PDB 9ER2
0 chains41 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
Chain aview chain
1 domainChain Aview chain
10 domainse9er2A1(A:1-345,A:569-570,A:618-618,A:668-672)e9er2A2(A:346-389,A:451-536)e9er2A3(A:390-450)e9er2A4(A:537-568,A:571-617,A:619-667,A:673-686)e9er2A5(A:687-895,A:897-898)e9er2A6(A:896-896,A:899-927)e9er2A7(A:1056-1088)e9er2A8(A:1089-1138,A:1172-1181,A:1194-1213,A:1242-1247,A:1261-1272,A:1282-1284,A:1308-1320,A:1328-1332,A:1367-1475)e9er2A9(A:1139-1170,A:1306-1307,A:1321-1327,A:1333-1366)e9er2A10(A:1171-1171,A:1182-1193,A:1214-1241,A:1248-1260,A:1273-1281,A:1285-1305)
Chain bview chain
2 domainsChain Bview chain
7 domainsChain cview chain
1 domainChain Cview chain
2 domainsChain dview chain
4 domainsChain Dview chain
1 domainChain Eview chain
2 domainsChain Fview chain
1 domainChain Gview chain
2 domainsChain Hview chain
1 domainChain Iview chain
2 domainsChain Jview chain
1 domainChain Kview chain
1 domainChain Lview chain
1 domainChain Mview chain
1 domainChain Oview chain
1 domainAll Domains (41)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | a | e9er2a1 | a:1-365 | WD40 | 5 → 5.1 → 5.1.4 |
| 2 | A | e9er2A1 | A:1-345,A:569-570,A:618-618,A:668-672 | RNA_pol_Rpb1_1 | 4246 → 4246.1 → 4246.1.1 |
| 3 | A | e9er2A2 | A:346-389,A:451-536 | RNA_pol_Rpb1_2 | 1 → 1.1 → 1.1.2 |
| 4 | A | e9er2A3 | A:390-450 | RNA_pol_Rpb1_2 | 1 → 1.1 → 1.1.2 |
| 5 | A | e9er2A4 | A:537-568,A:571-617,A:619-667,A:673-686 | RNA_pol_Rpb1_3 | 4959 → 4959.1 → 4959.1.1 |
| 6 | A | e9er2A5 | A:687-895,A:897-898 | RNA_pol_Rpb1_5,RNA_pol_Rpb1_4 | 4958 → 4958.1 → 4958.1.1 |
| 7 | A | e9er2A6 | A:896-896,A:899-927 | RNA_pol_Rpb1_6 | 4957 → 4957.1 → 4957.1.1 |
| 8 | A | e9er2A7 | A:1056-1088 | RNA_pol_Rpb1_6 | 4957 → 4957.1 → 4957.1.1 |
| 9 | A | e9er2A8 | A:1089-1138,A:1172-1181,A:1194-1213,A:1242-1247,A:1261-1272,A:1282-1284,A:1308-1320,A:1328-1332,A:1367-1475 | RNA_pol_Rpb1_5 | 275 → 275.1 → 275.1.1 |
| 10 | A | e9er2A9 | A:1139-1170,A:1306-1307,A:1321-1327,A:1333-1366 | 4956.1.1.0 | 4956 → 4956.1 → 4956.1.1 |
| 11 | A | e9er2A10 | A:1171-1171,A:1182-1193,A:1214-1241,A:1248-1260,A:1273-1281,A:1285-1305 | RNA_pol_Rpb1_7 | 4955 → 4955.1 → 4955.1.1 |
| 12 | b | e9er2b1 | b:490-754 | SNF2-rel_dom | 2004 → 2004.1 → 2004.1.1 |
| 13 | b | e9er2b2 | b:755-1025,b:1383-1399 | SNF2-rel_dom,Helicase_C | 2004 → 2004.1 → 2004.1.1 |
| 14 | B | e9er2B1 | B:1047-1167 | RNA_pol_Rpb2_6,RNA_pol_Rpb2_7 | 4043 → 4043.1 → 4043.1.1 |
| 15 | B | e9er2B2 | B:522-611 | RNA_pol_Rpb2_4 | 4961 → 4961.1 → 4961.1.1 |
| 16 | B | e9er2B3 | B:9-60,B:80-193,B:385-521 | RNA_pol_Rpb2_1,RNA_pol_Rpb2_3 | 4010 → 4010.1 → 4010.1.1 |
| 17 | B | e9er2B4 | B:799-922 | RNA_pol_Rpb2_6 | 325 → 325.1 → 325.1.7 |
| 18 | B | e9er2B5 | B:762-798,B:923-1046 | RNA_pol_Rpb2_6 | 1 → 1.1 → 1.1.2 |
| 19 | B | e9er2B6 | B:612-761 | 4042.1.1.0 | 4042 → 4042.1 → 4042.1.1 |
| 20 | B | e9er2B7 | B:194-384 | RNA_pol_Rpb2_2 | 4041 → 4041.1 → 4041.1.1 |
| 21 | c | e9er2c1 | c:3-143 | UVSSA_N | 109 → 109.4 → 109.4.1 |
| 22 | C | e9er2C1 | C:2-42,C:179-271 | RNA_pol_L | 305 → 305.1 → 305.1.1 |
| 23 | C | e9er2C2 | C:43-178 | RNA_pol_A_bac | 240 → 240.2 → 240.2.1 |
| 24 | d | e9er2d1 | d:1045-1140 | CPSF_A | 101 → 101.1 → 101.1.1 |
| 25 | d | e9er2d2 | d:356-396,d:709-766,d:786-1044 | CPSF_A | 5 → 5.1 → 5.1.4 |
| 26 | d | e9er2d3 | d:2-355 | MMS1_N | 5 → 5.1 → 5.1.4 |
| 27 | d | e9er2d4 | d:393-708 | Beta-prop_RSE1_2nd | 5 → 5.1 → 5.1.4 |
| 28 | D | e9er2D1 | D:14-142 | RNA_pol_Rpb4 | 102 → 102.1 → 102.1.1 |
| 29 | E | e9er2E1 | E:139-210 | RNA_pol_Rpb5_C | 840 → 840.1 → 840.1.1 |
| 30 | E | e9er2E2 | E:2-138 | RNA_pol_Rpb5_N | 2008 → 2008.3 → 2008.3.1 |
| 31 | F | e9er2F1 | F:46-127 | RNA_pol_Rpb6 | 152 → 152.1 → 152.1.1 |
| 32 | G | e9er2G1 | G:79-171 | S1 | 2 → 2.1 → 2.1.1 |
| 33 | G | e9er2G2 | G:1-77 | SHS2_Rpb7-N | 872 → 872.1 → 872.1.1 |
| 34 | H | e9er2H1 | H:1-150 | RNA_pol_Rpb8 | 2 → 2.1 → 2.1.1 |
| 35 | I | e9er2I1 | I:1-59 | RNA_POL_M_15KD | 375 → 375.1 → 375.1.1 |
| 36 | I | e9er2I2 | I:60-125 | TFIIS_C | 375 → 375.1 → 375.1.1 |
| 37 | J | e9er2J1 | J:1-67 | RNA_pol_N | 101 → 101.4 → 101.4.1 |
| 38 | K | e9er2K1 | K:1-115 | RNA_pol_L_2 | 305 → 305.1 → 305.1.1 |
| 39 | L | e9er2L1 | L:15-58 | DNA_RNApol_7kD | 375 → 375.1 → 375.1.1 |
| 40 | M | e9er2M1 | M:3-143 | UVSSA_N | 109 → 109.4 → 109.4.1 |
| 41 | O | e9er2O01 | O:20-83 | Elf1 | 375 → 375.1 → 375.1.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors