PDB 8YLR
0 chains97 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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1 domainAll Domains (97)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | a | e8ylra1 | a:1-123 | KOW, Ribosomal_L26 | 4 → 4.1 → 4.1.1 |
| 2 | b | e8ylrb1 | b:1-135 | Ribosomal_L27e | 4 → 4.1 → 4.1.1 |
| 3 | c | e8ylrc1 | c:1-148 | Ribosomal_L27A | 2490 → 2490.3 → 2490.3.1 |
| 4 | d | e8ylrd1 | d:1-46 | Ribosomal_L29e | 3212 → 3212.1 → 3212.1.1 |
| 5 | D | e8ylrD1 | D:98-251 | Ribosomal_L2_C | 4 → 4.1 → 4.1.1 |
| 6 | D | e8ylrD2 | D:1-97 | Ribosomal_L2 | 2 → 2.1 → 2.1.1 |
| 7 | e | e8ylre1 | e:1-96 | Ribosomal_L7Ae | 301 → 301.1 → 301.1.1 |
| 8 | E | e8ylrE1 | E:1-386 | Ribosomal_L3 | 1 → 1.1 → 1.1.7 |
| 9 | f | e8ylrf1 | f:1-109 | Ribosomal_L31e | 259 → 259.1 → 259.1.1 |
| 10 | F | e8ylrF1 | F:1-268 | Ribosomal_L4 | 7559 → 7559.1 → 7559.1.1 |
| 11 | F | e8ylrF2 | F:269-361 | Ribos_L4_asso_C | 3319 → 3319.1 → 3319.1.1 |
| 12 | g | e8ylrg1 | g:1-127 | Ribosomal_L32e | 2490 → 2490.1 → 2490.1.1 |
| 13 | G | e8ylrG1 | G:1-294 | Ribosomal_L18_c,Ribosomal_L5e | 2484 → 2484.1 → 2484.1.1 |
| 14 | h | e8ylrh1 | h:1-106 | Ribosomal_L35Ae | 1 → 1.1 → 1.1.7 |
| 15 | H | e8ylrH1 | H:1-175 | Ribosomal_L6e | 4 → 4.1 → 4.1.1 |
| 16 | i | e8ylri1 | i:1-112 | Ribosomal_L34e | 377 → 377.12 → 377.12.1 |
| 17 | I | e8ylrI1 | I:1-223 | Ribosomal_L30,Ribosomal_L30_N | 887 → 887.1 → 887.1.1 |
| 18 | j | e8ylrj1 | j:1-119 | Ribosomal_L29 | 192 → 192.4 → 192.4.1 |
| 19 | J | e8ylrJ1 | J:1-233 | Ribosomal_L7Ae | 301 → 301.1 → 301.1.1 |
| 20 | k | e8ylrk1 | k:1-99 | Ribosomal_L36e | 3166 → 3166.1 → 3166.1.1 |
| 21 | K | e8ylrK1 | K:86-191 | Ribosomal_L6 | 318 → 318.1 → 318.1.1 |
| 22 | K | e8ylrK2 | K:1-85 | Ribosomal_L6 | 318 → 318.1 → 318.1.1 |
| 23 | l | e8ylrl1 | l:1-81 | Ribosomal_L37e | 375 → 375.1 → 375.1.1 |
| 24 | L | e8ylrL1 | L:1-218 | Ribosomal_L16 | 325 → 325.1 → 325.1.5 |
| 25 | m | e8ylrm1 | m:2-72 | Ribosomal_L38e | 896 → 896.1 → 896.1.1 |
| 26 | M | e8ylrM1 | M:1-169 | Ribosomal_L5,Ribosomal_L5_C | 882 → 882.1 → 882.1.1 |
| 27 | n | e8ylrn1 | n:1-50 | Ribosomal_L39 | 585 → 585.1 → 585.1.1 |
| 28 | N | e8ylrN1 | N:1-193 | Ribosomal_L13e | 3210 → 3210.1 → 3210.1.1 |
| 29 | o | e8ylro1 | o:1-52 | Ribosomal_L40e | 375 → 375.1 → 375.1.1 |
| 30 | O | e8ylrO1 | O:1-136 | KOW,Ribosomal_L14e | 4 → 4.1 → 4.1.1 |
| 31 | P | e8ylrP1 | P:1-203 | Ribosomal_L15e | 304 → 304.109 → 304.109.1 |
| 32 | q | e8ylrq1 | q:1-103 | Ribosomal_L44 | 375 → 375.1 → 375.1.1 |
| 33 | Q | e8ylrQ1 | Q:1-197 | Ribosomal_L13 | 2490 → 2490.2 → 2490.2.1 |
| 34 | r | e8ylrr1 | r:1-91 | Ribosomal_L37ae | 375 → 375.1 → 375.1.1 |
| 35 | R | e8ylrR1 | R:1-155 | Ribosomal_L22 | 218 → 218.2 → 218.2.1 |
| 36 | S | e8ylrS1 | S:1-185 | Ribosomal_L18 | 2490 → 2490.3 → 2490.3.1 |
| 37 | Sa | e8ylrSa1 | Sa:1-87 | Ribosomal_S21e | 3167 → 3167.1 → 3167.1.1 |
| 38 | SA | e8ylrSA1 | SA:1-88 | KH_2 | 327 → 327.11 → 327.11.1 |
| 39 | SA | e8ylrSA2 | SA:89-222 | Ribosomal_S3_C | 230 → 230.2 → 230.2.1 |
| 40 | Sb | e8ylrSb1 | Sb:67-129 | Ribosomal_S8 | 4988 → 4988.1 → 4988.1.1 |
| 41 | Sb | e8ylrSb2 | Sb:1-66 | Ribosomal_S8 | 320 → 320.2 → 320.2.1 |
| 42 | SB | e8ylrSB1 | SB:1-206 | Ribosomal_S7 | 167 → 167.1 → 167.1.1 |
| 43 | Sc | e8ylrSc1 | Sc:1-144 | Ribosom_S12_S23 | 2 → 2.1 → 2.1.1 |
| 44 | SC | e8ylrSC1 | SC:1-92 | S10_plectin | 101 → 101.1 → 101.1.2 |
| 45 | Sd | e8ylrSd1 | Sd:1-134 | Ribosomal_S24e | 304 → 304.109 → 304.109.1 |
| 46 | SD | e8ylrSD1 | SD:1-121 | Ribosomal_L7Ae | 301 → 301.1 → 301.1.1 |
| 47 | Se | e8ylrSe1 | Se:1-94 | Ribosomal_S26e | 377 → 377.1 → 377.1.1 |
| 48 | SE | e8ylrSE1 | SE:1-117 | Ribosomal_S19 | 838 → 838.1 → 838.1.1 |
| 49 | Sf | e8ylrSf1 | Sf:1-81 | Ribosomal_S27e | 375 → 375.1 → 375.1.1 |
| 50 | SF | e8ylrSF1 | SF:1-141 | Ribosomal_S9 | 212 → 212.1 → 212.1.1 |
| 51 | Sg | e8ylrSg1 | Sg:1-60 | Ribosomal_S30 | 3168 → 3168.1 → 3168.1.1 |
| 52 | SG | e8ylrSG1 | SG:1-121 | Ribosomal_S17e | 101 → 101.1 → 101.1.17 |
| 53 | SH | e8ylrSH1 | SH:1-145 | Ribosomal_S13 | 102 → 102.2 → 102.2.1 |
| 54 | SI | e8ylrSI1 | SI:1-143 | Ribosomal_S19e | 101 → 101.1 → 101.1.2 |
| 55 | SJ | e8ylrSJ1 | SJ:1-100 | Ribosomal_S10 | 304 → 304.44 → 304.44.1 |
| 56 | SK | e8ylrSK1 | SK:36-105 | Ribosomal_S25 | 101 → 101.1 → 101.1.2 |
| 57 | SL | e8ylrSL1 | SL:1-63 | Ribosomal_S28e | 2 → 2.1 → 2.1.1 |
| 58 | SM | e8ylrSM1 | SM:1-53 | Ribosomal_S14 | 377 → 377.1 → 377.1.1 |
| 59 | SN | e8ylrSN1 | SN:1-73 | Ribosomal_S27 | 375 → 375.1 → 375.1.1 |
| 60 | SO | e8ylrSO1 | SO:1-312 | WD40 | 5 → 5.1 → 5.1.4 |
| 61 | SP | e8ylrSP1 | SP:1-206 | Ribosomal_S2 | 2007 → 2007.6 → 2007.6.1 |
| 62 | SQ | e8ylrSQ1 | SQ:113-232 | Ribosomal_S3Ae | 230 → 230.6 → 230.6.1 |
| 63 | SQ | e8ylrSQ2 | SQ:1-112 | Ribosomal_S3Ae | 239 → 239.5 → 239.5.1 |
| 64 | SR | e8ylrSR1 | SR:76-142 | Ribosomal_S5 | 330 → 330.1 → 330.1.1 |
| 65 | SR | e8ylrSR2 | SR:1-75 | Ribosomal_S5 | 3274 → 3274.1 → 3274.1.1 |
| 66 | SR | e8ylrSR3 | SR:143-216 | Ribosomal_S5_C | 212 → 212.1 → 212.1.1 |
| 67 | SS | e8ylrSS1 | SS:175-258 | KOW,40S_S4_C | 4 → 4.1 → 4.1.1 |
| 68 | SS | e8ylrSS2 | SS:116-174 | Ribosomal_S4e | 2 → 2.1 → 2.1.1 |
| 69 | SS | e8ylrSS3 | SS:1-115 | Ribosomal_S4e,S4,RS4NT | 221 → 221.1 → 221.1.2 |
| 70 | ST | e8ylrST1 | ST:1-228 | Ribosomal_S6e | 239 → 239.1 → 239.1.1 |
| 71 | SU | e8ylrSU1 | SU:1-102 | Ribosomal_S7e | 327 → 327.18 → 327.18.1 |
| 72 | SU | e8ylrSU2 | SU:103-184 | Ribosomal_S7e | 327 → 327.18 → 327.18.1 |
| 73 | SV | e8ylrSV1 | SV:2-200 | Ribosomal_S8e | 3174 → 3174.1 → 3174.1.1 |
| 74 | SW | e8ylrSW1 | SW:1-184 | Ribosomal_S4,S4 | 221 → 221.1 → 221.1.2 |
| 75 | SX | e8ylrSX1 | SX:1-142 | Ribosomal_S17,Ribosomal_S17_N | 2 → 2.1 → 2.1.1 |
| 76 | SY | e8ylrSY1 | SY:82-150 | Ribosomal_S15 | 616 → 616.1 → 616.1.1 |
| 77 | SY | e8ylrSY2 | SY:1-81 | Ribosomal_S13_N | 101 → 101.40 → 101.40.1 |
| 78 | SZ | e8ylrSZ1 | SZ:1-127 | Ribosomal_S11 | 2484 → 2484.1 → 2484.1.1 |
| 79 | T | e8ylrT1 | T:1-55 | Ribosomal_L19e | 637 → 637.1 → 637.1.1 |
| 80 | T | e8ylrT2 | T:56-188 | Ribosomal_L19e_C | 3050 → 3050.1 → 3050.1.1 |
| 81 | U | e8ylrU1 | U:69-171 | Ribosomal_L18A | 3115 → 3115.1 → 3115.1.1 |
| 82 | U | e8ylrU2 | U:1-68 | 3115.1.1.0 | 3115 → 3115.1 → 3115.1.1 |
| 83 | v | e8ylrv01 | v:333-426,v:745-746 | 4HB | 6088 → 6088.1 → 6088.1.1 |
| 84 | v | e8ylrv02 | v:427-629 | ABC_tran | 2004 → 2004.1 → 2004.1.1 |
| 85 | v | e8ylrv03 | v:630-642,v:702-744,v:747-761 | ABC_tran | 2004 → 2004.1 → 2004.1.1 |
| 86 | v | e8ylrv04 | v:762-865 | 4.8.1.0 | 4 → 4.8 → 4.8.1 |
| 87 | v | e8ylrv05 | v:866-974 | ABC_tran | 2004 → 2004.1 → 2004.1.1 |
| 88 | V | e8ylrV1 | V:1-159 | Ribosomal_L21e | 4 → 4.1 → 4.1.1 |
| 89 | W | e8ylrW1 | W:3-100 | Ribosomal_L22e | 3715 → 3715.1 → 3715.1.1 |
| 90 | x | e8ylrx1 | x:344-481 | GTP_EFTU_D2 | 1 → 1.1 → 1.1.7 |
| 91 | x | e8ylrx2 | x:482-560 | EFG_III | 304 → 304.24 → 304.24.1 |
| 92 | x | e8ylrx3 | x:726-842 | EFG_C | 304 → 304.24 → 304.24.1 |
| 93 | x | e8ylrx4 | x:561-725 | EFG_IV | 212 → 212.1 → 212.1.1 |
| 94 | x | e8ylrx5 | x:3-343 | GTP_EFTU, MMR_HSR1 | 2004 → 2004.1 → 2004.1.1 |
| 95 | X | e8ylrX1 | X:1-136 | Ribosomal_L14 | 3174 → 3174.1 → 3174.1.1 |
| 96 | Y | e8ylrY1 | Y:1-126 | Ribosomal_L24e | 377 → 377.1 → 377.1.1 |
| 97 | Z | e8ylrZ1 | Z:2-121 | Ribosomal_L23,Ribosomal_L23eN | 304 → 304.109 → 304.109.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors