PDB 8Y6O
ELECTRON MICROSCOPY0 chains58 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
Chain aview chain
1 domainChain bview chain
1 domainChain cview chain
1 domainChain Cview chain
6 domainsChain dview chain
1 domainChain Dview chain
5 domainsChain eview chain
1 domainChain Eview chain
12 domainsChain fview chain
1 domainChain Fview chain
1 domainChain gview chain
1 domainChain Gview chain
1 domainChain hview chain
1 domainChain Hview chain
1 domainChain iview chain
1 domainChain Iview chain
2 domainsChain jview chain
1 domainChain kview chain
1 domainChain lview chain
1 domainChain Lview chain
2 domainsChain mview chain
1 domainChain Mview chain
1 domainChain nview chain
1 domainChain Nview chain
1 domainChain oview chain
1 domainChain Oview chain
1 domainChain pview chain
1 domainChain qview chain
1 domainChain Qview chain
1 domainChain rview chain
1 domainChain sview chain
1 domainChain tview chain
1 domainChain uview chain
1 domainChain Uview chain
2 domainsChain Xview chain
1 domainAll Domains (58)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | a | e8y6oa1 | a:7-95 | LSM | 4 → 4.1 → 4.1.1 |
| 2 | b | e8y6ob1 | b:2-81 | LSM | 4 → 4.1 → 4.1.1 |
| 3 | c | e8y6oc1 | c:26-73,c:93-118 | LSM | 4 → 4.1 → 4.1.1 |
| 4 | C | e8y6oC1 | C:26-810 | PRO8NT,PROCN | 1038 → 1038.1 → 1038.1.1 |
| 5 | C | e8y6oC2 | C:811-1182 | RRM_4 | 304 → 304.48 → 304.48.1 |
| 6 | C | e8y6oC3 | C:1183-1502 | U6-snRNA_bdg,U5_2-snRNA_bdg | 4967 → 4967.1 → 4967.1.1 |
| 7 | C | e8y6oC4 | C:1755-2006 | PRP8_domainIV | 2484 → 2484.1 → 2484.1.1 |
| 8 | C | e8y6oC5 | C:1503-1754 | U6-snRNA_bdg | 2008 → 2008.1 → 2008.1.1 |
| 9 | C | e8y6oC6 | C:2067-2314 | JAB,PROCT | 2492 → 2492.1 → 2492.1.1 |
| 10 | d | e8y6od1 | d:4-75 | LSM | 4 → 4.1 → 4.1.1 |
| 11 | D | e8y6oD1 | D:829-957 | EFG_C | 304 → 304.24 → 304.24.1 |
| 12 | D | e8y6oD2 | D:581-659 | EFG_III | 304 → 304.24 → 304.24.1 |
| 13 | D | e8y6oD3 | D:660-828 | EFG_IV | 212 → 212.1 → 212.1.1 |
| 14 | D | e8y6oD4 | D:114-439 | GTP_EFTU | 2004 → 2004.1 → 2004.1.1 |
| 15 | D | e8y6oD5 | D:440-580 | GTP_EFTU_D2 | 1 → 1.1 → 1.1.7 |
| 16 | e | e8y6oe1 | e:18-92 | LSM | 4 → 4.1 → 4.1.1 |
| 17 | E | e8y6oE1 | E:1312-1520 | DEAD | 2004 → 2004.1 → 2004.1.1 |
| 18 | E | e8y6oE2 | E:683-886 | Helicase_C | 2004 → 2004.1 → 2004.1.1 |
| 19 | E | e8y6oE3 | E:1825-1957 | Sec63 | 4156 → 4156.1 → 4156.1.1 |
| 20 | E | e8y6oE4 | E:433-682 | DEAD | 2004 → 2004.1 → 2004.1.1 |
| 21 | E | e8y6oE5 | E:2016-2125 | Sec63 | 11 → 11.1 → 11.1.1 |
| 22 | E | e8y6oE6 | E:1723-1824 | SNRNP200_wHTH | 101 → 101.1 → 101.1.2 |
| 23 | E | e8y6oE7 | E:887-993 | SNRNP200_wHTH | 101 → 101.1 → 101.1.2 |
| 24 | E | e8y6oE8 | E:994-1125 | Sec63 | 4156 → 4156.1 → 4156.1.1 |
| 25 | E | e8y6oE9 | E:1958-2015 | 102.5.1.0 | 102 → 102.5 → 102.5.1 |
| 26 | E | e8y6oE10 | E:1521-1722 | Helicase_C | 2004 → 2004.1 → 2004.1.1 |
| 27 | E | e8y6oE11 | E:1181-1311 | Sec63 | 11 → 11.1 → 11.1.1 |
| 28 | E | e8y6oE12 | E:1126-1180 | 102.5.1.0 | 102 → 102.5 → 102.5.1 |
| 29 | f | e8y6of1 | f:7-81 | LSM | 4 → 4.1 → 4.1.1 |
| 30 | F | e8y6oF1 | F:62-355 | WD40, Beta-prop_NOL10_N | 5 → 5.1 → 5.1.4 |
| 31 | g | e8y6og1 | g:4-76 | LSM | 4 → 4.1 → 4.1.1 |
| 32 | G | e8y6oG1 | G:292-937 | TPR_14, TPR_16, TPR_19, PF29376 | 109 → 109.4 → 109.4.1 |
| 33 | h | e8y6oh1 | h:7-95 | LSM | 4 → 4.1 → 4.1.1 |
| 34 | H | e8y6oH1 | H:1-137 | DIM1 | 2485 → 2485.1 → 2485.1.1 |
| 35 | i | e8y6oi1 | i:2-81 | LSM | 4 → 4.1 → 4.1.1 |
| 36 | I | e8y6oI1 | I:352-630 | DEAD | 2004 → 2004.1 → 2004.1.1 |
| 37 | I | e8y6oI2 | I:639-806 | Helicase_C | 2004 → 2004.1 → 2004.1.1 |
| 38 | j | e8y6oj1 | j:26-73,j:93-118 | LSM | 4 → 4.1 → 4.1.1 |
| 39 | k | e8y6ok1 | k:4-75 | LSM | 4 → 4.1 → 4.1.1 |
| 40 | l | e8y6ol1 | l:18-92 | LSM | 4 → 4.1 → 4.1.1 |
| 41 | L | e8y6oL1 | L:85-216 | Nop | 606 → 606.1 → 606.1.1 |
| 42 | L | e8y6oL2 | L:217-333 | Nop | 102 → 102.1 → 102.1.4 |
| 43 | m | e8y6om1 | m:7-81 | LSM | 4 → 4.1 → 4.1.1 |
| 44 | M | e8y6oM1 | M:164-522 | WD40 | 5 → 5.1 → 5.1.4 |
| 45 | n | e8y6on1 | n:4-76 | LSM | 4 → 4.1 → 4.1.1 |
| 46 | N | e8y6oN1 | N:539-673 | Prp3_C | 304 → 304.110 → 304.110.1 |
| 47 | o | e8y6oo1 | o:7-95 | LSM | 4 → 4.1 → 4.1.1 |
| 48 | O | e8y6oO1 | O:4-128 | Ribosomal_L7Ae | 301 → 301.1 → 301.1.1 |
| 49 | p | e8y6op1 | p:2-81 | LSM | 4 → 4.1 → 4.1.1 |
| 50 | q | e8y6oq1 | q:26-73,q:93-118 | LSM | 4 → 4.1 → 4.1.1 |
| 51 | Q | e8y6oQ1 | Q:676-1005 | Pkinase | 206 → 206.1 → 206.1.1 |
| 52 | r | e8y6or1 | r:4-75 | LSM | 4 → 4.1 → 4.1.1 |
| 53 | s | e8y6os1 | s:18-92 | LSM | 4 → 4.1 → 4.1.1 |
| 54 | t | e8y6ot1 | t:7-81 | LSM | 4 → 4.1 → 4.1.1 |
| 55 | u | e8y6ou1 | u:4-76 | LSM | 4 → 4.1 → 4.1.1 |
| 56 | U | e8y6oU1 | U:223-556 | UCH | 219 → 219.1 → 219.1.1 |
| 57 | U | e8y6oU2 | U:105-190 | zf-UBP | 376 → 376.1 → 376.1.1 |
| 58 | X | e8y6oX1 | X:40-132 | 221.1.1.0 | 221 → 221.1 → 221.1.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors