PDB 9MLC
0 chains45 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
Chain Bview chain
7 domainse9mlcB1(B:182-334,B:351-355,B:373-380,B:531-666,B:672-673,B:677-685,B:730-736,B:751-757,B:786-793,B:811-816,B:965-968,B:997-1002,B:1007-1013,B:1022-1022,B:1036-1036)e9mlcB2(B:335-350,B:356-372,B:381-530)e9mlcB3(B:667-671,B:674-676,B:686-729,B:737-750,B:758-778)e9mlcB4(B:779-785,B:794-810,B:817-907)e9mlcB5(B:908-943,B:1069-1194)e9mlcB6(B:944-964,B:969-996,B:1003-1006,B:1014-1021,B:1023-1035,B:1037-1068)e9mlcB7(B:1195-1249)
Chain Cview chain
2 domainsChain Dview chain
1 domainChain Eview chain
2 domainsChain Fview chain
1 domainChain Gview chain
2 domainsChain Hview chain
1 domainChain Iview chain
2 domainsChain Jview chain
1 domainChain Kview chain
1 domainChain Lview chain
1 domainChain Mview chain
7 domainsChain Oview chain
1 domainChain Sview chain
2 domainsChain Wview chain
1 domainChain Xview chain
2 domainsChain Yview chain
1 domainAll Domains (45)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | B | e9mlcB1 | B:182-334,B:351-355,B:373-380,B:531-666,B:672-673,B:677-685,B:730-736,B:751-757,B:786-793,B:811-816,B:965-968,B:997-1002,B:1007-1013,B:1022-1022,B:1036-1036 | RNA_pol_Rpb2_1,RNA_pol_Rpb2_3 | 4010 → 4010.1 → 4010.1.1 |
| 2 | B | e9mlcB2 | B:335-350,B:356-372,B:381-530 | RNA_pol_Rpb2_2 | 4041 → 4041.1 → 4041.1.1 |
| 3 | B | e9mlcB3 | B:667-671,B:674-676,B:686-729,B:737-750,B:758-778 | RNA_pol_Rpb2_4 | 4961 → 4961.1 → 4961.1.1 |
| 4 | B | e9mlcB4 | B:779-785,B:794-810,B:817-907 | RNA_pol_Rpb2_6,RNA_pol_Rpb2_5 | 4042 → 4042.1 → 4042.1.1 |
| 5 | B | e9mlcB5 | B:908-943,B:1069-1194 | RNA_pol_Rpb2_6 | 1 → 1.1 → 1.1.2 |
| 6 | B | e9mlcB6 | B:944-964,B:969-996,B:1003-1006,B:1014-1021,B:1023-1035,B:1037-1068 | RNA_pol_Rpb2_6 | 1 → 1.1 → 1.1.2 |
| 7 | B | e9mlcB7 | B:1195-1249 | RNA_pol_Rpb2_7 | 4043 → 4043.1 → 4043.1.1 |
| 8 | C | e9mlcC1 | C:2-42,C:179-271 | RNA_pol_L | 305 → 305.1 → 305.1.1 |
| 9 | C | e9mlcC2 | C:43-178 | RNA_pol_A_bac | 240 → 240.2 → 240.2.1 |
| 10 | D | e9mlcD1 | D:60-180 | RNA_pol_Rpb4 | 102 → 102.1 → 102.1.1 |
| 11 | E | e9mlcE1 | E:139-210 | RNA_pol_Rpb5_C | 840 → 840.1 → 840.1.1 |
| 12 | E | e9mlcE2 | E:2-138 | RNA_pol_Rpb5_N | 2008 → 2008.3 → 2008.3.1 |
| 13 | F | e9mlcF1 | F:46-127 | RNA_pol_Rpb6 | 152 → 152.1 → 152.1.1 |
| 14 | G | e9mlcG1 | G:79-171 | S1 | 2 → 2.1 → 2.1.1 |
| 15 | G | e9mlcG2 | G:1-77 | SHS2_Rpb7-N | 872 → 872.1 → 872.1.1 |
| 16 | H | e9mlcH1 | H:1-150 | RNA_pol_Rpb8 | 2 → 2.1 → 2.1.1 |
| 17 | I | e9mlcI1 | I:1-59 | RNA_POL_M_15KD | 375 → 375.1 → 375.1.1 |
| 18 | I | e9mlcI2 | I:60-125 | TFIIS_C | 375 → 375.1 → 375.1.1 |
| 19 | J | e9mlcJ1 | J:1-67 | RNA_pol_N | 101 → 101.4 → 101.4.1 |
| 20 | K | e9mlcK1 | K:1-115 | RNA_pol_L_2 | 305 → 305.1 → 305.1.1 |
| 21 | L | e9mlcL1 | L:15-58 | DNA_RNApol_7kD | 375 → 375.1 → 375.1.1 |
| 22 | M | e9mlcM1 | M:515-756 | Tex_central_region | 4342 → 4342.1 → 4342.1.1 |
| 23 | M | e9mlcM2 | M:757-944 | YqgF | 2484 → 2484.1 → 2484.1.1 |
| 24 | M | e9mlcM3 | M:405-475 | 632.13.1.0 | 632 → 632.13 → 632.13.1 |
| 25 | M | e9mlcM4 | M:945-1042 | HHH_7 | 102 → 102.1 → 102.1.1 |
| 26 | M | e9mlcM5 | M:1043-1144 | HHH_9 | 102 → 102.1 → 102.1.1 |
| 27 | M | e9mlcM6 | M:284-332,M:355-404 | HTH_44 | 101 → 101.26 → 101.26.1 |
| 28 | M | e9mlcM7 | M:1145-1175,M:1226-1287 | Spt6_S1 | 2 → 2.1 → 2.1.1 |
| 29 | O | e9mlcO1 | O:20-83 | Elf1 | 375 → 375.1 → 375.1.1 |
| 30 | Q | e9mlcQ1 | Q:1-246,Q:391-393 | TPR_8, TPR_16, TPR_19 | 109 → 109.4 → 109.4.1 |
| 31 | Q | e9mlcQ2 | Q:306-390,Q:394-409 | TPR_2,TPR_8 | 109 → 109.4 → 109.4.1 |
| 32 | Q | e9mlcQ3 | Q:502-763 | TPR_8, TPR_16, TPR_19 | 109 → 109.4 → 109.4.1 |
| 33 | S | e9mlcS1 | S:240-301 | TFIIS_C | 375 → 375.1 → 375.1.1 |
| 34 | S | e9mlcS2 | S:132-239 | TFIIS_M | 103 → 103.4 → 103.4.1 |
| 35 | W | e9mlcW1 | W:5-304 | WD40, ANAPC4_WD40, Beta-prop_NOL10_N | 5 → 5.1 → 5.1.4 |
| 36 | X | e9mlcX1 | X:1-111 | CDC73_N | 101 → 101.46 → 101.46.1 |
| 37 | X | e9mlcX2 | X:358-523 | CDC73_C | 2004 → 2004.1 → 2004.1.1 |
| 38 | Y | e9mlcY1 | Y:2-117 | Spt4 | 375 → 375.1 → 375.1.1 |
| 39 | Z | e9mlcZ1 | Z:270-396 | KOW1_SPT5 | 4 → 4.1 → 4.1.1 |
| 40 | Z | e9mlcZ2 | Z:176-269 | Spt5-NGN | 304 → 304.17 → 304.17.1 |
| 41 | Z | e9mlcZ3 | Z:471-526 | KOW | 4 → 4.1 → 4.1.1 |
| 42 | Z | e9mlcZ4 | Z:416-470 | KOW2_Spt5 | 4 → 4.1 → 4.1.1 |
| 43 | Z | e9mlcZ5 | Z:581-646 | KOW4_SPT5 | 4 → 4.1 → 4.1.1 |
| 44 | Z | e9mlcZ6 | Z:703-754 | KOW5_SPT5 | 4 → 4.1 → 4.1.1 |
| 45 | Z | e9mlcZ7 | Z:527-580 | KOWx_SPT5 | 4 → 4.1 → 4.1.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors