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PDB 8Z9D

112 chains86 ECOD domains
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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain 5Photosystem II reaction center proteins PsbY, chloroplasticview chain
1 domain
Chain 55Photosystem II reaction center proteins PsbY, chloroplasticview chain
1 domain
Chain aPhotosystem II protein D1view chain
1 domain
Chain APhotosystem II protein D1view chain
1 domain
Chain AaPhotosystem II protein D1view chain
1 domain
Chain AAPhotosystem II protein D1view chain
1 domain
Chain bPhotosystem II CP47 reaction center proteinview chain
2 domains
Chain BPhotosystem II CP47 reaction center proteinview chain
2 domains
Chain BbPhotosystem II CP47 reaction center proteinview chain
2 domains
Chain BBPhotosystem II CP47 reaction center proteinview chain
2 domains
Chain cPhotosystem II CP43 reaction center proteinview chain
1 domain
Chain CPhotosystem II CP43 reaction center proteinview chain
1 domain
Chain CcPhotosystem II CP43 reaction center proteinview chain
1 domain
Chain CCPhotosystem II CP43 reaction center proteinview chain
1 domain
Chain dPhotosystem II D2 proteinview chain
1 domain
Chain DPhotosystem II D2 proteinview chain
1 domain
Chain DdPhotosystem II D2 proteinview chain
1 domain
Chain DDPhotosystem II D2 proteinview chain
1 domain
Chain eCytochrome b559 subunit alphaview chain
1 domain
Chain ECytochrome b559 subunit alphaview chain
1 domain
Chain EeCytochrome b559 subunit alphaview chain
1 domain
Chain EECytochrome b559 subunit alphaview chain
1 domain
Chain fCytochrome b559 subunit betaview chain
1 domain
Chain FCytochrome b559 subunit betaview chain
1 domain
Chain FfCytochrome b559 subunit betaview chain
1 domain
Chain FFCytochrome b559 subunit betaview chain
1 domain
Chain hPhotosystem II reaction center protein Hview chain
1 domain
Chain HPhotosystem II reaction center protein Hview chain
1 domain
Chain HhPhotosystem II reaction center protein Hview chain
1 domain
Chain HHPhotosystem II reaction center protein Hview chain
1 domain
Chain iPhotosystem II reaction center protein Iview chain
1 domain
Chain IPhotosystem II reaction center protein Iview chain
1 domain
Chain IiPhotosystem II reaction center protein Iview chain
1 domain
Chain IIPhotosystem II reaction center protein Iview chain
1 domain
Chain jPhotosystem II reaction center protein Jview chain
1 domain
Chain JPhotosystem II reaction center protein Jview chain
1 domain
Chain JjPhotosystem II reaction center protein Jview chain
1 domain
Chain JJPhotosystem II reaction center protein Jview chain
1 domain
Chain kPhotosystem II reaction center protein Kview chain
1 domain
Chain KPhotosystem II reaction center protein Kview chain
1 domain
Chain KkPhotosystem II reaction center protein Kview chain
1 domain
Chain KKPhotosystem II reaction center protein Kview chain
1 domain
Chain lPhotosystem II reaction center protein Lview chain
1 domain
Chain LPhotosystem II reaction center protein Lview chain
1 domain
Chain LlPhotosystem II reaction center protein Lview chain
1 domain
Chain LLPhotosystem II reaction center protein Lview chain
1 domain
Chain mPhotosystem II reaction center protein Mview chain
1 domain
Chain MPhotosystem II reaction center protein Mview chain
1 domain
Chain MmPhotosystem II reaction center protein Mview chain
1 domain
Chain MMPhotosystem II reaction center protein Mview chain
1 domain
Chain oOxygen-evolving enhancer protein 1, chloroplasticview chain
1 domain
Chain OOxygen-evolving enhancer protein 1, chloroplasticview chain
1 domain
Chain OoOxygen-evolving enhancer protein 1, chloroplasticview chain
1 domain
Chain OOOxygen-evolving enhancer protein 1, chloroplasticview chain
1 domain
Chain pOxygen-evolving enhancer protein 2, chloroplasticview chain
1 domain
Chain POxygen-evolving enhancer protein 2, chloroplasticview chain
1 domain
Chain PpOxygen-evolving enhancer protein 2, chloroplasticview chain
1 domain
Chain PPOxygen-evolving enhancer protein 2, chloroplasticview chain
1 domain
Chain qOxygen-evolving enhancer protein 3, chloroplasticview chain
1 domain
Chain QOxygen-evolving enhancer protein 3, chloroplasticview chain
1 domain
Chain QqOxygen-evolving enhancer protein 3, chloroplasticview chain
1 domain
Chain QQOxygen-evolving enhancer protein 3, chloroplasticview chain
1 domain
Chain sChlorophyll a-b binding protein, chloroplasticview chain
1 domain
Chain SChlorophyll a-b binding protein, chloroplasticview chain
1 domain
Chain SsChlorophyll a-b binding protein, chloroplasticview chain
1 domain
Chain SSChlorophyll a-b binding protein, chloroplasticview chain
1 domain
Chain tPhotosystem II reaction center protein Tview chain
1 domain
Chain TPhotosystem II reaction center protein Tview chain
1 domain
Chain TtPhotosystem II reaction center protein Tview chain
1 domain
Chain TTPhotosystem II reaction center protein Tview chain
1 domain
Chain wPhotosystem II reaction center W protein, chloroplasticview chain
1 domain
Chain WPhotosystem II reaction center W protein, chloroplasticview chain
1 domain
Chain WwPhotosystem II reaction center W protein, chloroplasticview chain
1 domain
Chain WWPhotosystem II reaction center W protein, chloroplasticview chain
1 domain
Chain xPhotosystem II reaction center X protein, chloroplasticview chain
1 domain
Chain XPhotosystem II reaction center X protein, chloroplasticview chain
1 domain
Chain XxPhotosystem II reaction center X protein, chloroplasticview chain
1 domain
Chain XXPhotosystem II reaction center X protein, chloroplasticview chain
1 domain
Chain zPhotosystem II reaction center protein Zview chain
1 domain
Chain ZPhotosystem II reaction center protein Zview chain
1 domain
Chain ZzPhotosystem II reaction center protein Zview chain
1 domain
Chain ZZPhotosystem II reaction center protein Zview chain
1 domain

All Domains (86)

#ChainDomain IDRangeFamilyClassification
15e8z9d5015:7-39PsbY6106 → 6106.1 → 6106.1.1
255e8z9d55155:92-124,55:164-215PsbY6106 → 6106.1 → 6106.1.1
3ae8z9da1a:1-302Photo_RC5037 → 5037.1 → 5037.1.1
4Ae8z9dA01A:1-302Photo_RC5037 → 5037.1 → 5037.1.1
5Aae8z9dAa1Aa:1-302Photo_RC5037 → 5037.1 → 5037.1.1
6AAe8z9dAA1AA:1-302Photo_RC5037 → 5037.1 → 5037.1.1
7be8z9db1b:2-328,b:445-488PSII5075 → 5075.1 → 5075.1.1
8be8z9db2b:329-444PSII3744 → 3744.1 → 3744.1.1
9Be8z9dB1B:2-328,B:445-488PSII5075 → 5075.1 → 5075.1.1
10Be8z9dB2B:329-444PSII3744 → 3744.1 → 3744.1.1
11Bbe8z9dBb1Bb:2-328,Bb:445-488PSII5075 → 5075.1 → 5075.1.1
12Bbe8z9dBb2Bb:329-444PSII3744 → 3744.1 → 3744.1.1
13BBe8z9dBB1BB:2-328,BB:445-488PSII5075 → 5075.1 → 5075.1.1
14BBe8z9dBB2BB:329-444PSII3744 → 3744.1 → 3744.1.1
15ce8z9dc1c:24-472PSII5075 → 5075.1 → 5075.1.1
16Ce8z9dC1C:24-472PSII5075 → 5075.1 → 5075.1.1
17Cce8z9dCc1Cc:24-472PSII5075 → 5075.1 → 5075.1.1
18CCe8z9dCC1CC:24-472PSII5075 → 5075.1 → 5075.1.1
19de8z9dd1d:1-299Photo_RC5037 → 5037.1 → 5037.1.1
20De8z9dD01D:0-298Photo_RC5037 → 5037.1 → 5037.1.1
21Dde8z9dDd1Dd:1-299Photo_RC5037 → 5037.1 → 5037.1.1
22DDe8z9dDD1DD:1-299Photo_RC5037 → 5037.1 → 5037.1.1
23ee8z9de1e:4-82Cytochrom_B559,Cytochrom_B559a5036 → 5036.1 → 5036.1.1
24Ee8z9dE1E:4-82Cytochrom_B559,Cytochrom_B559a5036 → 5036.1 → 5036.1.1
25Eee8z9dEe1Ee:4-82Cytochrom_B559,Cytochrom_B559a5036 → 5036.1 → 5036.1.1
26EEe8z9dEE1EE:4-82Cytochrom_B559,Cytochrom_B559a5036 → 5036.1 → 5036.1.1
27fe8z9df1f:8-39Cytochrom_B5595036 → 5036.1 → 5036.1.1
28Fe8z9dF1F:8-39Cytochrom_B5595036 → 5036.1 → 5036.1.1
29Ffe8z9dFf1Ff:8-39Cytochrom_B5595036 → 5036.1 → 5036.1.1
30FFe8z9dFF1FF:8-39Cytochrom_B5595036 → 5036.1 → 5036.1.1
31he8z9dh1h:14-72PsbH5032 → 5032.1 → 5032.1.1
32He8z9dH1H:14-72PsbH5032 → 5032.1 → 5032.1.1
33Hhe8z9dHh1Hh:14-72PsbH5032 → 5032.1 → 5032.1.1
34HHe8z9dHH1HH:14-72PsbH5032 → 5032.1 → 5032.1.1
35ie8z9di1i:1-35PsbI5035 → 5035.1 → 5035.1.1
36Ie8z9dI1I:1-35PsbI5035 → 5035.1 → 5035.1.1
37Iie8z9dIi1Ii:1-35PsbI5035 → 5035.1 → 5035.1.1
38IIe8z9dII1II:1-35PsbI5035 → 5035.1 → 5035.1.1
39je8z9dj1j:6-39PsbJ5031 → 5031.1 → 5031.1.1
40Je8z9dJ1J:6-39PsbJ5031 → 5031.1 → 5031.1.1
41Jje8z9dJj1Jj:6-39PsbJ5031 → 5031.1 → 5031.1.1
42JJe8z9dJJ1JJ:6-39PsbJ5031 → 5031.1 → 5031.1.1
43ke8z9dk1k:23-59PsbK5034 → 5034.1 → 5034.1.1
44Ke8z9dK1K:23-59PsbK5034 → 5034.1 → 5034.1.1
45Kke8z9dKk1Kk:23-59PsbK5034 → 5034.1 → 5034.1.1
46KKe8z9dKK1KK:23-59PsbK5034 → 5034.1 → 5034.1.1
47le8z9dl1l:2-38PsbL5030 → 5030.1 → 5030.1.1
48Le8z9dL1L:2-38PsbL5030 → 5030.1 → 5030.1.1
49Lle8z9dLl1Ll:2-38PsbL5030 → 5030.1 → 5030.1.1
50LLe8z9dLL1LL:2-38PsbL5030 → 5030.1 → 5030.1.1
51me8z9dm1m:2-34PsbM5033 → 5033.1 → 5033.1.1
52Me8z9dM1M:2-34PsbM5033 → 5033.1 → 5033.1.1
53Mme8z9dMm1Mm:2-34PsbM5033 → 5033.1 → 5033.1.1
54MMe8z9dMM1MM:2-34PsbM5033 → 5033.1 → 5033.1.1
55oe8z9do1o:89-331MSP5084 → 5084.1 → 5084.1.1
56Oe8z9dO1O:89-331MSP5084 → 5084.1 → 5084.1.1
57Ooe8z9dOo1Oo:89-331MSP5084 → 5084.1 → 5084.1.1
58OOe8z9dOO1OO:89-331MSP5084 → 5084.1 → 5084.1.1
59pe8z9dp1p:96-267PsbP881 → 881.1 → 881.1.1
60Pe8z9dP1P:96-267PsbP881 → 881.1 → 881.1.1
61Ppe8z9dPp1Pp:96-267PsbP881 → 881.1 → 881.1.1
62PPe8z9dPP1PP:96-267PsbP881 → 881.1 → 881.1.1
63qe8z9dq1q:84-96,q:117-231PsbQ601 → 601.18 → 601.18.1
64Qe8z9dQ1Q:84-96,Q:117-231PsbQ601 → 601.18 → 601.18.1
65Qqe8z9dQq1Qq:84-96,Qq:117-231PsbQ601 → 601.18 → 601.18.1
66QQe8z9dQQ1QQ:84-96,QQ:117-231PsbQ601 → 601.18 → 601.18.1
67se8z9ds1s:74-287Chloroa_b-bind5077 → 5077.1 → 5077.1.1
68Se8z9dS1S:74-287Chloroa_b-bind5077 → 5077.1 → 5077.1.1
69Sse8z9dSs1Ss:74-287Chloroa_b-bind5077 → 5077.1 → 5077.1.1
70SSe8z9dSS1SS:74-287Chloroa_b-bind5077 → 5077.1 → 5077.1.1
71te8z9dt1t:1-30PsbT3390 → 3390.1 → 3390.1.1
72Te8z9dT1T:1-30PsbT3390 → 3390.1 → 3390.1.1
73Tte8z9dTt1Tt:1-30PsbT3390 → 3390.1 → 3390.1.1
74TTe8z9dTT1TT:1-30PsbT3390 → 3390.1 → 3390.1.1
75we8z9dw1w:84-137PsbW1084 → 1084.1 → 1084.1.1
76We8z9dW1W:84-137PsbW1084 → 1084.1 → 1084.1.1
77Wwe8z9dWw1Ww:84-137PsbW1084 → 1084.1 → 1084.1.1
78WWe8z9dWW1WW:84-137PsbW1084 → 1084.1 → 1084.1.1
79xe8z9dx1x:79-113PsbX3493 → 3493.1 → 3493.1.1
80Xe8z9dX1X:79-113PsbX3493 → 3493.1 → 3493.1.1
81Xxe8z9dXx1Xx:79-113PsbX3493 → 3493.1 → 3493.1.1
82XXe8z9dXX1XX:79-113PsbX3493 → 3493.1 → 3493.1.1
83ze8z9dz1z:2-62Ycf95044 → 5044.1 → 5044.1.1
84Ze8z9dZ1Z:2-62Ycf95044 → 5044.1 → 5044.1.1
85Zze8z9dZz1Zz:2-62Ycf95044 → 5044.1 → 5044.1.1
86ZZe8z9dZZ1ZZ:2-62Ycf95044 → 5044.1 → 5044.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors