A:942-942,A:1008-1015,A:1030-1045,A:1065-1068,A:1210-1214)e8xmcA2(A:315-352,A:406-429,A:431-490)e8xmcA3(A:353-383,A:391-405,A:430-430)e8xmcA4(A:491-532,A:538-625,A:629-630)e8xmcA5(A:626-628,A:631-658,A:673-714,A:723-761,A:771-775,A:779-789,A:793-875)e8xmcA6(A:876-928,A:1156-1209,A:1215-1268)e8xmcA7(A:929-931,A:935-941,A:943-962,A:973-974,A:1088-1110,A:1136-1155)e8xmcA8(A:963-972,A:975-1007,A:1016-1029,A:1046-1064,A:1069-1087)e8xmcA9(A:1346-1420)
Chain Bview chain
7 domainsChain Cview chain
2 domainsChain Dview chain
1 domainChain Eview chain
2 domainsChain Fview chain
1 domainChain Gview chain
2 domainsChain Hview chain
1 domainChain Iview chain
2 domainsChain Jview chain
1 domainChain Kview chain
1 domainChain Lview chain
1 domainAll Domains (30)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | A | e8xmcA1 | A:1-314,A:384-390,A:533-537,A:659-672,A:715-722,A:762-770,A:776-778,A:790-792,A:932-934,A:942-942,A:1008-1015,A:1030-1045,A:1065-1068,A:1210-1214 | 4246.1.1.0 | 4246 → 4246.1 → 4246.1.1 |
| 2 | A | e8xmcA2 | A:315-352,A:406-429,A:431-490 | RNA_pol_Rpb1_2 | 1 → 1.1 → 1.1.2 |
| 3 | A | e8xmcA3 | A:353-383,A:391-405,A:430-430 | 275.1.1.0 | 275 → 275.1 → 275.1.1 |
| 4 | A | e8xmcA4 | A:491-532,A:538-625,A:629-630 | RNA_pol_Rpb1_3 | 4959 → 4959.1 → 4959.1.1 |
| 5 | A | e8xmcA5 | A:626-628,A:631-658,A:673-714,A:723-761,A:771-775,A:779-789,A:793-875 | RNA_pol_Rpb1_4 | 4958 → 4958.1 → 4958.1.1 |
| 6 | A | e8xmcA6 | A:876-928,A:1156-1209,A:1215-1268 | 4954.1.1.0 | 4954 → 4954.1 → 4954.1.1 |
| 7 | A | e8xmcA7 | A:929-931,A:935-941,A:943-962,A:973-974,A:1088-1110,A:1136-1155 | 4956.1.1.0 | 4956 → 4956.1 → 4956.1.1 |
| 8 | A | e8xmcA8 | A:963-972,A:975-1007,A:1016-1029,A:1046-1064,A:1069-1087 | 4955.1.1.0 | 4955 → 4955.1 → 4955.1.1 |
| 9 | A | e8xmcA9 | A:1346-1420 | DUF3223 | 3556 → 3556.1 → 3556.1.1 |
| 10 | B | e8xmcB1 | B:22-138,B:170-221,B:398-536 | RNA_pol_Rpb2_1,RNA_pol_Rpb2_3 | 4010 → 4010.1 → 4010.1.1 |
| 11 | B | e8xmcB2 | B:762-799,B:909-1044 | RNA_pol_Rpb2_6 | 1 → 1.1 → 1.1.2 |
| 12 | B | e8xmcB3 | B:1043-1171 | RNA_pol_Rpb2_7 | 4043 → 4043.1 → 4043.1.1 |
| 13 | B | e8xmcB4 | B:625-761 | RNA_pol_Rpb2_6,RNA_pol_Rpb2_5 | 4042 → 4042.1 → 4042.1.1 |
| 14 | B | e8xmcB5 | B:222-398 | RNA_pol_Rpb2_2 | 4041 → 4041.1 → 4041.1.1 |
| 15 | B | e8xmcB6 | B:537-624 | RNA_pol_Rpb2_4 | 4961 → 4961.1 → 4961.1.1 |
| 16 | B | e8xmcB7 | B:800-910 | RNA_pol_Rpb2_6 | 325 → 325.1 → 325.1.7 |
| 17 | C | e8xmcC1 | C:46-182 | RNA_pol_A_bac | 240 → 240.2 → 240.2.1 |
| 18 | C | e8xmcC2 | C:5-45,C:183-306 | RNA_pol_L | 305 → 305.1 → 305.1.1 |
| 19 | D | e8xmcD1 | D:85-201 | RNA_pol_Rpb4 | 102 → 102.1 → 102.1.1 |
| 20 | E | e8xmcE1 | E:3-133 | RNA_pol_Rpb5_N | 2008 → 2008.3 → 2008.3.1 |
| 21 | E | e8xmcE2 | E:134-205 | RNA_pol_Rpb5_C | 840 → 840.1 → 840.1.1 |
| 22 | F | e8xmcF1 | F:59-134 | RNA_pol_Rpb6 | 152 → 152.1 → 152.1.1 |
| 23 | G | e8xmcG1 | G:41-81 | 872.1.1.0 | 872 → 872.1 → 872.1.1 |
| 24 | G | e8xmcG2 | G:82-174 | 2.1.1.0 | 2 → 2.1 → 2.1.1 |
| 25 | H | e8xmcH1 | H:5-146 | RNA_pol_Rpb8 | 2 → 2.1 → 2.1.1 |
| 26 | I | e8xmcI1 | I:51-114 | TFIIS_C | 375 → 375.1 → 375.1.1 |
| 27 | I | e8xmcI2 | I:2-50 | RNA_POL_M_15KD | 375 → 375.1 → 375.1.1 |
| 28 | J | e8xmcJ1 | J:1-62 | RNA_pol_N | 101 → 101.4 → 101.4.1 |
| 29 | K | e8xmcK1 | K:17-110 | RNA_pol_L_2 | 305 → 305.1 → 305.1.1 |
| 30 | L | e8xmcL1 | L:9-50 | DNA_RNApol_7kD | 375 → 375.1 → 375.1.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors