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PDB 9FD2

0 chains36 ECOD domains
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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

All Domains (36)

#ChainDomain IDRangeFamilyClassification
1ae9fd2a1a:1-365WD405 → 5.1 → 5.1.4
2Ae9fd2A1A:686-894RNA_pol_Rpb1_5,RNA_pol_Rpb1_44958 → 4958.1 → 4958.1.1
3Ae9fd2A2A:895-1082RNA_pol_Rpb1_64957 → 4957.1 → 4957.1.1
4Ae9fd2A3A:534-685RNA_pol_Rpb1_34959 → 4959.1 → 4959.1.1
5Ae9fd2A4A:1152-1308RNA_pol_Rpb1_74955 → 4955.1 → 4955.1.1
6Ae9fd2A5A:364-533RNA_pol_Rpb1_21 → 1.1 → 1.1.2
7Ae9fd2A6A:1083-1135,A:1361-1415,A:1469-1484RNA_pol_Rpb1_54954 → 4954.1 → 4954.1.1
8Ae9fd2A7A:1136-1151,A:1309-13604956.1.1.04956 → 4956.1 → 4956.1.1
9be9fd2b1b:1-376,b:505-506,b:581-581,b:759-763,b:798-798,b:845-846,b:862-863,b:932-932,b:1037-1044MMS1_N5 → 5.1 → 5.1.4
10be9fd2b2b:377-414,b:731-758,b:764-797,b:799-844,b:847-861,b:864-931,b:933-1036,b:1045-1063CPSF_A101 → 101.1 → 101.1.1
11be9fd2b3b:415-504,b:507-580,b:582-730Beta-prop_RSE1_2nd5 → 5.1 → 5.1.4
12be9fd2b4b:1064-1132CPSF_A101 → 101.1 → 101.1.1
13Be9fd2B1B:182-334,B:351-355,B:373-380,B:531-666,B:672-673,B:677-685,B:730-736,B:751-757,B:786-793,B:811-816,B:965-968,B:997-1002,B:1007-1013,B:1022-1022,B:1036-1036RNA_pol_Rpb2_1,RNA_pol_Rpb2_34010 → 4010.1 → 4010.1.1
14Be9fd2B2B:335-350,B:356-372,B:381-530RNA_pol_Rpb2_24041 → 4041.1 → 4041.1.1
15Be9fd2B3B:667-671,B:674-676,B:686-729,B:737-750,B:758-778RNA_pol_Rpb2_44961 → 4961.1 → 4961.1.1
16Be9fd2B4B:779-785,B:794-810,B:817-907RNA_pol_Rpb2_6,RNA_pol_Rpb2_54042 → 4042.1 → 4042.1.1
17Be9fd2B5B:908-943,B:1069-1194RNA_pol_Rpb2_61 → 1.1 → 1.1.2
18Be9fd2B6B:944-964,B:969-996,B:1003-1006,B:1014-1021,B:1023-1035,B:1037-1068RNA_pol_Rpb2_61 → 1.1 → 1.1.2
19Be9fd2B7B:1195-1249RNA_pol_Rpb2_74043 → 4043.1 → 4043.1.1
20Ce9fd2C1C:2-42,C:179-271RNA_pol_L305 → 305.1 → 305.1.1
21Ce9fd2C2C:43-178RNA_pol_A_bac240 → 240.2 → 240.2.1
22De9fd2D1D:14-142RNA_pol_Rpb4102 → 102.1 → 102.1.1
23ee9fd2e1e:490-754SNF2-rel_dom2004 → 2004.1 → 2004.1.1
24ee9fd2e2e:755-1025,e:1383-1399SNF2-rel_dom,Helicase_C2004 → 2004.1 → 2004.1.1
25Ee9fd2E1E:139-210RNA_pol_Rpb5_C840 → 840.1 → 840.1.1
26Ee9fd2E2E:2-138RNA_pol_Rpb5_N2008 → 2008.3 → 2008.3.1
27fe9fd2f01f:-1-83Elf1375 → 375.1 → 375.1.1
28Fe9fd2F1F:46-127RNA_pol_Rpb6152 → 152.1 → 152.1.1
29Ge9fd2G1G:79-171S12 → 2.1 → 2.1.1
30Ge9fd2G2G:1-77SHS2_Rpb7-N872 → 872.1 → 872.1.1
31He9fd2H1H:1-150RNA_pol_Rpb82 → 2.1 → 2.1.1
32Ie9fd2I1I:1-59RNA_POL_M_15KD375 → 375.1 → 375.1.1
33Ie9fd2I2I:60-125TFIIS_C375 → 375.1 → 375.1.1
34Je9fd2J1J:1-67RNA_pol_N101 → 101.4 → 101.4.1
35Ke9fd2K1K:1-115RNA_pol_L_2305 → 305.1 → 305.1.1
36Le9fd2L1L:15-58DNA_RNApol_7kD375 → 375.1 → 375.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors