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PDB 9NDP

0 chains83 ECOD domains
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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

All Domains (83)

#ChainDomain IDRangeFamilyClassification
10e9ndp010:82-152Ribosomal_S27375 → 375.1 → 375.1.1
26e9ndp616:2-314WD405 → 5.1 → 5.1.4
39e9ndp919:4-56Ribosomal_S14377 → 377.1 → 377.1.1
4ae9ndpa1a:2-148Ribosomal_L27A2490 → 2490.3 → 2490.3.1
5Ae9ndpA1A:2-96Ribosomal_L22 → 2.1 → 2.1.1
6Ae9ndpA2A:97-245Ribosomal_L2_C4 → 4.1 → 4.1.1
7AAe9ndpAA1AA:75-133Ribosomal_S303168 → 3168.1 → 3168.1.1
8be9ndpb1b:2-117Ribosomal_L29e3212 → 3212.1 → 3212.1.1
9Be9ndpB1B:2-395Ribosomal_L31 → 1.1 → 1.1.7
10BBe9ndpBB1BB:108-193Ribosomal_S7e327 → 327.18 → 327.18.1
11BBe9ndpBB2BB:5-107Ribosomal_S7e327 → 327.18 → 327.18.1
12ce9ndpc1c:10-107Ribosomal_L7Ae301 → 301.1 → 301.1.1
13Ce9ndpC1C:2-272Ribosomal_L47559 → 7559.1 → 7559.1.1
14Ce9ndpC2C:273-363Ribos_L4_asso_C3319 → 3319.1 → 3319.1.1
15CCe9ndpCC1CC:2-207Ribosomal_S8e3174 → 3174.1 → 3174.1.1
16de9ndpd1d:18-124Ribosomal_L31e259 → 259.1 → 259.1.1
17De9ndpD1D:3-295Ribosomal_L18_c,Ribosomal_L5e2484 → 2484.1 → 2484.1.1
18DDe9ndpDD1DD:2-186Ribosomal_S4,S4221 → 221.1 → 221.1.2
19ee9ndpe1e:1-128Ribosomal_L32e2490 → 2490.1 → 2490.1.1
20Ee9ndpE1E:41-291Ribosomal_L6e,Ribosomal_L6e_N4 → 4.1 → 4.1.1
21EEe9ndpEE1EE:2-153Ribosomal_S17,Ribosomal_S17_N2 → 2.1 → 2.1.1
22EFe9ndpEF1EF:53-129NAC3124 → 3124.1 → 3124.1.1
23EGe9ndpEG1EG:79-132NAC3124 → 3124.1 → 3124.1.1
24fe9ndpf1f:2-110Ribosomal_L35Ae1 → 1.1 → 1.1.7
25Fe9ndpF1F:25-249Ribosomal_L30,Ribosomal_L30_N887 → 887.1 → 887.1.1
26FFe9ndpFF1FF:5-68Ribosomal_S28e2 → 2.1 → 2.1.1
27ge9ndpg1g:3-103Ribosomal_L34e377 → 377.12 → 377.12.1
28Ge9ndpG1G:80-319Ribosomal_L7Ae301 → 301.1 → 301.1.1
29GGe9ndpGG1GG:18-118Ribosomal_S10304 → 304.44 → 304.44.1
30he9ndph1h:2-123Ribosomal_L29192 → 192.4 → 192.4.1
31He9ndpH1H:1-87Ribosomal_L6318 → 318.1 → 318.1.1
32He9ndpH2H:88-190Ribosomal_L6318 → 318.1 → 318.1.1
33ie9ndpi1i:2-103Ribosomal_L36e3166 → 3166.1 → 3166.1.1
34Ie9ndpI1I:2-214Ribosomal_L16325 → 325.1 → 325.1.5
35IIe9ndpII1II:6-142Ribosomal_S13102 → 102.2 → 102.2.1
36je9ndpj1j:2-86Ribosomal_L37e375 → 375.1 → 375.1.1
37Je9ndpJ1J:9-178Ribosomal_L5,Ribosomal_L5_C882 → 882.1 → 882.1.1
38JJe9ndpJJ1JJ:2-84Ribosomal_S27e375 → 375.1 → 375.1.1
39KKe9ndpKK1KK:1-129Ribosomal_S17e101 → 101.1 → 101.1.17
40le9ndpl1l:2-51Ribosomal_L39585 → 585.1 → 585.1.1
41Le9ndpL1L:2-211Ribosomal_L13e3210 → 3210.1 → 3210.1.1
42LLe9ndpLL1LL:2-102Ribosomal_S26e377 → 377.1 → 377.1.1
43me9ndpm1m:77-128Ribosomal_L40e375 → 375.1 → 375.1.1
44Me9ndpM1M:2-139KOW,Ribosomal_L14e4 → 4.1 → 4.1.1
45MMe9ndpMM1MM:16-151Ribosomal_S112484 → 2484.1 → 2484.1.1
46Ne9ndpN1N:2-204Ribosomal_L15e304 → 304.109 → 304.109.1
47NNe9ndpNN1NN:4-125Ribosomal_S24e304 → 304.109 → 304.109.1
48oe9ndpo1o:37-140Ribosomal_L44375 → 375.1 → 375.1.1
49Oe9ndpO1O:5-203Ribosomal_L132490 → 2490.2 → 2490.2.1
50OOe9ndpOO1OO:40-114Ribosomal_S25101 → 101.1 → 101.1.2
51pe9ndpp1p:2-92Ribosomal_L37ae375 → 375.1 → 375.1.1
52Pe9ndpP1P:2-154Ribosomal_L22218 → 218.2 → 218.2.1
53PPe9ndpPP1PP:3-143Ribosomal_S19e101 → 101.1 → 101.1.2
54qe9ndpq1q:2-218Ribosomal_S22007 → 2007.6 → 2007.6.1
55QQe9ndpQQ1QQ:83-151Ribosomal_S15616 → 616.1 → 616.1.1
56QQe9ndpQQ2QQ:2-82Ribosomal_S13_N101 → 101.40 → 101.40.1
57re9ndpr1r:2-125Ribosomal_L28e3209 → 3209.1 → 3209.1.1
58RRe9ndpRR1RR:11-130Ribosomal_L7Ae301 → 301.1 → 301.1.1
59se9ndps1s:5-109,s:183-200Ribosomal_L10304 → 304.60 → 304.60.1
60se9ndps2s:110-182RL10P_insert3310 → 3310.1 → 3310.1.1
61SSe9ndpSS1SS:2-95S10_plectin101 → 101.1 → 101.1.2
62te9ndpt1t:74-163Ribosomal_L11101 → 101.1 → 101.1.16
63te9ndpt2t:1-73Ribosomal_L11_N3781 → 3781.1 → 3781.1.1
64Te9ndpT1T:2-160Ribosomal_L21e4 → 4.1 → 4.1.1
65TTe9ndpTT1TT:68-130Ribosomal_S84988 → 4988.1 → 4988.1.1
66TTe9ndpTT2TT:2-67Ribosomal_S8320 → 320.2 → 320.2.1
67ue9ndpu1u:21-113Ribosomal_S3Ae239 → 239.5 → 239.5.1
68ue9ndpu2u:114-233Ribosomal_S3Ae230 → 230.6 → 230.6.1
69UUe9ndpUU1UU:6-146Ribosomal_S9212 → 212.1 → 212.1.1
70Ve9ndpV1V:10-140Ribosomal_L143174 → 3174.1 → 3174.1.1
71VVe9ndpVV1VV:7-140Ribosom_S12_S232 → 2.1 → 2.1.1
72we9ndpw1w:92-227Ribosomal_S3_C230 → 230.2 → 230.2.1
73we9ndpw2w:1-99KH_2327 → 327.11 → 327.11.1
74We9ndpW1W:1-63Ribosomal_L24e377 → 377.1 → 377.1.1
75WWe9ndpWW1WW:4-130Ribosomal_S19838 → 838.1 → 838.1.1
76xe9ndpx1x:2-116Ribosomal_S4e,RS4NT221 → 221.1 → 221.1.2
77xe9ndpx2x:117-175Ribosomal_S4e2 → 2.1 → 2.1.1
78xe9ndpx3x:176-263KOW,40S_S4_C4 → 4.1 → 4.1.1
79Xe9ndpX1X:39-156Ribosomal_L23,Ribosomal_L23eN304 → 304.109 → 304.109.1
80ye9ndpy1y:14-204Ribosomal_S7167 → 167.1 → 167.1.1
81Ye9ndpY1Y:1-134KOW, Ribosomal_L264 → 4.1 → 4.1.1
82ze9ndpz1z:1-237Ribosomal_S6e239 → 239.1 → 239.1.1
83Ze9ndpZ1Z:2-136KOW,Ribosomal_L27e4 → 4.1 → 4.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors