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PDB 8YOP

0 chains94 ECOD domains
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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

All Domains (94)

#ChainDomain IDRangeFamilyClassification
1Lae8yopLa1La:2-148Ribosomal_L27A2490 → 2490.3 → 2490.3.1
2LAe8yopLA1LA:2-96Ribosomal_L22 → 2.1 → 2.1.1
3LAe8yopLA2LA:97-245Ribosomal_L2_C4 → 4.1 → 4.1.1
4Lbe8yopLb1Lb:2-50Ribosomal_L29e3212 → 3212.1 → 3212.1.1
5LBe8yopLB1LB:2-375Ribosomal_L31 → 1.1 → 1.1.7
6Lce8yopLc1Lc:13-106Ribosomal_L7Ae301 → 301.1 → 301.1.1
7LCe8yopLC1LC:3-297Ribosomal_L47559 → 7559.1 → 7559.1.1
8LCe8yopLC2LC:298-366Ribos_L4_asso_C3319 → 3319.1 → 3319.1.1
9Lde8yopLd1Ld:18-124Ribosomal_L31e259 → 259.1 → 259.1.1
10LDe8yopLD1LD:8-297Ribosomal_L18_c,Ribosomal_L5e2484 → 2484.1 → 2484.1.1
11Lee8yopLe1Le:2-129Ribosomal_L32e2490 → 2490.1 → 2490.1.1
12LEe8yopLE1LE:131-288Ribosomal_L6e4 → 4.1 → 4.1.1
13Lfe8yopLf1Lf:2-110Ribosomal_L35Ae1 → 1.1 → 1.1.7
14LFe8yopLF1LF:15-248Ribosomal_L30,Ribosomal_L30_N887 → 887.1 → 887.1.1
15Lge8yopLg1Lg:3-103Ribosomal_L34e377 → 377.12 → 377.12.1
16LGe8yopLG1LG:29-263Ribosomal_L7Ae301 → 301.1 → 301.1.1
17Lhe8yopLh1Lh:2-123Ribosomal_L29192 → 192.4 → 192.4.1
18LHe8yopLH1LH:1-87Ribosomal_L6318 → 318.1 → 318.1.1
19LHe8yopLH2LH:88-190Ribosomal_L6318 → 318.1 → 318.1.1
20Lie8yopLi1Li:2-103Ribosomal_L36e3166 → 3166.1 → 3166.1.1
21LIe8yopLI1LI:2-214Ribosomal_L16325 → 325.1 → 325.1.5
22Lje8yopLj1Lj:2-86Ribosomal_L37e375 → 375.1 → 375.1.1
23LJe8yopLJ1LJ:9-178Ribosomal_L5,Ribosomal_L5_C882 → 882.1 → 882.1.1
24Lke8yopLk1Lk:2-61Ribosomal_L38e896 → 896.1 → 896.1.1
25Lle8yopLl1Ll:2-51Ribosomal_L39585 → 585.1 → 585.1.1
26LLe8yopLL1LL:16-193Ribosomal_L13e3210 → 3210.1 → 3210.1.1
27Lme8yopLm1Lm:77-128Ribosomal_L40e375 → 375.1 → 375.1.1
28LMe8yopLM1LM:2-141KOW,Ribosomal_L14e4 → 4.1 → 4.1.1
29LNe8yopLN1LN:2-204Ribosomal_L15e304 → 304.109 → 304.109.1
30Loe8yopLo1Lo:2-105Ribosomal_L44375 → 375.1 → 375.1.1
31LOe8yopLO1LO:5-200Ribosomal_L132490 → 2490.2 → 2490.2.1
32Lpe8yopLp1Lp:2-92Ribosomal_L37ae375 → 375.1 → 375.1.1
33LPe8yopLP1LP:2-154Ribosomal_L22218 → 218.2 → 218.2.1
34LQe8yopLQ1LQ:5-188Ribosomal_L182490 → 2490.3 → 2490.3.1
35Lre8yopLr1Lr:2-131Ribosomal_L28e3209 → 3209.1 → 3209.1.1
36LRe8yopLR1LR:1-56Ribosomal_L19e637 → 637.1 → 637.1.1
37LRe8yopLR2LR:57-183Ribosomal_L19e_C3050 → 3050.1 → 3050.1.1
38Lse8yopLs1Ls:110-182RL10P_insert3310 → 3310.1 → 3310.1.1
39Lse8yopLs2Ls:5-109,Ls:183-202Ribosomal_L10304 → 304.60 → 304.60.1
40LSe8yopLS1LS:73-176Ribosomal_L18A3115 → 3115.1 → 3115.1.1
41LSe8yopLS2LS:4-723115.1.1.03115 → 3115.1 → 3115.1.1
42Lte8yopLt1Lt:74-163Ribosomal_L11101 → 101.1 → 101.1.16
43Lte8yopLt2Lt:1-73Ribosomal_L11_N3781 → 3781.1 → 3781.1.1
44LTe8yopLT1LT:2-160Ribosomal_L21e4 → 4.1 → 4.1.1
45LUe8yopLU1LU:16-117Ribosomal_L22e3715 → 3715.1 → 3715.1.1
46LVe8yopLV1LV:10-140Ribosomal_L143174 → 3174.1 → 3174.1.1
47LWe8yopLW1LW:1-63Ribosomal_L24e377 → 377.1 → 377.1.1
48LXe8yopLX1LX:38-156Ribosomal_L23,Ribosomal_L23eN304 → 304.109 → 304.109.1
49LYe8yopLY1LY:1-134KOW, Ribosomal_L264 → 4.1 → 4.1.1
50Lze8yopLz1Lz:58-153Ribosomal_L12007 → 2007.25 → 2007.25.1
51Lze8yopLz2Lz:1-57,Lz:154-217Ribosomal_L1898 → 898.1 → 898.1.1
52LZe8yopLZ1LZ:2-136KOW,Ribosomal_L27e4 → 4.1 → 4.1.1
53Sae8yopSa1Sa:2-99Ribosomal_S26e377 → 377.1 → 377.1.1
54SAe8yopSA1SA:2-219Ribosomal_S22007 → 2007.6 → 2007.6.1
55Sbe8yopSb1Sb:2-84Ribosomal_S27e375 → 375.1 → 375.1.1
56SBe8yopSB1SB:21-113Ribosomal_S3Ae239 → 239.5 → 239.5.1
57SBe8yopSB2SB:114-233Ribosomal_S3Ae230 → 230.6 → 230.6.1
58Sce8yopSc1Sc:5-68Ribosomal_S28e2 → 2.1 → 2.1.1
59SCe8yopSC1SC:57-134Ribosomal_S53274 → 3274.1 → 3274.1.1
60SCe8yopSC2SC:202-278Ribosomal_S5_C212 → 212.1 → 212.1.1
61SCe8yopSC3SC:135-201Ribosomal_S5330 → 330.1 → 330.1.1
62Sde8yopSd1Sd:4-56Ribosomal_S14377 → 377.1 → 377.1.1
63SDe8yopSD1SD:92-227Ribosomal_S3_C230 → 230.2 → 230.2.1
64SDe8yopSD2SD:1-99KH_2327 → 327.11 → 327.11.1
65See8yopSe1Se:6-56Ribosomal_S303168 → 3168.1 → 3168.1.1
66SEe8yopSE1SE:2-116Ribosomal_S4e,S4,RS4NT221 → 221.1 → 221.1.2
67SEe8yopSE2SE:176-263KOW,40S_S4_C4 → 4.1 → 4.1.1
68SEe8yopSE3SE:117-175Ribosomal_S4e2 → 2.1 → 2.1.1
69Sfe8yopSf1Sf:82-152Ribosomal_S27375 → 375.1 → 375.1.1
70SFe8yopSF1SF:14-204Ribosomal_S7167 → 167.1 → 167.1.1
71Sge8yopSg1Sg:2-314WD405 → 5.1 → 5.1.4
72SGe8yopSG1SG:1-237Ribosomal_S6e239 → 239.1 → 239.1.1
73SHe8yopSH1SH:108-193Ribosomal_S7e327 → 327.18 → 327.18.1
74SHe8yopSH2SH:5-107Ribosomal_S7e327 → 327.18 → 327.18.1
75SIe8yopSI1SI:2-207Ribosomal_S8e3174 → 3174.1 → 3174.1.1
76SJe8yopSJ1SJ:2-186Ribosomal_S4,S4221 → 221.1 → 221.1.2
77SKe8yopSK1SK:2-95S10_plectin101 → 101.1 → 101.1.2
78SLe8yopSL1SL:2-153Ribosomal_S17,Ribosomal_S17_N2 → 2.1 → 2.1.1
79SMe8yopSM1SM:11-132Ribosomal_L7Ae301 → 301.1 → 301.1.1
80SNe8yopSN1SN:83-151Ribosomal_S15616 → 616.1 → 616.1.1
81SNe8yopSN2SN:2-82Ribosomal_S13_N101 → 101.40 → 101.40.1
82SOe8yopSO1SO:16-151Ribosomal_S112484 → 2484.1 → 2484.1.1
83SPe8yopSP1SP:4-99Ribosomal_S19838 → 838.1 → 838.1.1
84SQe8yopSQ1SQ:6-146Ribosomal_S9212 → 212.1 → 212.1.1
85SRe8yopSR1SR:2-122Ribosomal_S17e101 → 101.1 → 101.1.17
86SSe8yopSS1SS:6-142Ribosomal_S13102 → 102.2 → 102.2.1
87STe8yopST1ST:4-144Ribosomal_S19e101 → 101.1 → 101.1.2
88SUe8yopSU1SU:18-118Ribosomal_S10304 → 304.44 → 304.44.1
89SVe8yopSV1SV:1-82Ribosomal_S21e3167 → 3167.1 → 3167.1.1
90SWe8yopSW1SW:68-130Ribosomal_S84988 → 4988.1 → 4988.1.1
91SWe8yopSW2SW:2-67Ribosomal_S8320 → 320.2 → 320.2.1
92SXe8yopSX1SX:7-140Ribosom_S12_S232 → 2.1 → 2.1.1
93SYe8yopSY1SY:4-125Ribosomal_S24e304 → 304.109 → 304.109.1
94SZe8yopSZ1SZ:41-115Ribosomal_S25101 → 101.1 → 101.1.2

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors