PDB 9WMW
0 chains64 ECOD domains
3D Structure(domains colored, ligands/nucleic acids shown)
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Domains by Chain
Chain aview chain
1 domainChain Aview chain
9 domainsChain bview chain
1 domainChain Bview chain
7 domainsChain Cview chain
2 domainsChain Dview chain
1 domainChain eview chain
1 domainChain Eview chain
2 domainsChain fview chain
1 domainChain Fview chain
1 domainChain gview chain
1 domainChain Gview chain
2 domainsChain hview chain
1 domainChain Hview chain
1 domainChain Iview chain
2 domainsChain jview chain
3 domainsChain Jview chain
1 domainChain Kview chain
1 domainChain Lview chain
1 domainChain mview chain
9 domainse9wmwm1(m:287-390,m:401-407,m:445-446,m:520-530,m:603-621,m:816-817,m:1085-1090)e9wmwm2(m:384-400,m:408-444,m:447-519,m:531-541)e9wmwm3(m:542-594)e9wmwm4(m:595-602,m:622-815,m:818-846,m:850-852)e9wmwm5(m:847-849,m:853-1030)e9wmwm6(m:1031-1084,m:1091-1129)e9wmwm7(m:1130-1235)e9wmwm8(m:1284-1374)e9wmwm9(m:1375-1469)
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1 domainChain nview chain
1 domainChain qview chain
1 domainChain Vview chain
1 domainChain Wview chain
7 domainsChain xview chain
1 domainAll Domains (64)
| # | Chain | Domain ID | Range | Family | Classification |
|---|---|---|---|---|---|
| 1 | a | e9wmwa1 | a:60-134 | Histone | 148 → 148.1 → 148.1.1 |
| 2 | A | e9wmwA1 | A:2-342 | RNA_pol_Rpb1_1 | 4246 → 4246.1 → 4246.1.1 |
| 3 | A | e9wmwA2 | A:343-380,A:442-525 | RNA_pol_Rpb1_2 | 1 → 1.1 → 1.1.2 |
| 4 | A | e9wmwA3 | A:381-441 | RNA_pol_Rpb1_2 | 275 → 275.1 → 275.1.1 |
| 5 | A | e9wmwA4 | A:526-668 | RNA_pol_Rpb1_3 | 4959 → 4959.1 → 4959.1.1 |
| 6 | A | e9wmwA5 | A:669-877 | RNA_pol_Rpb1_5,RNA_pol_Rpb1_4 | 4958 → 4958.1 → 4958.1.1 |
| 7 | A | e9wmwA6 | A:878-1066 | RNA_pol_Rpb1_6 | 4957 → 4957.1 → 4957.1.1 |
| 8 | A | e9wmwA7 | A:1067-1109,A:1309-1455 | RNA_pol_Rpb1_5 | 4954 → 4954.1 → 4954.1.1 |
| 9 | A | e9wmwA8 | A:1110-1138,A:1258-1308 | 4956.1.1.0 | 4956 → 4956.1 → 4956.1.1 |
| 10 | A | e9wmwA9 | A:1139-1245 | RNA_pol_Rpb1_7 | 4955 → 4955.1 → 4955.1.1 |
| 11 | b | e9wmwb1 | b:20-102 | CENP-T_C | 148 → 148.1 → 148.1.1 |
| 12 | B | e9wmwB1 | B:9-194,B:220-274,B:461-597 | RNA_pol_Rpb2_1,RNA_pol_Rpb2_3 | 4010 → 4010.1 → 4010.1.1 |
| 13 | B | e9wmwB2 | B:275-460 | RNA_pol_Rpb2_2 | 4041 → 4041.1 → 4041.1.1 |
| 14 | B | e9wmwB3 | B:598-693 | RNA_pol_Rpb2_4 | 4961 → 4961.1 → 4961.1.1 |
| 15 | B | e9wmwB4 | B:694-879 | RNA_pol_Rpb2_6,RNA_pol_Rpb2_5 | 4042 → 4042.1 → 4042.1.1 |
| 16 | B | e9wmwB5 | B:880-916,B:1041-1163 | RNA_pol_Rpb2_6, RNA_pol_Rpb2_7 | 1 → 1.1 → 1.1.2 |
| 17 | B | e9wmwB6 | B:917-1040 | RNA_pol_Rpb2_6 | 325 → 325.1 → 325.1.7 |
| 18 | B | e9wmwB7 | B:1164-1222 | RNA_pol_Rpb2_7 | 4043 → 4043.1 → 4043.1.1 |
| 19 | C | e9wmwC1 | C:4-41,C:174-266 | RNA_pol_L | 305 → 305.1 → 305.1.1 |
| 20 | C | e9wmwC2 | C:42-173 | RNA_pol_A_bac | 240 → 240.2 → 240.2.1 |
| 21 | D | e9wmwD1 | D:3-184 | RNA_pol_Rpb4 | 102 → 102.1 → 102.1.1 |
| 22 | e | e9wmwe1 | e:59-135 | Histone | 148 → 148.1 → 148.1.1 |
| 23 | E | e9wmwE1 | E:2-142 | RNA_pol_Rpb5_N | 2008 → 2008.3 → 2008.3.1 |
| 24 | E | e9wmwE2 | E:143-214 | RNA_pol_Rpb5_C | 840 → 840.1 → 840.1.1 |
| 25 | f | e9wmwf1 | f:25-102 | CENP-T_C | 148 → 148.1 → 148.1.1 |
| 26 | F | e9wmwF1 | F:71-154 | RNA_pol_Rpb6 | 152 → 152.1 → 152.1.1 |
| 27 | g | e9wmwg1 | g:14-94 | Histone | 148 → 148.1 → 148.1.1 |
| 28 | G | e9wmwG1 | G:1-68 | SHS2_Rpb7-N | 872 → 872.1 → 872.1.1 |
| 29 | G | e9wmwG2 | G:69-171 | S1 | 2 → 2.1 → 2.1.1 |
| 30 | h | e9wmwh1 | h:36-128 | Histone | 148 → 148.1 → 148.1.1 |
| 31 | H | e9wmwH1 | H:3-145 | RNA_pol_Rpb8 | 2 → 2.1 → 2.1.1 |
| 32 | I | e9wmwI1 | I:3-51 | RNA_POL_M_15KD | 375 → 375.1 → 375.1.1 |
| 33 | I | e9wmwI2 | I:52-113 | TFIIS_C | 375 → 375.1 → 375.1.1 |
| 34 | j | e9wmwj1 | j:533-653,j:774-776,j:782-800 | SPT16 | 220 → 220.1 → 220.1.1 |
| 35 | j | e9wmwj2 | j:654-757,j:777-781,j:801-840 | PH_SPT16 | 220 → 220.1 → 220.1.1 |
| 36 | j | e9wmwj3 | j:841-938 | Rttp106-like_middle | 220 → 220.1 → 220.1.1 |
| 37 | J | e9wmwJ1 | J:1-67 | RNA_pol_N | 101 → 101.4 → 101.4.1 |
| 38 | k | e9wmwk1 | k:1-107 | POB3_N | 220 → 220.1 → 220.1.1 |
| 39 | k | e9wmwk2 | k:108-180 | SSrecog | 220 → 220.1 → 220.1.1 |
| 40 | k | e9wmwk3 | k:236-372 | PH1_SSRP1-like | 220 → 220.1 → 220.1.1 |
| 41 | k | e9wmwk4 | k:373-453 | Rttp106-like_middle | 220 → 220.1 → 220.1.1 |
| 42 | K | e9wmwK1 | K:1-113 | RNA_pol_L_2 | 305 → 305.1 → 305.1.1 |
| 43 | L | e9wmwL1 | L:28-72 | DNA_RNApol_7kD | 375 → 375.1 → 375.1.1 |
| 44 | m | e9wmwm1 | m:287-390,m:401-407,m:445-446,m:520-530,m:603-621,m:816-817,m:1085-1090 | HTH_44 | 101 → 101.26 → 101.26.1 |
| 45 | m | e9wmwm2 | m:384-400,m:408-444,m:447-519,m:531-541 | HTH_44 | 101 → 101.26 → 101.26.1 |
| 46 | m | e9wmwm3 | m:542-594 | 632.13.1.0 | 632 → 632.13 → 632.13.1 |
| 47 | m | e9wmwm4 | m:595-602,m:622-815,m:818-846,m:850-852 | YqgF | 4342 → 4342.1 → 4342.1.1 |
| 48 | m | e9wmwm5 | m:847-849,m:853-1030 | HHH_7, YqgF | 2484 → 2484.1 → 2484.1.1 |
| 49 | m | e9wmwm6 | m:1031-1084,m:1091-1129 | HHH_9 | 102 → 102.1 → 102.1.1 |
| 50 | m | e9wmwm7 | m:1130-1235 | Spt6_S1 | 102 → 102.1 → 102.1.1 |
| 51 | m | e9wmwm8 | m:1284-1374 | SH2_2 | 214 → 214.1 → 214.1.1 |
| 52 | m | e9wmwm9 | m:1375-1469 | SH2_2 | 214 → 214.1 → 214.1.1 |
| 53 | M | e9wmwM1 | M:15-78 | Elf1 | 375 → 375.1 → 375.1.1 |
| 54 | n | e9wmwn1 | n:152-290 | Med26 | 611 → 611.3 → 611.3.1 |
| 55 | q | e9wmwq1 | q:1-872 | TPR_16 | 109 → 109.4 → 109.4.1 |
| 56 | V | e9wmwV1 | V:8-113 | Spt4 | 375 → 375.1 → 375.1.1 |
| 57 | W | e9wmwW1 | W:213-324,W:514-518,W:643-644 | Spt5-NGN | 304 → 304.17 → 304.17.1 |
| 58 | W | e9wmwW2 | W:325-451,W:478-485,W:505-505 | KOW1_SPT5 | 4 → 4.1 → 4.1.1 |
| 59 | W | e9wmwW3 | W:478-504,W:506-513,W:519-533 | KOW2_Spt5 | 4 → 4.1 → 4.1.1 |
| 60 | W | e9wmwW4 | W:534-582 | KOW | 4 → 4.1 → 4.1.1 |
| 61 | W | e9wmwW5 | W:609-642,W:645-658 | KOWx_SPT5 | 4 → 4.1 → 4.1.1 |
| 62 | W | e9wmwW6 | W:659-753 | KOW4_SPT5 | 4 → 4.1 → 4.1.1 |
| 63 | W | e9wmwW7 | W:754-811 | KOW5_SPT5 | 4 → 4.1 → 4.1.1 |
| 64 | x | e9wmwx1 | x:236-394 | CDC73_C | 2004 → 2004.1 → 2004.1.1 |
Visualization Legend
ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors