ECODEvolutionary Classification of Protein Domains

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PDB 9EVX

38 chains40 ECOD domains

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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain aPhotosystem II protein D1 1view chain

1 domain

e9evxa1(a:12-344)

Chain APhotosystem II protein D1 1view chain

1 domain

e9evxA1(A:12-344)

Chain bPhotosystem II CP47 reaction center proteinview chain

2 domains

e9evxb1(b:6-328,b:445-481)e9evxb2(b:329-444)

Chain BPhotosystem II CP47 reaction center proteinview chain

2 domains

e9evxB1(B:6-328,B:445-481)e9evxB2(B:329-444)

Chain cPhotosystem II CP43 reaction center proteinview chain

1 domain

e9evxc1(c:14-461)

Chain CPhotosystem II CP43 reaction center proteinview chain

1 domain

e9evxC1(C:14-461)

Chain dPhotosystem II D2 proteinview chain

1 domain

e9evxd1(d:34-221,d:244-352)

Chain DPhotosystem II D2 proteinview chain

1 domain

e9evxD1(D:34-221,D:244-352)

Chain eCytochrome b559 subunit alphaview chain

1 domain

e9evxe1(e:9-84)

Chain ECytochrome b559 subunit alphaview chain

1 domain

e9evxE1(E:9-84)

Chain fCytochrome b559 subunit betaview chain

1 domain

e9evxf1(f:13-45)

Chain FCytochrome b559 subunit betaview chain

1 domain

e9evxF1(F:13-45)

Chain hPhotosystem II reaction center protein Hview chain

1 domain

e9evxh1(h:1-66)

Chain HPhotosystem II reaction center protein Hview chain

1 domain

e9evxH01(H:1-66)

Chain iPhotosystem II reaction center protein Iview chain

1 domain

e9evxi1(i:1-38)

Chain IPhotosystem II reaction center protein Iview chain

1 domain

e9evxI1(I:1-38)

Chain jPhotosystem II reaction center protein Jview chain

1 domain

e9evxj1(j:3-40)

Chain JPhotosystem II reaction center protein Jview chain

1 domain

e9evxJ1(J:3-40)

Chain kPhotosystem II reaction center protein Kview chain

1 domain

e9evxk1(k:1-37)

Chain KPhotosystem II reaction center protein Kview chain

1 domain

e9evxK1(K:1-37)

Chain lPhotosystem II reaction center protein Lview chain

1 domain

e9evxl1(l:1-37)

Chain LPhotosystem II reaction center protein Lview chain

1 domain

e9evxL1(L:1-37)

Chain mPhotosystem II reaction center protein Mview chain

1 domain

e9evxm1(m:1-30)

Chain MPhotosystem II reaction center protein Mview chain

1 domain

e9evxM1(M:1-30)

Chain oPhotosystem II manganese-stabilizing polypeptideview chain

1 domain

e9evxo1(o:30-272)

Chain OPhotosystem II manganese-stabilizing polypeptideview chain

1 domain

e9evxO1(O:30-272)

Chain tPhotosystem II reaction center protein Tview chain

1 domain

e9evxt1(t:1-31)

Chain TPhotosystem II reaction center protein Tview chain

1 domain

e9evxT1(T:1-31)

Chain uPhotosystem II 12 kDa extrinsic proteinview chain

1 domain

e9evxu1(u:30-134)

Chain UPhotosystem II 12 kDa extrinsic proteinview chain

1 domain

e9evxU1(U:30-134)

Chain vCytochrome c-550view chain

1 domain

e9evxv1(v:28-163)

Chain VCytochrome c-550view chain

1 domain

e9evxV1(V:28-163)

Chain xPhotosystem II reaction center X proteinview chain

1 domain

e9evxx1(x:2-38)

Chain XPhotosystem II reaction center X proteinview chain

1 domain

e9evxX1(X:2-38)

Chain yPhotosystem II reaction center protein Ycf12view chain

1 domain

e9evxy1(y:19-46)

Chain YPhotosystem II reaction center protein Ycf12view chain

1 domain

e9evxY1(Y:19-46)

Chain zPhotosystem II reaction center protein Zview chain

1 domain

e9evxz1(z:1-58)

Chain ZPhotosystem II reaction center protein Zview chain

1 domain

e9evxZ1(Z:1-58)

All Domains (40)

#	Chain	Domain ID	Range	Family	Classification
1	a	e9evxa1	a:12-344	Photo_RC	5037 → 5037.1 → 5037.1.1
2	A	e9evxA1	A:12-344	Photo_RC	5037 → 5037.1 → 5037.1.1
3	b	e9evxb1	b:6-328,b:445-481	PSII	5075 → 5075.1 → 5075.1.1
4	b	e9evxb2	b:329-444	PSII	3744 → 3744.1 → 3744.1.1
5	B	e9evxB1	B:6-328,B:445-481	PSII	5075 → 5075.1 → 5075.1.1
6	B	e9evxB2	B:329-444	PSII	3744 → 3744.1 → 3744.1.1
7	c	e9evxc1	c:14-461	PSII	5075 → 5075.1 → 5075.1.1
8	C	e9evxC1	C:14-461	PSII	5075 → 5075.1 → 5075.1.1
9	d	e9evxd1	d:34-221,d:244-352	Photo_RC	5037 → 5037.1 → 5037.1.1
10	D	e9evxD1	D:34-221,D:244-352	Photo_RC	5037 → 5037.1 → 5037.1.1
11	e	e9evxe1	e:9-84	Cytochrom_B559,Cytochrom_B559a	5036 → 5036.1 → 5036.1.1
12	E	e9evxE1	E:9-84	Cytochrom_B559,Cytochrom_B559a	5036 → 5036.1 → 5036.1.1
13	f	e9evxf1	f:13-45	Cytochrom_B559	5036 → 5036.1 → 5036.1.1
14	F	e9evxF1	F:13-45	Cytochrom_B559	5036 → 5036.1 → 5036.1.1
15	h	e9evxh1	h:1-66	PsbH	5032 → 5032.1 → 5032.1.1
16	H	e9evxH01	H:1-66	PsbH	5032 → 5032.1 → 5032.1.1
17	i	e9evxi1	i:1-38	PsbI	5035 → 5035.1 → 5035.1.1
18	I	e9evxI1	I:1-38	PsbI	5035 → 5035.1 → 5035.1.1
19	j	e9evxj1	j:3-40	PsbJ	5031 → 5031.1 → 5031.1.1
20	J	e9evxJ1	J:3-40	PsbJ	5031 → 5031.1 → 5031.1.1
21	k	e9evxk1	k:1-37	PsbK	5034 → 5034.1 → 5034.1.1
22	K	e9evxK1	K:1-37	PsbK	5034 → 5034.1 → 5034.1.1
23	l	e9evxl1	l:1-37	PsbL	5030 → 5030.1 → 5030.1.1
24	L	e9evxL1	L:1-37	PsbL	5030 → 5030.1 → 5030.1.1
25	m	e9evxm1	m:1-30	PsbM	5033 → 5033.1 → 5033.1.1
26	M	e9evxM1	M:1-30	PsbM	5033 → 5033.1 → 5033.1.1
27	o	e9evxo1	o:30-272	MSP	5084 → 5084.1 → 5084.1.1
28	O	e9evxO1	O:30-272	MSP	5084 → 5084.1 → 5084.1.1
29	t	e9evxt1	t:1-31	PsbT	3390 → 3390.1 → 3390.1.1
30	T	e9evxT1	T:1-31	PsbT	3390 → 3390.1 → 3390.1.1
31	u	e9evxu1	u:30-134	PsbU	102 → 102.1 → 102.1.1
32	U	e9evxU1	U:30-134	PsbU	102 → 102.1 → 102.1.1
33	v	e9evxv1	v:28-163	Cytochrom_C550	107 → 107.1 → 107.1.1
34	V	e9evxV1	V:28-163	Cytochrom_C550	107 → 107.1 → 107.1.1
35	x	e9evxx1	x:2-38	PsbX	3493 → 3493.1 → 3493.1.1
36	X	e9evxX1	X:2-38	PsbX	3493 → 3493.1 → 3493.1.1
37	y	e9evxy1	y:19-46	PSII_Ycf12	3379 → 3379.1 → 3379.1.1
38	Y	e9evxY1	Y:19-46	PSII_Ycf12	3379 → 3379.1 → 3379.1.1
39	z	e9evxz1	z:1-58	Ycf9	5044 → 5044.1 → 5044.1.1
40	Z	e9evxZ1	Z:1-58	Ycf9	5044 → 5044.1 → 5044.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors