PDB 9PFV
0 chains21 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
Chain Cview chain
7 domainsChain Eview chain
1 domainAll Domains (21)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | A | e9pfvA1 | A:4-55,A:178-235 | RNA_pol_L | 305 → 305.1 → 305.1.1 |
| 2 | A | e9pfvA2 | A:236-330 | RNA_pol_A_CTD | 102 → 102.1 → 102.1.1 |
| 3 | A | e9pfvA3 | A:56-177 | RNA_pol_A_bac | 240 → 240.2 → 240.2.1 |
| 4 | B | e9pfvB1 | B:4-55,B:178-235 | RNA_pol_L | 305 → 305.1 → 305.1.1 |
| 5 | B | e9pfvB2 | B:236-330 | RNA_pol_A_CTD | 102 → 102.1 → 102.1.1 |
| 6 | B | e9pfvB3 | B:56-177 | RNA_pol_A_bac | 240 → 240.2 → 240.2.1 |
| 7 | C | e9pfvC1 | C:3-193 | RNA_pol_Rpb2_1,RNA_pol_Rpb2_3 | 4010 → 4010.1 → 4010.1.1 |
| 8 | C | e9pfvC2 | C:342-586 | RNA_pol_Rpb2_1,RNA_pol_Rpb2_3 | 4010 → 4010.1 → 4010.1.1 |
| 9 | C | e9pfvC3 | C:587-721 | RNA_pol_Rpb2_45 | 4042 → 4042.1 → 4042.1.1 |
| 10 | C | e9pfvC4 | C:722-796 | RNA_pol_Rpb2_6 | 325 → 325.1 → 325.1.7 |
| 11 | C | e9pfvC5 | C:832-1078 | RNA_pol_Rpb2_6 | 325 → 325.1 → 325.1.7 |
| 12 | C | e9pfvC6 | C:1066-1255 | RNA_pol_Rpb2_6 | 1 → 1.1 → 1.1.2 |
| 13 | C | e9pfvC7 | C:1256-1355 | RNA_pol_Rpb2_6,RNA_pol_Rpb2_7 | 4043 → 4043.1 → 4043.1.1 |
| 14 | D | e9pfvD1 | D:15-356 | RNA_pol_Rpb1_1 | 4246 → 4246.1 → 4246.1.1 |
| 15 | D | e9pfvD2 | D:347-568 | RNA_pol_Rpb1_2, RNA_pol_Rpb1_3 | 1 → 1.1 → 1.1.2 |
| 16 | D | e9pfvD3 | D:639-902 | RNA_pol_Rpb1_5,RNA_pol_Rpb1_4 | 4958 → 4958.1 → 4958.1.1 |
| 17 | D | e9pfvD4 | D:890-1380 | RNA_pol_Rpb1_5 | 4954 → 4954.1 → 4954.1.1 |
| 18 | E | e9pfvE1 | E:3-70 | RNA_pol_Rpb6 | 152 → 152.1 → 152.1.2 |
| 19 | F | e9pfvF1 | F:540-651 | Sigma70_r3,Sigma70_r4 | 101 → 101.1 → 101.1.1 |
| 20 | F | e9pfvF2 | F:109-170,F:235-485 | Sigma70_r1_2,Sigma70_r2,Sigma70_ner | 142 → 142.1 → 142.1.1 |
| 21 | F | e9pfvF3 | F:486-546 | Sigma70_r3 | 101 → 101.1 → 101.1.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors