PDB 9BZ0
0 chains38 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
Chain aview chain
1 domainChain Aview chain
10 domainse9bz0A1(A:1-345,A:569-570,A:618-618,A:668-672)e9bz0A2(A:346-389,A:451-536)e9bz0A3(A:390-450)e9bz0A4(A:537-568,A:571-617,A:619-667,A:673-686)e9bz0A5(A:687-895,A:897-898)e9bz0A6(A:896-896,A:899-927)e9bz0A7(A:1056-1088)e9bz0A8(A:1089-1138,A:1172-1181,A:1194-1213,A:1242-1247,A:1261-1272,A:1282-1284,A:1308-1320,A:1328-1332,A:1367-1475)e9bz0A9(A:1139-1170,A:1306-1307,A:1321-1327,A:1333-1366)e9bz0A10(A:1171-1171,A:1182-1193,A:1214-1241,A:1248-1260,A:1273-1281,A:1285-1305)
Chain Bview chain
7 domainsChain cview chain
1 domainChain Cview chain
2 domainsChain dview chain
4 domainsChain Dview chain
1 domainChain Eview chain
2 domainsChain Fview chain
1 domainChain Gview chain
2 domainsChain Hview chain
1 domainChain Iview chain
2 domainsChain Jview chain
1 domainChain Kview chain
1 domainChain Lview chain
1 domainChain Mview chain
1 domainAll Domains (38)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | a | e9bz0a1 | a:1-365 | WD40 | 5 → 5.1 → 5.1.4 |
| 2 | A | e9bz0A1 | A:1-345,A:569-570,A:618-618,A:668-672 | RNA_pol_Rpb1_1 | 4246 → 4246.1 → 4246.1.1 |
| 3 | A | e9bz0A2 | A:346-389,A:451-536 | RNA_pol_Rpb1_2 | 1 → 1.1 → 1.1.2 |
| 4 | A | e9bz0A3 | A:390-450 | RNA_pol_Rpb1_2 | 1 → 1.1 → 1.1.2 |
| 5 | A | e9bz0A4 | A:537-568,A:571-617,A:619-667,A:673-686 | RNA_pol_Rpb1_3 | 4959 → 4959.1 → 4959.1.1 |
| 6 | A | e9bz0A5 | A:687-895,A:897-898 | RNA_pol_Rpb1_5,RNA_pol_Rpb1_4 | 4958 → 4958.1 → 4958.1.1 |
| 7 | A | e9bz0A6 | A:896-896,A:899-927 | RNA_pol_Rpb1_6 | 4957 → 4957.1 → 4957.1.1 |
| 8 | A | e9bz0A7 | A:1056-1088 | RNA_pol_Rpb1_6 | 4957 → 4957.1 → 4957.1.1 |
| 9 | A | e9bz0A8 | A:1089-1138,A:1172-1181,A:1194-1213,A:1242-1247,A:1261-1272,A:1282-1284,A:1308-1320,A:1328-1332,A:1367-1475 | RNA_pol_Rpb1_5 | 275 → 275.1 → 275.1.1 |
| 10 | A | e9bz0A9 | A:1139-1170,A:1306-1307,A:1321-1327,A:1333-1366 | 4956.1.1.0 | 4956 → 4956.1 → 4956.1.1 |
| 11 | A | e9bz0A10 | A:1171-1171,A:1182-1193,A:1214-1241,A:1248-1260,A:1273-1281,A:1285-1305 | RNA_pol_Rpb1_7 | 4955 → 4955.1 → 4955.1.1 |
| 12 | B | e9bz0B1 | B:696-845 | 4042.1.1.0 | 4042 → 4042.1 → 4042.1.1 |
| 13 | B | e9bz0B2 | B:606-695 | RNA_pol_Rpb2_4 | 4961 → 4961.1 → 4961.1.1 |
| 14 | B | e9bz0B3 | B:883-1006 | RNA_pol_Rpb2_6 | 325 → 325.1 → 325.1.7 |
| 15 | B | e9bz0B4 | B:1131-1251 | RNA_pol_Rpb2_6,RNA_pol_Rpb2_7 | 4043 → 4043.1 → 4043.1.1 |
| 16 | B | e9bz0B5 | B:278-468 | RNA_pol_Rpb2_2 | 4041 → 4041.1 → 4041.1.1 |
| 17 | B | e9bz0B6 | B:846-882,B:1007-1130 | RNA_pol_Rpb2_6 | 1 → 1.1 → 1.1.2 |
| 18 | B | e9bz0B7 | B:93-144,B:164-277,B:469-605 | RNA_pol_Rpb2_1,RNA_pol_Rpb2_3 | 4010 → 4010.1 → 4010.1.1 |
| 19 | c | e9bz0c1 | c:6-146 | UVSSA_N | 109 → 109.4 → 109.4.1 |
| 20 | C | e9bz0C1 | C:2-42,C:179-271 | RNA_pol_L | 305 → 305.1 → 305.1.1 |
| 21 | C | e9bz0C2 | C:43-178 | RNA_pol_A_bac | 240 → 240.2 → 240.2.1 |
| 22 | d | e9bz0d1 | d:4-354 | MMS1_N | 5 → 5.1 → 5.1.4 |
| 23 | d | e9bz0d2 | d:355-391,d:705-1022 | CPSF_A | 5 → 5.1 → 5.1.4 |
| 24 | d | e9bz0d3 | d:392-704 | Beta-prop_RSE1_2nd | 5 → 5.1 → 5.1.4 |
| 25 | d | e9bz0d4 | d:1023-1143 | CPSF_A | 101 → 101.1 → 101.1.1 |
| 26 | D | e9bz0D1 | D:14-142 | RNA_pol_Rpb4 | 102 → 102.1 → 102.1.1 |
| 27 | E | e9bz0E1 | E:139-210 | RNA_pol_Rpb5_C | 840 → 840.1 → 840.1.1 |
| 28 | E | e9bz0E2 | E:2-138 | RNA_pol_Rpb5_N | 2008 → 2008.3 → 2008.3.1 |
| 29 | F | e9bz0F1 | F:46-127 | RNA_pol_Rpb6 | 152 → 152.1 → 152.1.1 |
| 30 | G | e9bz0G1 | G:79-171 | S1 | 2 → 2.1 → 2.1.1 |
| 31 | G | e9bz0G2 | G:1-77 | SHS2_Rpb7-N | 872 → 872.1 → 872.1.1 |
| 32 | H | e9bz0H1 | H:1-150 | RNA_pol_Rpb8 | 2 → 2.1 → 2.1.1 |
| 33 | I | e9bz0I1 | I:1-59 | RNA_POL_M_15KD | 375 → 375.1 → 375.1.1 |
| 34 | I | e9bz0I2 | I:60-125 | TFIIS_C | 375 → 375.1 → 375.1.1 |
| 35 | J | e9bz0J1 | J:1-67 | RNA_pol_N | 101 → 101.4 → 101.4.1 |
| 36 | K | e9bz0K1 | K:1-115 | RNA_pol_L_2 | 305 → 305.1 → 305.1.1 |
| 37 | L | e9bz0L1 | L:15-58 | DNA_RNApol_7kD | 375 → 375.1 → 375.1.1 |
| 38 | M | e9bz0M01 | M:-1-83 | Elf1 | 375 → 375.1 → 375.1.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors