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PDB 8Y5P

0 chains89 ECOD domains
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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

All Domains (89)

#ChainDomain IDRangeFamilyClassification
1ae8y5pa1a:69-159Ribosomal_L12007 → 2007.25 → 2007.25.1
2ae8y5pa2a:1-68,a:160-234Ribosomal_L1898 → 898.1 → 898.1.1
3Ae8y5pA1A:1-70Ribosomal_L314987 → 4987.1 → 4987.1.1
4A1e8y5pA11A1:53-178RNA_pol_A_bac240 → 240.2 → 240.2.1
5A1e8y5pA12A1:237-328RNA_pol_A_CTD102 → 102.1 → 102.1.1
6A1e8y5pA13A1:2-52,A1:179-236RNA_pol_L305 → 305.1 → 305.1.1
7A2e8y5pA21A2:53-178RNA_pol_A_bac240 → 240.2 → 240.2.1
8A2e8y5pA22A2:237-328RNA_pol_A_CTD102 → 102.1 → 102.1.1
9A2e8y5pA23A2:2-52,A2:179-236RNA_pol_L305 → 305.1 → 305.1.1
10be8y5pb1b:4-125Ribosomal_L22 → 2.1 → 2.1.1
11be8y5pb2b:126-270Ribosomal_L2_C4 → 4.1 → 4.1.1
12Be8y5pB1B:2-57Ribosomal_L32p375 → 375.1 → 375.1.1
13B1e8y5pB11B1:14-341RNA_pol_Rpb1_14246 → 4246.1 → 4246.1.1
14B1e8y5pB12B1:639-810RNA_pol_Rpb1_5,RNA_pol_Rpb1_44958 → 4958.1 → 4958.1.1
15B1e8y5pB13B1:895-931,B1:1214-1389RNA_pol_Rpb1_54954 → 4954.1 → 4954.1.1
16B1e8y5pB14B1:499-638RNA_pol_Rpb1_34959 → 4959.1 → 4959.1.1
17B1e8y5pB15B1:334-498RNA_pol_Rpb1_21 → 1.1 → 1.1.2
18B1e8y5pB16B1:1023-1151325.1.7.0325 → 325.1 → 325.1.7
19B1e8y5pB17B1:811-894275.1.1.0275 → 275.1 → 275.1.1
20B1e8y5pB18B1:932-1022325.1.7.0325 → 325.1 → 325.1.7
21B1e8y5pB19B1:1152-1215325.1.7.0325 → 325.1 → 325.1.7
22B2e8y5pB21B2:1238-1342RNA_pol_Rpb2_6,RNA_pol_Rpb2_74043 → 4043.1 → 4043.1.1
23B2e8y5pB22B2:153-226,B2:343-451RNA_pol_Rpb2_24041 → 4041.1 → 4041.1.1
24B2e8y5pB23B2:828-942,B2:1042-1062RNA_pol_Rpb2_6325 → 325.1 → 325.1.7
25B2e8y5pB24B2:791-828,B2:1060-1125,B2:1180-1237RNA_pol_Rpb2_61 → 1.1 → 1.1.2
26B2e8y5pB25B2:713-790RNA_pol_Rpb2_6325 → 325.1 → 325.1.7
27B2e8y5pB26B2:10-152,B2:450-577RNA_pol_Rpb2_1,RNA_pol_Rpb2_34010 → 4010.1 → 4010.1.1
28B2e8y5pB27B2:578-714RNA_pol_Rpb2_454042 → 4042.1 → 4042.1.1
29ce8y5pc1c:1-209Ribosomal_L31 → 1.1 → 1.1.7
30Ce8y5pC1C:4-53Ribosomal_L33375 → 375.1 → 375.1.1
31de8y5pd1d:1-198Ribosomal_L47559 → 7559.1 → 7559.1.1
32De8y5pD1D:1-46Ribosomal_L343074 → 3074.1 → 3074.1.1
33ee8y5pe1e:2-179Ribosomal_L5,Ribosomal_L5_C882 → 882.1 → 882.1.1
34Ee8y5pE1E:2-65Ribosomal_L35p4281 → 4281.1 → 4281.1.1
35fe8y5pf1f:2-82Ribosomal_L6318 → 318.1 → 318.1.1
36fe8y5pf2f:83-177Ribosomal_L6318 → 318.1 → 318.1.1
37Fe8y5pF1F:1-38Ribosomal_L36919 → 919.1 → 919.1.1
38ge8y5pg1g:1-52Ribosomal_L9_N4076 → 4076.1 → 4076.1.1
39ge8y5pg2g:56-149Ribosomal_L9_C523 → 523.1 → 523.1.1
40Ge8y5pG1G:9-226Ribosomal_S22007 → 2007.6 → 2007.6.1
41He8y5pH1H:107-207Ribosomal_S3_C230 → 230.2 → 230.2.1
42He8y5pH2H:2-106KH_2327 → 327.11 → 327.11.1
43ie8y5pi1i:2-72Ribosomal_L11_N3781 → 3781.1 → 3781.1.1
44ie8y5pi2i:73-142Ribosomal_L11101 → 101.1 → 101.1.16
45Ie8y5pI1I:2-206Ribosomal_S4,S4221 → 221.1 → 221.1.2
46je8y5pj1j:1-140Ribosomal_L132490 → 2490.2 → 2490.2.1
47Je8y5pJ1J:79-166Ribosomal_S5_C212 → 212.1 → 212.1.1
48Je8y5pJ2J:10-78Ribosomal_S5330 → 330.1 → 330.1.1
49ke8y5pk1k:2-122Ribosomal_L143174 → 3174.1 → 3174.1.1
50Ke8y5pK1K:1-100Ribosomal_S6304 → 304.12 → 304.12.1
51le8y5pl1l:1-144Ribosomal_L27A, PF294712490 → 2490.3 → 2490.3.1
52Le8y5pL1L:2-152Ribosomal_S7167 → 167.1 → 167.1.1
53me8y5pm1m:1-136Ribosomal_L16325 → 325.1 → 325.1.5
54Me8y5pM1M:2-66Ribosomal_S8320 → 320.2 → 320.2.1
55Me8y5pM2M:67-130Ribosomal_S84988 → 4988.1 → 4988.1.1
56ne8y5pn1n:14-117Ribosomal_L17218 → 218.3 → 218.3.1
57Ne8y5pN1N:4-130Ribosomal_S9212 → 212.1 → 212.1.1
58NAe8y5pNA1NA:1-127NusA_N885 → 885.1 → 885.1.1
59NAe8y5pNA2NA:199-278KH_5327 → 327.11 → 327.11.1
60NAe8y5pNA3NA:126-199S12 → 2.1 → 2.1.1
61NAe8y5pNA4NA:345-422102.1.1.0102 → 102.1 → 102.1.1
62NAe8y5pNA5NA:423-495HHH_5102 → 102.1 → 102.1.1
63NAe8y5pNA6NA:279-346KH_NusA_2nd327 → 327.11 → 327.11.1
64NGe8y5pNG1NG:123-181KOW4 → 4.1 → 4.1.1
65oe8y5po1o:1-117Ribosomal_L18p2484 → 2484.1 → 2484.1.1
66Oe8y5pO1O:5-102Ribosomal_S10304 → 304.44 → 304.44.1
67pe8y5pp1p:2-115Ribosomal_L194 → 4.1 → 4.1.1
68Pe8y5pP1P:13-128Ribosomal_S112484 → 2484.1 → 2484.1.1
69qe8y5pq1q:2-118Ribosomal_L20143 → 143.2 → 143.2.1
70Qe8y5pQ1Q:2-124Ribosom_S12_S232 → 2.1 → 2.1.1
71re8y5pr1r:1-103Ribosomal_L21p4186 → 4186.1 → 4186.1.1
72Re8y5pR1R:2-115Ribosomal_S13102 → 102.2 → 102.2.1
73se8y5ps1s:1-110Ribosomal_L22218 → 218.2 → 218.2.1
74Se8y5pS1S:2-101Ribosomal_S14377 → 377.1 → 377.1.1
75te8y5pt1t:6-99Ribosomal_L23304 → 304.109 → 304.109.1
76Te8y5pT1T:2-87Ribosomal_S15616 → 616.1 → 616.1.1
77ue8y5pu1u:2-103KOW,ribosomal_L244 → 4.1 → 4.1.1
78Ue8y5pU1U:1-82Ribosomal_S16837 → 837.1 → 837.1.1
79ve8y5pv1v:1-94Ribosomal_L25p239 → 239.1 → 239.1.1
80Ve8y5pV1V:4-83Ribosomal_S172 → 2.1 → 2.1.1
81we8y5pw1w:7-85Ribosomal_L27325 → 325.1 → 325.1.8
82We8y5pW1W:10-74Ribosomal_S18101 → 101.1 → 101.1.1
83W0e8y5pW01W0:2-90RNA_pol_Rpb6152 → 152.1 → 152.1.2
84xe8y5px1x:2-78Ribosomal_L284232 → 4232.1 → 4232.1.1
85Xe8y5pX1X:3-81Ribosomal_S19838 → 838.1 → 838.1.1
86ye8y5py1y:1-60Ribosomal_L29192 → 192.4 → 192.4.1
87Ye8y5pY1Y:3-87Ribosomal_S20p604 → 604.9 → 604.9.1
88ze8y5pz1z:2-59Ribosomal_L30887 → 887.1 → 887.1.1
89Ze8y5pZ1Z:4-68Ribosomal_S213666 → 3666.1 → 3666.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors