PDB 9NDP
0 chains83 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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1 domainChain Iview chain
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1 domainChain QQview chain
2 domainsChain rview chain
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2 domainsChain UUview chain
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1 domainChain VVview chain
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3 domainsChain Xview chain
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1 domainAll Domains (83)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | 0 | e9ndp01 | 0:82-152 | Ribosomal_S27 | 375 → 375.1 → 375.1.1 |
| 2 | 6 | e9ndp61 | 6:2-314 | WD40 | 5 → 5.1 → 5.1.4 |
| 3 | 9 | e9ndp91 | 9:4-56 | Ribosomal_S14 | 377 → 377.1 → 377.1.1 |
| 4 | a | e9ndpa1 | a:2-148 | Ribosomal_L27A | 2490 → 2490.3 → 2490.3.1 |
| 5 | A | e9ndpA1 | A:2-96 | Ribosomal_L2 | 2 → 2.1 → 2.1.1 |
| 6 | A | e9ndpA2 | A:97-245 | Ribosomal_L2_C | 4 → 4.1 → 4.1.1 |
| 7 | AA | e9ndpAA1 | AA:75-133 | Ribosomal_S30 | 3168 → 3168.1 → 3168.1.1 |
| 8 | b | e9ndpb1 | b:2-117 | Ribosomal_L29e | 3212 → 3212.1 → 3212.1.1 |
| 9 | B | e9ndpB1 | B:2-395 | Ribosomal_L3 | 1 → 1.1 → 1.1.7 |
| 10 | BB | e9ndpBB1 | BB:108-193 | Ribosomal_S7e | 327 → 327.18 → 327.18.1 |
| 11 | BB | e9ndpBB2 | BB:5-107 | Ribosomal_S7e | 327 → 327.18 → 327.18.1 |
| 12 | c | e9ndpc1 | c:10-107 | Ribosomal_L7Ae | 301 → 301.1 → 301.1.1 |
| 13 | C | e9ndpC1 | C:2-272 | Ribosomal_L4 | 7559 → 7559.1 → 7559.1.1 |
| 14 | C | e9ndpC2 | C:273-363 | Ribos_L4_asso_C | 3319 → 3319.1 → 3319.1.1 |
| 15 | CC | e9ndpCC1 | CC:2-207 | Ribosomal_S8e | 3174 → 3174.1 → 3174.1.1 |
| 16 | d | e9ndpd1 | d:18-124 | Ribosomal_L31e | 259 → 259.1 → 259.1.1 |
| 17 | D | e9ndpD1 | D:3-295 | Ribosomal_L18_c,Ribosomal_L5e | 2484 → 2484.1 → 2484.1.1 |
| 18 | DD | e9ndpDD1 | DD:2-186 | Ribosomal_S4,S4 | 221 → 221.1 → 221.1.2 |
| 19 | e | e9ndpe1 | e:1-128 | Ribosomal_L32e | 2490 → 2490.1 → 2490.1.1 |
| 20 | E | e9ndpE1 | E:41-291 | Ribosomal_L6e,Ribosomal_L6e_N | 4 → 4.1 → 4.1.1 |
| 21 | EE | e9ndpEE1 | EE:2-153 | Ribosomal_S17,Ribosomal_S17_N | 2 → 2.1 → 2.1.1 |
| 22 | EF | e9ndpEF1 | EF:53-129 | NAC | 3124 → 3124.1 → 3124.1.1 |
| 23 | EG | e9ndpEG1 | EG:79-132 | NAC | 3124 → 3124.1 → 3124.1.1 |
| 24 | f | e9ndpf1 | f:2-110 | Ribosomal_L35Ae | 1 → 1.1 → 1.1.7 |
| 25 | F | e9ndpF1 | F:25-249 | Ribosomal_L30,Ribosomal_L30_N | 887 → 887.1 → 887.1.1 |
| 26 | FF | e9ndpFF1 | FF:5-68 | Ribosomal_S28e | 2 → 2.1 → 2.1.1 |
| 27 | g | e9ndpg1 | g:3-103 | Ribosomal_L34e | 377 → 377.12 → 377.12.1 |
| 28 | G | e9ndpG1 | G:80-319 | Ribosomal_L7Ae | 301 → 301.1 → 301.1.1 |
| 29 | GG | e9ndpGG1 | GG:18-118 | Ribosomal_S10 | 304 → 304.44 → 304.44.1 |
| 30 | h | e9ndph1 | h:2-123 | Ribosomal_L29 | 192 → 192.4 → 192.4.1 |
| 31 | H | e9ndpH1 | H:1-87 | Ribosomal_L6 | 318 → 318.1 → 318.1.1 |
| 32 | H | e9ndpH2 | H:88-190 | Ribosomal_L6 | 318 → 318.1 → 318.1.1 |
| 33 | i | e9ndpi1 | i:2-103 | Ribosomal_L36e | 3166 → 3166.1 → 3166.1.1 |
| 34 | I | e9ndpI1 | I:2-214 | Ribosomal_L16 | 325 → 325.1 → 325.1.5 |
| 35 | II | e9ndpII1 | II:6-142 | Ribosomal_S13 | 102 → 102.2 → 102.2.1 |
| 36 | j | e9ndpj1 | j:2-86 | Ribosomal_L37e | 375 → 375.1 → 375.1.1 |
| 37 | J | e9ndpJ1 | J:9-178 | Ribosomal_L5,Ribosomal_L5_C | 882 → 882.1 → 882.1.1 |
| 38 | JJ | e9ndpJJ1 | JJ:2-84 | Ribosomal_S27e | 375 → 375.1 → 375.1.1 |
| 39 | KK | e9ndpKK1 | KK:1-129 | Ribosomal_S17e | 101 → 101.1 → 101.1.17 |
| 40 | l | e9ndpl1 | l:2-51 | Ribosomal_L39 | 585 → 585.1 → 585.1.1 |
| 41 | L | e9ndpL1 | L:2-211 | Ribosomal_L13e | 3210 → 3210.1 → 3210.1.1 |
| 42 | LL | e9ndpLL1 | LL:2-102 | Ribosomal_S26e | 377 → 377.1 → 377.1.1 |
| 43 | m | e9ndpm1 | m:77-128 | Ribosomal_L40e | 375 → 375.1 → 375.1.1 |
| 44 | M | e9ndpM1 | M:2-139 | KOW,Ribosomal_L14e | 4 → 4.1 → 4.1.1 |
| 45 | MM | e9ndpMM1 | MM:16-151 | Ribosomal_S11 | 2484 → 2484.1 → 2484.1.1 |
| 46 | N | e9ndpN1 | N:2-204 | Ribosomal_L15e | 304 → 304.109 → 304.109.1 |
| 47 | NN | e9ndpNN1 | NN:4-125 | Ribosomal_S24e | 304 → 304.109 → 304.109.1 |
| 48 | o | e9ndpo1 | o:37-140 | Ribosomal_L44 | 375 → 375.1 → 375.1.1 |
| 49 | O | e9ndpO1 | O:5-203 | Ribosomal_L13 | 2490 → 2490.2 → 2490.2.1 |
| 50 | OO | e9ndpOO1 | OO:40-114 | Ribosomal_S25 | 101 → 101.1 → 101.1.2 |
| 51 | p | e9ndpp1 | p:2-92 | Ribosomal_L37ae | 375 → 375.1 → 375.1.1 |
| 52 | P | e9ndpP1 | P:2-154 | Ribosomal_L22 | 218 → 218.2 → 218.2.1 |
| 53 | PP | e9ndpPP1 | PP:3-143 | Ribosomal_S19e | 101 → 101.1 → 101.1.2 |
| 54 | q | e9ndpq1 | q:2-218 | Ribosomal_S2 | 2007 → 2007.6 → 2007.6.1 |
| 55 | e9ndpQQ1 | QQ:83-151 | Ribosomal_S15 | 616 → 616.1 → 616.1.1 | |
| 56 | e9ndpQQ2 | QQ:2-82 | Ribosomal_S13_N | 101 → 101.40 → 101.40.1 | |
| 57 | r | e9ndpr1 | r:2-125 | Ribosomal_L28e | 3209 → 3209.1 → 3209.1.1 |
| 58 | RR | e9ndpRR1 | RR:11-130 | Ribosomal_L7Ae | 301 → 301.1 → 301.1.1 |
| 59 | s | e9ndps1 | s:5-109,s:183-200 | Ribosomal_L10 | 304 → 304.60 → 304.60.1 |
| 60 | s | e9ndps2 | s:110-182 | RL10P_insert | 3310 → 3310.1 → 3310.1.1 |
| 61 | SS | e9ndpSS1 | SS:2-95 | S10_plectin | 101 → 101.1 → 101.1.2 |
| 62 | t | e9ndpt1 | t:74-163 | Ribosomal_L11 | 101 → 101.1 → 101.1.16 |
| 63 | t | e9ndpt2 | t:1-73 | Ribosomal_L11_N | 3781 → 3781.1 → 3781.1.1 |
| 64 | T | e9ndpT1 | T:2-160 | Ribosomal_L21e | 4 → 4.1 → 4.1.1 |
| 65 | TT | e9ndpTT1 | TT:68-130 | Ribosomal_S8 | 4988 → 4988.1 → 4988.1.1 |
| 66 | TT | e9ndpTT2 | TT:2-67 | Ribosomal_S8 | 320 → 320.2 → 320.2.1 |
| 67 | u | e9ndpu1 | u:21-113 | Ribosomal_S3Ae | 239 → 239.5 → 239.5.1 |
| 68 | u | e9ndpu2 | u:114-233 | Ribosomal_S3Ae | 230 → 230.6 → 230.6.1 |
| 69 | UU | e9ndpUU1 | UU:6-146 | Ribosomal_S9 | 212 → 212.1 → 212.1.1 |
| 70 | V | e9ndpV1 | V:10-140 | Ribosomal_L14 | 3174 → 3174.1 → 3174.1.1 |
| 71 | VV | e9ndpVV1 | VV:7-140 | Ribosom_S12_S23 | 2 → 2.1 → 2.1.1 |
| 72 | w | e9ndpw1 | w:92-227 | Ribosomal_S3_C | 230 → 230.2 → 230.2.1 |
| 73 | w | e9ndpw2 | w:1-99 | KH_2 | 327 → 327.11 → 327.11.1 |
| 74 | W | e9ndpW1 | W:1-63 | Ribosomal_L24e | 377 → 377.1 → 377.1.1 |
| 75 | WW | e9ndpWW1 | WW:4-130 | Ribosomal_S19 | 838 → 838.1 → 838.1.1 |
| 76 | x | e9ndpx1 | x:2-116 | Ribosomal_S4e,RS4NT | 221 → 221.1 → 221.1.2 |
| 77 | x | e9ndpx2 | x:117-175 | Ribosomal_S4e | 2 → 2.1 → 2.1.1 |
| 78 | x | e9ndpx3 | x:176-263 | KOW,40S_S4_C | 4 → 4.1 → 4.1.1 |
| 79 | X | e9ndpX1 | X:39-156 | Ribosomal_L23,Ribosomal_L23eN | 304 → 304.109 → 304.109.1 |
| 80 | y | e9ndpy1 | y:14-204 | Ribosomal_S7 | 167 → 167.1 → 167.1.1 |
| 81 | Y | e9ndpY1 | Y:1-134 | KOW, Ribosomal_L26 | 4 → 4.1 → 4.1.1 |
| 82 | z | e9ndpz1 | z:1-237 | Ribosomal_S6e | 239 → 239.1 → 239.1.1 |
| 83 | Z | e9ndpZ1 | Z:2-136 | KOW,Ribosomal_L27e | 4 → 4.1 → 4.1.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors