PDB 8YGD
0 chains35 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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1 domainAll Domains (35)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | 0 | e8ygd001 | 0:1-49 | LHC | 5074 → 5074.1 → 5074.1.1 |
| 2 | 1 | e8ygd101 | 1:1-62 | LHC | 5074 → 5074.1 → 5074.1.1 |
| 3 | 2 | e8ygd21 | 2:1-49 | LHC | 5074 → 5074.1 → 5074.1.1 |
| 4 | 3 | e8ygd31 | 3:1-62 | LHC | 5074 → 5074.1 → 5074.1.1 |
| 5 | 7 | e8ygd71 | 7:1-62 | LHC | 5074 → 5074.1 → 5074.1.1 |
| 6 | 8 | e8ygd81 | 8:1-49 | LHC | 5074 → 5074.1 → 5074.1.1 |
| 7 | 9 | e8ygd91 | 9:1-62 | LHC | 5074 → 5074.1 → 5074.1.1 |
| 8 | a | e8ygda1 | a:1-62 | LHC | 5074 → 5074.1 → 5074.1.1 |
| 9 | A | e8ygdA1 | A:1-62 | LHC | 5074 → 5074.1 → 5074.1.1 |
| 10 | b | e8ygdb1 | b:1-49 | LHC | 5074 → 5074.1 → 5074.1.1 |
| 11 | B | e8ygdB1 | B:1-49 | LHC | 5074 → 5074.1 → 5074.1.1 |
| 12 | C | e8ygdC1 | C:1-49 | LHC | 5074 → 5074.1 → 5074.1.1 |
| 13 | D | e8ygdD1 | D:1-62 | LHC | 5074 → 5074.1 → 5074.1.1 |
| 14 | E | e8ygdE1 | E:1-49 | LHC | 5074 → 5074.1 → 5074.1.1 |
| 15 | F | e8ygdF1 | F:1-62 | LHC | 5074 → 5074.1 → 5074.1.1 |
| 16 | G | e8ygdG1 | G:1-49 | LHC | 5074 → 5074.1 → 5074.1.1 |
| 17 | H | e8ygdH01 | H:1-35 | PRCH | 5002 → 5002.1 → 5002.1.1 |
| 18 | H | e8ygdH02 | H:36-253 | Photosynthetic reaction centre, H-chain N-terminal region / PRC-barrel domain | 4 → 4.6 → 4.6.1 |
| 19 | I | e8ygdI1 | I:1-62 | LHC | 5074 → 5074.1 → 5074.1.1 |
| 20 | J | e8ygdJ1 | J:1-49 | LHC | 5074 → 5074.1 → 5074.1.1 |
| 21 | K | e8ygdK1 | K:1-62 | LHC | 5074 → 5074.1 → 5074.1.1 |
| 22 | L | e8ygdL01 | L:1-282 | Photo_RC | 5037 → 5037.1 → 5037.1.1 |
| 23 | M | e8ygdM01 | M:1-303 | Photo_RC | 5037 → 5037.1 → 5037.1.1 |
| 24 | N | e8ygdN1 | N:1-49 | LHC | 5074 → 5074.1 → 5074.1.1 |
| 25 | O | e8ygdO1 | O:1-62 | LHC | 5074 → 5074.1 → 5074.1.1 |
| 26 | P | e8ygdP1 | P:1-49 | LHC | 5074 → 5074.1 → 5074.1.1 |
| 27 | Q | e8ygdQ1 | Q:1-62 | LHC | 5074 → 5074.1 → 5074.1.1 |
| 28 | R | e8ygdR1 | R:1-49 | LHC | 5074 → 5074.1 → 5074.1.1 |
| 29 | S | e8ygdS1 | S:1-62 | LHC | 5074 → 5074.1 → 5074.1.1 |
| 30 | T | e8ygdT1 | T:1-49 | LHC | 5074 → 5074.1 → 5074.1.1 |
| 31 | U | e8ygdU1 | U:1-62 | LHC | 5074 → 5074.1 → 5074.1.1 |
| 32 | V | e8ygdV1 | V:1-49 | LHC | 5074 → 5074.1 → 5074.1.1 |
| 33 | W | e8ygdW1 | W:1-62 | LHC | 5074 → 5074.1 → 5074.1.1 |
| 34 | X | e8ygdX01 | X:1-73 | RhodobacterPufX | 6014 → 6014.1 → 6014.1.1 |
| 35 | Z | e8ygdZ1 | Z:1-49 | LHC | 5074 → 5074.1 → 5074.1.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors