PDB 9M98
0 chains20 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
Chain Aview chain
2 domainsChain Bview chain
3 domainsChain Cview chain
7 domainsChain Dview chain
5 domainsChain Eview chain
1 domainChain Mview chain
2 domainsAll Domains (20)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | A | e9m98A1 | A:3-47,A:170-226 | RNA_pol_L | 305 → 305.1 → 305.1.1 |
| 2 | A | e9m98A2 | A:48-169 | RNA_pol_A_bac | 240 → 240.2 → 240.2.1 |
| 3 | B | e9m98B1 | B:1-47 | RBP11-like subunits of RNA polymerase | 305 → 305.1 → 305.1.1 |
| 4 | B | e9m98B2 | B:48-173 | Insert subdomain of RNA polymerase alpha subunit | 240 → 240.2 → 240.2.1 |
| 5 | B | e9m98B3 | B:174-233 | RBP11-like subunits of RNA polymerase | 305 → 305.1 → 305.1.1 |
| 6 | C | e9m98C1 | C:176-370 | RNA_pol_Rpb2_2 | 4041 → 4041.1 → 4041.1.1 |
| 7 | C | e9m98C2 | C:704-741,C:874-1029 | RNA_pol_Rpb2_6 | 1 → 1.1 → 1.1.2 |
| 8 | C | e9m98C3 | C:1030-1134 | RNA_pol_Rpb2_6,RNA_pol_Rpb2_7 | 4043 → 4043.1 → 4043.1.1 |
| 9 | C | e9m98C4 | C:497-632 | RNA_pol_Rpb2_45 | 4042 → 4042.1 → 4042.1.1 |
| 10 | C | e9m98C5 | C:24-175,C:371-496 | RNA_pol_Rpb2_1,RNA_pol_Rpb2_3 | 4010 → 4010.1 → 4010.1.1 |
| 11 | C | e9m98C6 | C:633-703 | 325.1.7.0 | 325 → 325.1 → 325.1.7 |
| 12 | C | e9m98C7 | C:742-873 | RNA_pol_Rpb2_6 | 325 → 325.1 → 325.1.7 |
| 13 | D | e9m98D1 | D:1-426 | N-terminal domain in RNA-polymerase beta-prime subunit | 4246 → 4246.1 → 4246.1.1 |
| 14 | D | e9m98D2 | D:418-587 | double psi | 1 → 1.1 → 1.1.2 |
| 15 | D | e9m98D3 | D:573-731 | first helical domain in RNA-polymerase beta-prime subunit | 4959 → 4959.1 → 4959.1.1 |
| 16 | D | e9m98D4 | D:732-986 | second helical domain in RNA-polymerase beta-prime subunit | 4958 → 4958.1 → 4958.1.1 |
| 17 | D | e9m98D5 | D:968-1260 | central helical domain in RNA-polymerase beta-prime subunit | 4954 → 4954.1 → 4954.1.1 |
| 18 | E | e9m98E1 | E:1-76 | RNA polymerase omega subunit | 152 → 152.1 → 152.1.2 |
| 19 | M | e9m98M1 | M:1-54 | SH3 | 4 → 4.1 → 4.1.1 |
| 20 | M | e9m98M2 | M:55-159 | Three-helical HTH | 101 → 101.1 → 101.1.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors