PDB 9BCU
0 chains36 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
Chain Bview chain
7 domainsChain Cview chain
4 domainsChain Dview chain
2 domainsChain Eview chain
2 domainsChain Fview chain
1 domainChain Gview chain
2 domainsChain Hview chain
1 domainChain Iview chain
1 domainChain Jview chain
4 domainsChain Kview chain
1 domainChain Lview chain
1 domainChain Mview chain
4 domainsChain Nview chain
1 domainChain Pview chain
1 domainAll Domains (36)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | A | e9bcuA1 | A:6-312 | RNA_pol_Rpb1_1 | 4246 → 4246.1 → 4246.1.1 |
| 2 | A | e9bcuA2 | A:667-898 | RNA_pol_Rpb1_5,RNA_pol_Rpb1_4 | 4958 → 4958.1 → 4958.1.1 |
| 3 | A | e9bcuA3 | A:313-499 | RNA_pol_Rpb1_2 | 1 → 1.1 → 1.1.2 |
| 4 | A | e9bcuA4 | A:500-666 | RNA_pol_Rpb1_3 | 4959 → 4959.1 → 4959.1.1 |
| 5 | B | e9bcuB1 | B:10-172,B:347-485 | RNA_pol_Rpb2_1,RNA_pol_Rpb2_3 | 4010 → 4010.1 → 4010.1.1 |
| 6 | B | e9bcuB2 | B:574-713 | 4042.1.1.0 | 4042 → 4042.1 → 4042.1.1 |
| 7 | B | e9bcuB3 | B:1000-1009,B:1032-1122 | 4043.1.1.0 | 4043 → 4043.1 → 4043.1.1 |
| 8 | B | e9bcuB4 | B:485-574 | RNA_pol_Rpb2_4 | 4961 → 4961.1 → 4961.1.1 |
| 9 | B | e9bcuB5 | B:714-751,B:877-999 | RNA_pol_Rpb2_6 | 1 → 1.1 → 1.1.2 |
| 10 | B | e9bcuB6 | B:752-876 | RNA_pol_Rpb2_6 | 325 → 325.1 → 325.1.7 |
| 11 | B | e9bcuB7 | B:173-346 | RNA_pol_Rpb2_2 | 4041 → 4041.1 → 4041.1.1 |
| 12 | C | e9bcuC1 | C:60-109,C:268-386 | RNA_pol_Rpb1_5 | 4954 → 4954.1 → 4954.1.1 |
| 13 | C | e9bcuC2 | C:7-59 | 4957.1.1.0 | 4957 → 4957.1 → 4957.1.1 |
| 14 | C | e9bcuC3 | C:142-224 | 4955.1.1.0 | 4955 → 4955.1 → 4955.1.1 |
| 15 | C | e9bcuC4 | C:110-141,C:225-267 | 4956.1.1.0 | 4956 → 4956.1 → 4956.1.1 |
| 16 | D | e9bcuD1 | D:1-40,D:151-178,D:180-182,D:184-258 | RNA_pol_L | 305 → 305.1 → 305.1.1 |
| 17 | D | e9bcuD2 | D:41-150,D:179-179,D:183-183 | RNA_pol_A_bac | 240 → 240.2 → 240.2.1 |
| 18 | E | e9bcuE1 | E:79-181 | S1 | 2 → 2.1 → 2.1.1 |
| 19 | E | e9bcuE2 | E:1-78 | SHS2_Rpb7-N | 872 → 872.1 → 872.1.1 |
| 20 | F | e9bcuF1 | F:1-114 | RNA_pol_Rpb4 | 102 → 102.1 → 102.1.1 |
| 21 | G | e9bcuG1 | G:1-86 | Spt5-NGN | 304 → 304.17 → 304.17.1 |
| 22 | G | e9bcuG2 | G:87-152 | KOW | 4 → 4.1 → 4.1.1 |
| 23 | H | e9bcuH1 | H:6-81 | RNA_pol_Rpb5_C | 840 → 840.1 → 840.1.1 |
| 24 | I | e9bcuI1 | I:1-73 | Spt4 | 375 → 375.1 → 375.1.1 |
| 25 | J | e9bcuJ1 | J:1-75,J:222-223,J:234-239,J:356-357,J:394-395 | KH_7 | 327 → 327.11 → 327.11.1 |
| 26 | J | e9bcuJ2 | J:76-146 | KH_2 | 327 → 327.11 → 327.11.1 |
| 27 | J | e9bcuJ3 | J:187-221,J:224-233,J:240-329,J:331-355,J:358-393,J:396-403,J:482-483,J:490-492,J:569-572,J:595-648 | RMMBL,Lactamase_B_6 | 247 → 247.1 → 247.1.1 |
| 28 | J | e9bcuJ4 | J:330-330,J:404-481,J:484-489,J:493-568,J:573-594 | Beta-Casp | 2004 → 2004.1 → 2004.1.1 |
| 29 | K | e9bcuK1 | K:1-60 | RNA_pol_Rpb6 | 152 → 152.1 → 152.1.1 |
| 30 | L | e9bcuL1 | L:1-94 | RNA_pol_L_2 | 305 → 305.1 → 305.1.1 |
| 31 | M | e9bcuM1 | M:1-75,M:222-223,M:234-239,M:356-357,M:394-395 | KH_7 | 327 → 327.11 → 327.11.1 |
| 32 | M | e9bcuM2 | M:76-146 | KH_2 | 327 → 327.11 → 327.11.1 |
| 33 | M | e9bcuM3 | M:187-221,M:224-233,M:240-329,M:331-355,M:358-393,M:396-403,M:482-483,M:490-492,M:569-572,M:595-648 | RMMBL,Lactamase_B_6 | 247 → 247.1 → 247.1.1 |
| 34 | M | e9bcuM4 | M:330-330,M:404-481,M:484-489,M:493-568,M:573-594 | Beta-Casp | 2004 → 2004.1 → 2004.1.1 |
| 35 | N | e9bcuN1 | N:1-63 | RNA_pol_N | 101 → 101.4 → 101.4.1 |
| 36 | P | e9bcuP1 | P:8-49 | DNA_RNApol_7kD | 375 → 375.1 → 375.1.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors