Home/PDB

PDB 9PRD

0 chains84 ECOD domains
View in RCSB PDB

3D Structure(domains colored, ligands/nucleic acids shown)

Loading viewer...

Domains by Chain

All Domains (84)

#ChainDomain IDRangeFamilyClassification
10e9prd010:79-186Ribosomal_L32p375 → 375.1 → 375.1.1
21e9prd111:14-65Ribosomal_L33375 → 375.1 → 375.1.1
32e9prd212:50-92Ribosomal_L343074 → 3074.1 → 3074.1.1
43e9prd313:94-162Ribosomal_L35p4281 → 4281.1 → 4281.1.1
54e9prd414:67-102Ribosomal_L36919 → 919.1 → 919.1.1
65e9prd515:31-422PDCD92008 → 2008.1 → 2008.1.1
76e9prd616:27-79,6:99-380PBP11 → 11.1 → 11.1.7
87e9prd717:69-138TGS221 → 221.1 → 221.1.1
97e9prd727:36-68,7:139-322309.1.2.0309 → 309.1 → 309.1.2
108e9prd818:107-163MRP-L283864 → 3864.1 → 3864.1.1
119e9prd919:15-137MRP-L273865 → 3865.1 → 3865.1.1
12ae9prda1a:104-142MRP-S323905 → 3905.1 → 3905.1.1
13A0e9prdA01A0:3-217MRP-S344 → 4.27 → 4.27.1
14A1e9prdA11A1:52-323MRP-S28330 → 330.3 → 330.3.1
15A3e9prdA31A3:128-196COX24_C3970 → 3970.1 → 3970.1.1
16A4e9prdA41A4:244-376PPR_2, PPR_3, PPR_long109 → 109.4 → 109.4.1
17A4e9prdA42A4:442-639109.4.1.0109 → 109.4 → 109.4.1
18ABe9prdAB1AB:58-274Ribosomal_S22007 → 2007.6 → 2007.6.1
19ACe9prdAC1AC:36-167MRP-S24327 → 327.11 → 327.11.1
20ADe9prdAD1AD:88-215Ribosomal_uS5m_N3274 → 3274.1 → 3274.1.1
21ADe9prdAD2AD:216-286Ribosomal_S5330 → 330.1 → 330.1.1
22ADe9prdAD3AD:287-430Ribosomal_S5_C212 → 212.1 → 212.1.1
23AEe9prdAE1AE:2-123Ribosomal_S6304 → 304.12 → 304.12.1
24AFe9prdAF1AF:35-242Ribosomal_S7167 → 167.1 → 167.1.1
25AGe9prdAG1AG:71-176,AG:198-396Ribosomal_S9212 → 212.1 → 212.1.1
26AHe9prdAH1AH:61-182Ribosomal_S10304 → 304.44 → 304.44.1
27AIe9prdAI1AI:59-194Ribosomal_S112484 → 2484.1 → 2484.1.1
28AJe9prdAJ1AJ:31-138Ribosom_S12_S232 → 2.1 → 2.1.1
29AKe9prdAK1AK:28-128Ribosomal_S14377 → 377.1 → 377.1.1
30ALe9prdAL1AL:66-229Ribosomal_S15616 → 616.1 → 616.1.1
31AMe9prdAM1AM:10-125Ribosomal_S16837 → 837.1 → 837.1.1
32ANe9prdAN1AN:5-111Ribosomal_S172 → 2.1 → 2.1.1
33AOe9prdAO1AO:52-236Ribosomal_S18101 → 101.1 → 101.1.1
34APe9prdAP1AP:47-142Ribosomal_S18101 → 101.1 → 101.1.1
35ARe9prdAR1AR:67-308MRP-S223966 → 3966.1 → 3966.1.1
36ASe9prdAS1AS:2-127MRP-S23103 → 103.15 → 103.15.1
37ATe9prdAT1AT:2-163L51_S25_CI-B82485 → 2485.1 → 2485.1.1
38AUe9prdAU1AU:27-199MRP-S263967 → 3967.1 → 3967.1.1
39AVe9prdAV1AV:36-400MRP-S27109 → 109.4 → 109.4.1
40AWe9prdAW1AW:77-173MRP-S352 → 2.1 → 2.1.1
41AXe9prdAX1AX:51-195,AX:220-398DAP32004 → 2004.1 → 2004.1.1
42AYe9prdAY1AY:276-383MRP-S313968 → 3968.1 → 3968.1.1
43AZe9prdAZ1AZ:5-91MRP-S333969 → 3969.1 → 3969.1.1
44be9prdb1b:2-149L51_S25_CI-B82485 → 2485.1 → 2485.1.1
45ce9prdc1c:31-233RM44_endonuclase171 → 171.1 → 171.1.1
46ce9prdc2c:234-316DSRM_MRPL44330 → 330.1 → 330.1.1
47de9prdd1d:117-287Tim44243 → 243.1 → 243.1.1
48De9prdD1D:179-296Ribosomal_L2_C4 → 4.1 → 4.1.1
49De9prdD2D:61-178Ribosomal_L22 → 2.1 → 2.1.1
50ee9prde1e:145-278221.4.1.0221 → 221.4 → 221.4.1
51Ee9prdE1E:45-348Ribosomal_L31 → 1.1 → 1.1.7
52fe9prdf1f:48-190Ribosomal_S10304 → 304.44 → 304.44.1
53Fe9prdF1F:45-273Ribosomal_L47559 → 7559.1 → 7559.1.1
54ge9prdg1g:38-166Img2306 → 306.3 → 306.3.1
55he9prdh1h:56-131Ribosomal_L50132 → 132.1 → 132.1.1
56He9prdH1H:53-147Ribosomal_L9_N+bL9m_N4076 → 4076.1 → 4076.1.1
57ie9prdi1i:32-127MRP-L51192 → 192.26 → 192.26.1
58Ie9prdI1I:30-197Ribosomal_L10304 → 304.60 → 304.60.1
59je9prdj1j:24-108MRPL523906 → 3906.1 → 3906.1.1
60Je9prdJ1J:18-83Ribosomal_L11_N3781 → 3781.1 → 3781.1.1
61Je9prdJ2J:83-157Ribosomal_L11101 → 101.1 → 101.1.16
62Le9prdL1L:31-145Ribosomal_L143174 → 3174.1 → 3174.1.1
63me9prdm1m:34-78Mitoc_L554987 → 4987.1 → 4987.1.1
64Me9prdM1M:10-296Ribosomal_L27A, PF294712490 → 2490.3 → 2490.3.1
65Ne9prdN1N:47-251Ribosomal_L16325 → 325.1 → 325.1.5
66oe9prdo1o:9-102MRP-633907 → 3907.1 → 3907.1.1
67Oe9prdO1O:9-136Ribosomal_L17218 → 218.3 → 218.3.1
68pe9prdp1p:71-163RF-1330 → 330.3 → 330.3.1
69Pe9prdP1P:39-179Ribosomal_L18p2484 → 2484.1 → 2484.1.1
70qe9prdq1q:25-152CR6_interact3866 → 3866.1 → 3866.1.1
71Qe9prdQ1Q:74-292Ribosomal_L194 → 4.1 → 4.1.1
72re9prdr1r:35-196Ribosomal_S18101 → 101.1 → 101.1.1
73Re9prdR1R:10-124Ribosomal_L20143 → 143.2 → 143.2.1
74se9prds1s:41-119,s:140-430PDCD92008 → 2008.1 → 2008.1.1
75Se9prdS1S:49-204Ribosomal_L21p4186 → 4186.1 → 4186.1.1
76te9prdt1t:46-90Ribosomal_L12_N156 → 156.1 → 156.1.1
77Te9prdT1T:41-206Ribosomal_L22218 → 218.2 → 218.2.1
78ue9prdu1u:46-90Ribosomal_L12_N156 → 156.1 → 156.1.1
79Ue9prdU1U:2-112Ribosomal_L23304 → 304.109 → 304.109.1
80Ve9prdV1V:15-216KOW,ribosomal_L244 → 4.1 → 4.1.1
81We9prdW1W:42-148325.1.8.0325 → 325.1 → 325.1.8
82Xe9prdX1X:2-244Ribosomal_L284232 → 4232.1 → 4232.1.1
83Ye9prdY1Y:63-238MRP-L47192 → 192.4 → 192.4.1
84Ze9prdZ1Z:35-154Ribosomal_L30887 → 887.1 → 887.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors