PDB 9EH0
0 chains64 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
Chain aview chain
1 domainChain Aview chain
10 domainse9eh0A1(A:1-345,A:569-570,A:618-618,A:668-672)e9eh0A2(A:346-389,A:451-536)e9eh0A3(A:390-450)e9eh0A4(A:537-568,A:571-617,A:619-667,A:673-686)e9eh0A5(A:687-895,A:897-898)e9eh0A6(A:896-896,A:899-927)e9eh0A7(A:1056-1088)e9eh0A8(A:1089-1138,A:1172-1181,A:1194-1213,A:1242-1247,A:1261-1272,A:1282-1284,A:1308-1320,A:1328-1332,A:1367-1475)e9eh0A9(A:1139-1170,A:1306-1307,A:1321-1327,A:1333-1366)e9eh0A10(A:1171-1171,A:1182-1193,A:1214-1241,A:1248-1260,A:1273-1281,A:1285-1305)
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1 domainChain Bview chain
7 domainsChain cview chain
1 domainChain Cview chain
2 domainsChain dview chain
1 domainChain Dview chain
1 domainChain eview chain
1 domainChain Eview chain
2 domainsChain fview chain
1 domainChain Fview chain
1 domainChain gview chain
1 domainChain Gview chain
2 domainsChain hview chain
1 domainChain Hview chain
1 domainChain Iview chain
2 domainsChain Jview chain
1 domainChain Kview chain
1 domainChain Lview chain
1 domainChain Mview chain
9 domainsChain Sview chain
2 domainsChain Wview chain
1 domainChain Xview chain
2 domainsChain Yview chain
1 domainAll Domains (64)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | a | e9eh0a1 | a:39-134 | Histone | 148 → 148.1 → 148.1.1 |
| 2 | A | e9eh0A1 | A:1-345,A:569-570,A:618-618,A:668-672 | RNA_pol_Rpb1_1 | 4246 → 4246.1 → 4246.1.1 |
| 3 | A | e9eh0A2 | A:346-389,A:451-536 | RNA_pol_Rpb1_2 | 1 → 1.1 → 1.1.2 |
| 4 | A | e9eh0A3 | A:390-450 | RNA_pol_Rpb1_2 | 1 → 1.1 → 1.1.2 |
| 5 | A | e9eh0A4 | A:537-568,A:571-617,A:619-667,A:673-686 | RNA_pol_Rpb1_3 | 4959 → 4959.1 → 4959.1.1 |
| 6 | A | e9eh0A5 | A:687-895,A:897-898 | RNA_pol_Rpb1_5,RNA_pol_Rpb1_4 | 4958 → 4958.1 → 4958.1.1 |
| 7 | A | e9eh0A6 | A:896-896,A:899-927 | RNA_pol_Rpb1_6 | 4957 → 4957.1 → 4957.1.1 |
| 8 | A | e9eh0A7 | A:1056-1088 | RNA_pol_Rpb1_6 | 4957 → 4957.1 → 4957.1.1 |
| 9 | A | e9eh0A8 | A:1089-1138,A:1172-1181,A:1194-1213,A:1242-1247,A:1261-1272,A:1282-1284,A:1308-1320,A:1328-1332,A:1367-1475 | RNA_pol_Rpb1_5 | 275 → 275.1 → 275.1.1 |
| 10 | A | e9eh0A9 | A:1139-1170,A:1306-1307,A:1321-1327,A:1333-1366 | 4956.1.1.0 | 4956 → 4956.1 → 4956.1.1 |
| 11 | A | e9eh0A10 | A:1171-1171,A:1182-1193,A:1214-1241,A:1248-1260,A:1273-1281,A:1285-1305 | RNA_pol_Rpb1_7 | 4955 → 4955.1 → 4955.1.1 |
| 12 | b | e9eh0b1 | b:24-102 | 148.1.1.0 | 148 → 148.1 → 148.1.1 |
| 13 | B | e9eh0B1 | B:696-845 | 4042.1.1.0 | 4042 → 4042.1 → 4042.1.1 |
| 14 | B | e9eh0B2 | B:606-695 | RNA_pol_Rpb2_4 | 4961 → 4961.1 → 4961.1.1 |
| 15 | B | e9eh0B3 | B:883-1006 | RNA_pol_Rpb2_6 | 325 → 325.1 → 325.1.7 |
| 16 | B | e9eh0B4 | B:1131-1251 | RNA_pol_Rpb2_6,RNA_pol_Rpb2_7 | 4043 → 4043.1 → 4043.1.1 |
| 17 | B | e9eh0B5 | B:278-468 | RNA_pol_Rpb2_2 | 4041 → 4041.1 → 4041.1.1 |
| 18 | B | e9eh0B6 | B:846-882,B:1007-1130 | RNA_pol_Rpb2_6 | 1 → 1.1 → 1.1.2 |
| 19 | B | e9eh0B7 | B:93-144,B:164-277,B:469-605 | RNA_pol_Rpb2_1,RNA_pol_Rpb2_3 | 4010 → 4010.1 → 4010.1.1 |
| 20 | c | e9eh0c1 | c:15-120 | Histone,Histone_H2A_C | 148 → 148.1 → 148.1.1 |
| 21 | C | e9eh0C1 | C:2-42,C:179-271 | RNA_pol_L | 305 → 305.1 → 305.1.1 |
| 22 | C | e9eh0C2 | C:43-178 | RNA_pol_A_bac | 240 → 240.2 → 240.2.1 |
| 23 | d | e9eh0d1 | d:31-122 | Histone | 148 → 148.1 → 148.1.1 |
| 24 | D | e9eh0D1 | D:14-142 | RNA_pol_Rpb4 | 102 → 102.1 → 102.1.1 |
| 25 | e | e9eh0e1 | e:39-134 | Histone | 148 → 148.1 → 148.1.1 |
| 26 | E | e9eh0E1 | E:139-210 | RNA_pol_Rpb5_C | 840 → 840.1 → 840.1.1 |
| 27 | E | e9eh0E2 | E:2-138 | RNA_pol_Rpb5_N | 2008 → 2008.3 → 2008.3.1 |
| 28 | f | e9eh0f1 | f:24-102 | 148.1.1.0 | 148 → 148.1 → 148.1.1 |
| 29 | F | e9eh0F1 | F:46-127 | RNA_pol_Rpb6 | 152 → 152.1 → 152.1.1 |
| 30 | g | e9eh0g1 | g:15-120 | Histone,Histone_H2A_C | 148 → 148.1 → 148.1.1 |
| 31 | G | e9eh0G1 | G:79-171 | S1 | 2 → 2.1 → 2.1.1 |
| 32 | G | e9eh0G2 | G:1-77 | SHS2_Rpb7-N | 872 → 872.1 → 872.1.1 |
| 33 | h | e9eh0h1 | h:31-122 | Histone | 148 → 148.1 → 148.1.1 |
| 34 | H | e9eh0H1 | H:1-150 | RNA_pol_Rpb8 | 2 → 2.1 → 2.1.1 |
| 35 | I | e9eh0I1 | I:1-59 | RNA_POL_M_15KD | 375 → 375.1 → 375.1.1 |
| 36 | I | e9eh0I2 | I:60-125 | TFIIS_C | 375 → 375.1 → 375.1.1 |
| 37 | J | e9eh0J1 | J:1-67 | RNA_pol_N | 101 → 101.4 → 101.4.1 |
| 38 | K | e9eh0K1 | K:1-115 | RNA_pol_L_2 | 305 → 305.1 → 305.1.1 |
| 39 | L | e9eh0L1 | L:15-58 | DNA_RNApol_7kD | 375 → 375.1 → 375.1.1 |
| 40 | M | e9eh0M1 | M:287-407 | HTH_44 | 101 → 101.26 → 101.26.1 |
| 41 | M | e9eh0M2 | M:1425-1522 | SH2_2 | 214 → 214.1 → 214.1.1 |
| 42 | M | e9eh0M3 | M:1148-1179,M:1229-1290 | Spt6_S1 | 2 → 2.1 → 2.1.1 |
| 43 | M | e9eh0M4 | M:948-1042 | HHH_7 | 102 → 102.1 → 102.1.1 |
| 44 | M | e9eh0M5 | M:1333-1424 | SH2_2 | 214 → 214.1 → 214.1.1 |
| 45 | M | e9eh0M6 | M:408-424,M:445-473 | 632.13.1.0 | 632 → 632.13 → 632.13.1 |
| 46 | M | e9eh0M7 | M:1043-1147 | HHH_9 | 102 → 102.1 → 102.1.1 |
| 47 | M | e9eh0M8 | M:760-947 | YqgF | 2484 → 2484.1 → 2484.1.1 |
| 48 | M | e9eh0M9 | M:473-480,M:541-759 | Tex_central_region | 4342 → 4342.1 → 4342.1.1 |
| 49 | Q | e9eh0Q1 | Q:1-246,Q:391-393 | TPR_8, TPR_16, TPR_19 | 109 → 109.4 → 109.4.1 |
| 50 | Q | e9eh0Q2 | Q:306-390,Q:394-409 | TPR_2,TPR_8 | 109 → 109.4 → 109.4.1 |
| 51 | Q | e9eh0Q3 | Q:502-763 | TPR_8, TPR_16, TPR_19 | 109 → 109.4 → 109.4.1 |
| 52 | S | e9eh0S1 | S:244-304 | TFIIS_C | 375 → 375.1 → 375.1.1 |
| 53 | S | e9eh0S2 | S:135-243 | TFIIS_M | 103 → 103.4 → 103.4.1 |
| 54 | W | e9eh0W1 | W:5-304 | WD40, ANAPC4_WD40, Beta-prop_NOL10_N | 5 → 5.1 → 5.1.4 |
| 55 | X | e9eh0X1 | X:1-111 | CDC73_N | 101 → 101.46 → 101.46.1 |
| 56 | X | e9eh0X2 | X:358-523 | CDC73_C | 2004 → 2004.1 → 2004.1.1 |
| 57 | Y | e9eh0Y1 | Y:6-121 | Spt4 | 375 → 375.1 → 375.1.1 |
| 58 | Z | e9eh0Z1 | Z:270-396 | KOW1_SPT5 | 4 → 4.1 → 4.1.1 |
| 59 | Z | e9eh0Z2 | Z:176-269 | Spt5-NGN | 304 → 304.17 → 304.17.1 |
| 60 | Z | e9eh0Z3 | Z:471-526 | KOW | 4 → 4.1 → 4.1.1 |
| 61 | Z | e9eh0Z4 | Z:416-470 | KOW2_Spt5 | 4 → 4.1 → 4.1.1 |
| 62 | Z | e9eh0Z5 | Z:581-646 | KOW4_SPT5 | 4 → 4.1 → 4.1.1 |
| 63 | Z | e9eh0Z6 | Z:703-754 | KOW5_SPT5 | 4 → 4.1 → 4.1.1 |
| 64 | Z | e9eh0Z7 | Z:527-580 | KOWx_SPT5 | 4 → 4.1 → 4.1.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors