PDB 8YKA
0 chains36 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
Loading viewer...
Domains by Chain
Chain Aview chain
6 domainsChain Bview chain
6 domainsChain Cview chain
6 domainsChain Dview chain
6 domainsChain Eview chain
6 domainsAll Domains (36)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | A | e8ykaA01 | A:12-106,A:593-595,A:600-623 | CDC48_N | 1 → 1.1 → 1.1.2 |
| 2 | A | e8ykaA02 | A:107-212 | CDC48_2 | 229 → 229.1 → 229.1.1 |
| 3 | A | e8ykaA03 | A:213-377 | AAA | 2004 → 2004.1 → 2004.1.1 |
| 4 | A | e8ykaA04 | A:378-539 | AAA, AAA_lid_3 | 2004 → 2004.1 → 2004.1.1 |
| 5 | A | e8ykaA05 | A:540-592,A:596-599,A:624-661 | AAA | 2004 → 2004.1 → 2004.1.1 |
| 6 | A | e8ykaA06 | A:662-749 | AAA_lid_3 | 2004 → 2004.1 → 2004.1.1 |
| 7 | B | e8ykaB1 | B:1-95,B:582-584,B:589-612 | CDC48_N | 1 → 1.1 → 1.1.2 |
| 8 | B | e8ykaB2 | B:96-201 | CDC48_2 | 229 → 229.1 → 229.1.1 |
| 9 | B | e8ykaB3 | B:202-366 | AAA | 2004 → 2004.1 → 2004.1.1 |
| 10 | B | e8ykaB4 | B:367-528 | AAA, AAA_lid_3 | 2004 → 2004.1 → 2004.1.1 |
| 11 | B | e8ykaB5 | B:529-581,B:585-588,B:613-650 | AAA | 2004 → 2004.1 → 2004.1.1 |
| 12 | B | e8ykaB6 | B:651-738 | AAA_lid_3 | 2004 → 2004.1 → 2004.1.1 |
| 13 | C | e8ykaC1 | C:1-95,C:582-584,C:589-612 | CDC48_N | 1 → 1.1 → 1.1.2 |
| 14 | C | e8ykaC2 | C:96-201 | CDC48_2 | 229 → 229.1 → 229.1.1 |
| 15 | C | e8ykaC3 | C:202-366 | AAA | 2004 → 2004.1 → 2004.1.1 |
| 16 | C | e8ykaC4 | C:367-528 | AAA, AAA_lid_3 | 2004 → 2004.1 → 2004.1.1 |
| 17 | C | e8ykaC5 | C:529-581,C:585-588,C:613-650 | AAA | 2004 → 2004.1 → 2004.1.1 |
| 18 | C | e8ykaC6 | C:651-738 | AAA_lid_3 | 2004 → 2004.1 → 2004.1.1 |
| 19 | D | e8ykaD1 | D:1-95,D:582-584,D:589-612 | CDC48_N | 1 → 1.1 → 1.1.2 |
| 20 | D | e8ykaD2 | D:96-201 | CDC48_2 | 229 → 229.1 → 229.1.1 |
| 21 | D | e8ykaD3 | D:202-366 | AAA | 2004 → 2004.1 → 2004.1.1 |
| 22 | D | e8ykaD4 | D:367-528 | AAA, AAA_lid_3 | 2004 → 2004.1 → 2004.1.1 |
| 23 | D | e8ykaD5 | D:529-581,D:585-588,D:613-650 | AAA | 2004 → 2004.1 → 2004.1.1 |
| 24 | D | e8ykaD6 | D:651-738 | AAA_lid_3 | 2004 → 2004.1 → 2004.1.1 |
| 25 | E | e8ykaE1 | E:1-95,E:582-584,E:589-612 | CDC48_N | 1 → 1.1 → 1.1.2 |
| 26 | E | e8ykaE2 | E:96-201 | CDC48_2 | 229 → 229.1 → 229.1.1 |
| 27 | E | e8ykaE3 | E:202-366 | AAA | 2004 → 2004.1 → 2004.1.1 |
| 28 | E | e8ykaE4 | E:367-528 | AAA, AAA_lid_3 | 2004 → 2004.1 → 2004.1.1 |
| 29 | E | e8ykaE5 | E:529-581,E:585-588,E:613-650 | AAA | 2004 → 2004.1 → 2004.1.1 |
| 30 | E | e8ykaE6 | E:651-738 | AAA_lid_3 | 2004 → 2004.1 → 2004.1.1 |
| 31 | F | e8ykaF1 | F:1-95,F:582-584,F:589-612 | CDC48_N | 1 → 1.1 → 1.1.2 |
| 32 | F | e8ykaF2 | F:96-201 | CDC48_2 | 229 → 229.1 → 229.1.1 |
| 33 | F | e8ykaF3 | F:202-366 | AAA | 2004 → 2004.1 → 2004.1.1 |
| 34 | F | e8ykaF4 | F:367-528 | AAA, AAA_lid_3 | 2004 → 2004.1 → 2004.1.1 |
| 35 | F | e8ykaF5 | F:529-581,F:585-588,F:613-650 | AAA | 2004 → 2004.1 → 2004.1.1 |
| 36 | F | e8ykaF6 | F:651-738 | AAA_lid_3 | 2004 → 2004.1 → 2004.1.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors