PDB 8YQV
0 chains22 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
Chain Aview chain
9 domainse8yqvA1(A:1-315,A:393-395,A:437-439,A:539-541,A:561-561,A:576-576,A:581-586,A:612-612,A:711-712,A:725-725,A:768-768,A:891-895,A:972-974,A:984-986,A:1098-1101)e8yqvA2(A:316-353,A:414-436,A:440-500)e8yqvA3(A:354-392,A:396-413)e8yqvA4(A:501-538,A:542-560,A:562-575,A:577-580,A:587-611,A:613-654)e8yqvA5(A:655-710,A:713-724,A:726-767,A:769-863)e8yqvA6(A:864-890,A:896-971,A:975-983,A:987-1041)e8yqvA7(A:1042-1082,A:1140-1141,A:1157-1158,A:1231-1233,A:1255-1257,A:1293-1437)e8yqvA8(A:1083-1097,A:1102-1115,A:1235-1254,A:1258-1292)e8yqvA9(A:1116-1139,A:1142-1156,A:1159-1230,A:1234-1234)
Chain Bview chain
7 domainse8yqvB1(B:30-155,B:157-220,B:300-304,B:313-315,B:321-322,B:329-330,B:343-346,B:352-353,B:363-366,B:426-583,B:609-610,B:707-708,B:719-719)e8yqvB2(B:156-156,B:221-299,B:305-312,B:316-320,B:323-328,B:331-342,B:347-351,B:354-362,B:367-425)e8yqvB3(B:584-608,B:611-675)e8yqvB4(B:676-676,B:702-706,B:709-718,B:720-848)e8yqvB5(B:849-885,B:1000-1123)e8yqvB6(B:886-999)e8yqvB7(B:1124-1210)
Chain Dview chain
2 domainsChain Eview chain
1 domainAll Domains (22)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | A | e8yqvA1 | A:1-315,A:393-395,A:437-439,A:539-541,A:561-561,A:576-576,A:581-586,A:612-612,A:711-712,A:725-725,A:768-768,A:891-895,A:972-974,A:984-986,A:1098-1101 | RNA_pol_Rpb1_1 | 4246 → 4246.1 → 4246.1.1 |
| 2 | A | e8yqvA2 | A:316-353,A:414-436,A:440-500 | RNA_pol_Rpb1_2 | 1 → 1.1 → 1.1.2 |
| 3 | A | e8yqvA3 | A:354-392,A:396-413 | RNA_pol_Rpb1_2 | 1 → 1.1 → 1.1.2 |
| 4 | A | e8yqvA4 | A:501-538,A:542-560,A:562-575,A:577-580,A:587-611,A:613-654 | RNA_pol_Rpb1_3 | 4959 → 4959.1 → 4959.1.1 |
| 5 | A | e8yqvA5 | A:655-710,A:713-724,A:726-767,A:769-863 | RNA_pol_Rpb1_5,RNA_pol_Rpb1_4 | 4958 → 4958.1 → 4958.1.1 |
| 6 | A | e8yqvA6 | A:864-890,A:896-971,A:975-983,A:987-1041 | RNA_pol_Rpb1_6 | 4957 → 4957.1 → 4957.1.1 |
| 7 | A | e8yqvA7 | A:1042-1082,A:1140-1141,A:1157-1158,A:1231-1233,A:1255-1257,A:1293-1437 | RNA_pol_Rpb1_5 | 275 → 275.1 → 275.1.1 |
| 8 | A | e8yqvA8 | A:1083-1097,A:1102-1115,A:1235-1254,A:1258-1292 | 4956.1.1.0 | 4956 → 4956.1 → 4956.1.1 |
| 9 | A | e8yqvA9 | A:1116-1139,A:1142-1156,A:1159-1230,A:1234-1234 | RNA_pol_Rpb1_7 | 4955 → 4955.1 → 4955.1.1 |
| 10 | B | e8yqvB1 | B:30-155,B:157-220,B:300-304,B:313-315,B:321-322,B:329-330,B:343-346,B:352-353,B:363-366,B:426-583,B:609-610,B:707-708,B:719-719 | RNA_pol_Rpb2_1,RNA_pol_Rpb2_3 | 4010 → 4010.1 → 4010.1.1 |
| 11 | B | e8yqvB2 | B:156-156,B:221-299,B:305-312,B:316-320,B:323-328,B:331-342,B:347-351,B:354-362,B:367-425 | RNA_pol_Rpb2_2 | 4041 → 4041.1 → 4041.1.1 |
| 12 | B | e8yqvB3 | B:584-608,B:611-675 | RNA_pol_Rpb2_4 | 4961 → 4961.1 → 4961.1.1 |
| 13 | B | e8yqvB4 | B:676-676,B:702-706,B:709-718,B:720-848 | RNA_pol_Rpb2_6 | 1 → 1.1 → 1.1.2 |
| 14 | B | e8yqvB5 | B:849-885,B:1000-1123 | RNA_pol_Rpb2_6 | 1 → 1.1 → 1.1.2 |
| 15 | B | e8yqvB6 | B:886-999 | RNA_pol_Rpb2_6 | 1 → 1.1 → 1.1.2 |
| 16 | B | e8yqvB7 | B:1124-1210 | RNA_pol_Rpb2_7 | 4043 → 4043.1 → 4043.1.1 |
| 17 | C | e8yqvC1 | C:42-76,C:185-186 | 305.1.1.0 | 305 → 305.1 → 305.1.1 |
| 18 | C | e8yqvC2 | C:77-184 | 240.2.1.0 | 240 → 240.2 → 240.2.1 |
| 19 | C | e8yqvC3 | C:298-358 | 305.1.1.0 | 305 → 305.1 → 305.1.1 |
| 20 | D | e8yqvD1 | D:114-134 | 2008.3.1.0 | 2008 → 2008.3 → 2008.3.1 |
| 21 | D | e8yqvD2 | D:135-205 | RNA_pol_Rpb5_C | 840 → 840.1 → 840.1.1 |
| 22 | E | e8yqvE1 | E:60-147 | RNA_pol_Rpb6 | 152 → 152.1 → 152.1.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors