PDB 9EH1
0 chains60 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
Chain aview chain
1 domainChain Aview chain
9 domainse9eh1A01(A:10-131,A:166-242,A:290-429,A:619-624)e9eh1A02(A:430-465,A:540-609)e9eh1A03(A:466-539)e9eh1A04(A:610-618,A:625-758)e9eh1A05(A:759-896)e9eh1A06(A:1056-1088)e9eh1A07(A:1089-1138,A:1172-1181,A:1194-1213,A:1242-1247,A:1261-1272,A:1282-1284,A:1308-1320,A:1328-1332,A:1367-1475)e9eh1A08(A:1139-1170,A:1306-1307,A:1321-1327,A:1333-1366)e9eh1A09(A:1171,A:1182-1193,A:1214-1241,A:1248-1260,A:1273-1281,A:1285-1305)
Chain Bview chain
7 domainse9eh1B01(B:56-206,B:225-229,B:247-254,B:403-538,B:546-547,B:551-559,B:604-610,B:625-631,B:660-667,B:685-690,B:839-842,B:871-876,B:881-887,B:896,B:910)e9eh1B02(B:207-224,B:230-246,B:255-402)e9eh1B03(B:539-545,B:548-550,B:560-603,B:611-624,B:632-650)e9eh1B04(B:651-659,B:668-684,B:691-779)e9eh1B05(B:780-816,B:941-1066)e9eh1B06(B:817-838,B:843-870,B:877-880,B:888-895,B:897-909,B:911-940)e9eh1B07(B:1067-1123)
Chain cview chain
1 domainChain dview chain
1 domainChain Dview chain
1 domainChain eview chain
1 domainChain Eview chain
2 domainsChain Fview chain
1 domainChain gview chain
1 domainChain Gview chain
2 domainsChain hview chain
1 domainChain Hview chain
1 domainChain Iview chain
2 domainsChain Jview chain
1 domainChain Kview chain
1 domainChain Lview chain
2 domainsChain Mview chain
8 domainsChain Oview chain
1 domainChain Rview chain
1 domainChain Sview chain
2 domainsChain Wview chain
1 domainChain Yview chain
1 domainAll Domains (60)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | a | e9eh1a1 | a:39-134 | Histone | 148 → 148.1 → 148.1.1 |
| 2 | A | e9eh1A01 | A:10-131,A:166-242,A:290-429,A:619-624 | RNA_pol_Rpb1_2, RNA_pol_Rpb1_1 | 4246 → 4246.1 → 4246.1.1 |
| 3 | A | e9eh1A02 | A:430-465,A:540-609 | RNA_pol_Rpb1_2, RNA_pol_Rpb1_3 | 1 → 1.1 → 1.1.2 |
| 4 | A | e9eh1A03 | A:466-539 | RNA_pol_Rpb1_2 | 1 → 1.1 → 1.1.2 |
| 5 | A | e9eh1A04 | A:610-618,A:625-758 | RNA_pol_Rpb1_3 | 4959 → 4959.1 → 4959.1.1 |
| 6 | A | e9eh1A05 | A:759-896 | RNA_pol_Rpb1_5,RNA_pol_Rpb1_4 | 4958 → 4958.1 → 4958.1.1 |
| 7 | A | e9eh1A06 | A:1056-1088 | RNA_pol_Rpb1_6 | 4957 → 4957.1 → 4957.1.1 |
| 8 | A | e9eh1A07 | A:1089-1138,A:1172-1181,A:1194-1213,A:1242-1247,A:1261-1272,A:1282-1284,A:1308-1320,A:1328-1332,A:1367-1475 | RNA_pol_Rpb1_5 | 275 → 275.1 → 275.1.1 |
| 9 | A | e9eh1A08 | A:1139-1170,A:1306-1307,A:1321-1327,A:1333-1366 | 4956.1.1.0 | 4956 → 4956.1 → 4956.1.1 |
| 10 | A | e9eh1A09 | A:1171,A:1182-1193,A:1214-1241,A:1248-1260,A:1273-1281,A:1285-1305 | RNA_pol_Rpb1_7 | 4955 → 4955.1 → 4955.1.1 |
| 11 | B | e9eh1B01 | B:56-206,B:225-229,B:247-254,B:403-538,B:546-547,B:551-559,B:604-610,B:625-631,B:660-667,B:685-690,B:839-842,B:871-876,B:881-887,B:896,B:910 | RNA_pol_Rpb2_1,RNA_pol_Rpb2_3 | 4010 → 4010.1 → 4010.1.1 |
| 12 | B | e9eh1B02 | B:207-224,B:230-246,B:255-402 | RNA_pol_Rpb2_2 | 4041 → 4041.1 → 4041.1.1 |
| 13 | B | e9eh1B03 | B:539-545,B:548-550,B:560-603,B:611-624,B:632-650 | RNA_pol_Rpb2_4 | 4961 → 4961.1 → 4961.1.1 |
| 14 | B | e9eh1B04 | B:651-659,B:668-684,B:691-779 | RNA_pol_Rpb2_6,RNA_pol_Rpb2_5 | 4042 → 4042.1 → 4042.1.1 |
| 15 | B | e9eh1B05 | B:780-816,B:941-1066 | RNA_pol_Rpb2_6 | 1 → 1.1 → 1.1.2 |
| 16 | B | e9eh1B06 | B:817-838,B:843-870,B:877-880,B:888-895,B:897-909,B:911-940 | RNA_pol_Rpb2_6 | 1 → 1.1 → 1.1.2 |
| 17 | B | e9eh1B07 | B:1067-1123 | RNA_pol_Rpb2_7 | 4043 → 4043.1 → 4043.1.1 |
| 18 | c | e9eh1c1 | c:15-120 | Histone,Histone_H2A_C | 148 → 148.1 → 148.1.1 |
| 19 | C | e9eh1C01 | C:2-45,C:123-126,C:182-265 | RNA_pol_L | 305 → 305.1 → 305.1.1 |
| 20 | C | e9eh1C02 | C:46-122,C:127-181 | RNA_pol_A_bac | 240 → 240.2 → 240.2.1 |
| 21 | d | e9eh1d1 | d:31-122 | Histone | 148 → 148.1 → 148.1.1 |
| 22 | D | e9eh1D01 | D:14-139 | RNA_pol_Rpb4 | 102 → 102.1 → 102.1.1 |
| 23 | e | e9eh1e1 | e:39-134 | Histone | 148 → 148.1 → 148.1.1 |
| 24 | E | e9eh1E01 | E:2-139 | RNA_pol_Rpb5_N | 2008 → 2008.3 → 2008.3.1 |
| 25 | E | e9eh1E02 | E:140-210 | RNA_pol_Rpb5_C | 840 → 840.1 → 840.1.1 |
| 26 | F | e9eh1F01 | F:91-127 | 152.1.1.0 | 152 → 152.1 → 152.1.1 |
| 27 | g | e9eh1g1 | g:15-120 | Histone,Histone_H2A_C | 148 → 148.1 → 148.1.1 |
| 28 | G | e9eh1G1 | G:1-78 | SHS2_Rpb7-N | 872 → 872.1 → 872.1.1 |
| 29 | G | e9eh1G2 | G:79-171 | S1 | 2 → 2.1 → 2.1.1 |
| 30 | h | e9eh1h1 | h:31-122 | Histone | 148 → 148.1 → 148.1.1 |
| 31 | H | e9eh1H01 | H:2-150 | RNA_pol_Rpb8 | 2 → 2.1 → 2.1.1 |
| 32 | I | e9eh1I01 | I:10-67 | RNA_POL_M_15KD | 375 → 375.1 → 375.1.1 |
| 33 | I | e9eh1I02 | I:68-125 | TFIIS_C | 375 → 375.1 → 375.1.1 |
| 34 | J | e9eh1J01 | J:1-66 | RNA_pol_N | 101 → 101.4 → 101.4.1 |
| 35 | K | e9eh1K1 | K:1-115 | RNA_pol_L_2 | 305 → 305.1 → 305.1.1 |
| 36 | L | e9eh1L01 | L:47-74,L:121-239 | 70.3.1.0 | 70 → 70.3 → 70.3.1 |
| 37 | L | e9eh1L02 | L:75-120 | 3358.1.1.0 | 3358 → 3358.1 → 3358.1.1 |
| 38 | M | e9eh1M1 | M:77-177,M:227-245,M:337-337,M:431-432 | 101.26.1.0 | 101 → 101.26 → 101.26.1 |
| 39 | M | e9eh1M2 | M:178-218 | 632.13.1.0 | 632 → 632.13 → 632.13.1 |
| 40 | M | e9eh1M3 | M:219-226,M:246-336,M:338-430,M:433-469,M:471-472 | YqgF | 2484 → 2484.1 → 2484.1.1 |
| 41 | M | e9eh1M4 | M:470-470,M:473-633 | HHH_7, YqgF | 2484 → 2484.1 → 2484.1.1 |
| 42 | M | e9eh1M5 | M:634-713 | HHH_9 | 102 → 102.1 → 102.1.1 |
| 43 | M | e9eh1M6 | M:714-829 | Spt6_S1 | 2 → 2.1 → 2.1.1 |
| 44 | M | e9eh1M7 | M:830-912 | SH2_2 | 214 → 214.1 → 214.1.1 |
| 45 | M | e9eh1M8 | M:913-1002 | SH2_2 | 214 → 214.1 → 214.1.1 |
| 46 | O | e9eh1O01 | O:584-685 | Med26 | 611 → 611.3 → 611.3.1 |
| 47 | Q | e9eh1Q01 | Q:3-246 | TPR_8, TPR_19 | 109 → 109.4 → 109.4.1 |
| 48 | Q | e9eh1Q02 | Q:308-383 | TPR_2,TPR_8 | 109 → 109.4 → 109.4.1 |
| 49 | Q | e9eh1Q03 | Q:502-804 | TPR_8, TPR_16, TPR_19 | 109 → 109.4 → 109.4.1 |
| 50 | R | e9eh1R1 | R:1-145 | Plus-3 | 4 → 4.18 → 4.18.1 |
| 51 | S | e9eh1S01 | S:132-240 | TFIIS_M | 103 → 103.4 → 103.4.1 |
| 52 | S | e9eh1S02 | S:241-301 | TFIIS_C | 375 → 375.1 → 375.1.1 |
| 53 | W | e9eh1W01 | W:41-301 | WD40, ANAPC4_WD40, Beta-prop_NOL10_N | 5 → 5.1 → 5.1.4 |
| 54 | Y | e9eh1Y01 | Y:2-117 | Spt4 | 375 → 375.1 → 375.1.1 |
| 55 | Z | e9eh1Z01 | Z:176-272 | Spt5-NGN | 304 → 304.17 → 304.17.1 |
| 56 | Z | e9eh1Z02 | Z:273-396 | KOW1_SPT5 | 4 → 4.1 → 4.1.1 |
| 57 | Z | e9eh1Z03 | Z:462-535 | KOW | 4 → 4.1 → 4.1.1 |
| 58 | Z | e9eh1Z04 | Z:536-594 | KOWx_SPT5 | 4 → 4.1 → 4.1.1 |
| 59 | Z | e9eh1Z05 | Z:595-646 | KOW4_SPT5 | 4 → 4.1 → 4.1.1 |
| 60 | Z | e9eh1Z06 | Z:703-757 | KOW5_SPT5 | 4 → 4.1 → 4.1.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors