E5D8F2
Genome polyprotein [Cleaved into: P1; Capsid protein VP0 (VP4-VP2); Capsid protein VP4 (P1A) (Virion protein 4); Capsid protein VP2 (P1B) (Virion protein 2); Capsid protein VP3 (P1C) (Virion protein 3); Capsid protein VP1 (P1D) (Virion protein 1); P2; Protease 2A (P2A) (EC 3.4.22.29) (Picornain 2A) (Protein 2A); Protein 2B (P2B); Protein 2C (P2C) (EC 3.6.1.15); P3; Protein 3AB; Protein 3A (P3A); Viral protein genome-linked (VPg) (Protein 3B) (P3B); Protein 3CD (EC 3.4.22.28); Protease 3C (EC 3.4.22.28) (Picornain 3C) (P3C); RNA-directed RNA polymerase (RdRp) (EC 2.7.7.48) (3D polymerase) (3Dpol) (Protein 3D) (3D)]
Domain Architecture(21 domains)
e5jzgB1(B:1-235)e5k0uB1(B:1-235)e5k0uD1(D:1-4,D:24-58)e5jzgC2(C:1-5,C:21-58)e5x45A1(A:1-136)e5x45B1(B:1-137)e5x45C1(C:1-137)e5x45D1(D:1-136)e6ppoB1(B:1-235)e6psfB1(B:1-235)e6ku8A1(A:4-180)e5k0uC1(C:11-265)e6ppoC1(C:13-265)e6psfC1(C:13-265)e5k0uA1(A:17-279)e6ppoA1(A:19-279)e6psfA1(A:19-279)e6ppoD1(D:28-57)e6psfD1(D:28-57)e5jzgA1(A:54-279)e5jzgC1(C:67-331)
3D Structure
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Domain Details
| # | Domain ID | Range | X-group | H-group | T-group | Family |
|---|---|---|---|---|---|---|
| 1 | e5jzgB1 | B:1-235 | 10 | 10.2 | 10.2.1 | 10.2.1.1(Rhv) |
| 2 | e5k0uB1 | B:1-235 | 10 | 10.2 | 10.2.1 | 10.2.1.1(Rhv) |
| 3 | e5k0uD1 | D:1-4,D:24-58 | 10 | 10.2 | 10.2.1 | 10.2.1.23(Pico_P1A) |
| 4 | e5jzgC2 | C:1-5,C:21-58 | 10 | 10.2 | 10.2.1 | 10.2.1.23(Pico_P1A) |
| 5 | e5x45A1 | A:1-136 | 1 | 1.1 | 1.1.5 | 1.1.5.5(Pico_P2A) |
| 6 | e5x45B1 | B:1-137 | 1 | 1.1 | 1.1.5 | 1.1.5.5(Pico_P2A) |
| 7 | e5x45C1 | C:1-137 | 1 | 1.1 | 1.1.5 | 1.1.5.5(Pico_P2A) |
| 8 | e5x45D1 | D:1-136 | 1 | 1.1 | 1.1.5 | 1.1.5.5(Pico_P2A) |
| 9 | e6ppoB1 | B:1-235 | 10 | 10.2 | 10.2.1 | 10.2.1.1(Rhv) |
| 10 | e6psfB1 | B:1-235 | 10 | 10.2 | 10.2.1 | 10.2.1.1(Rhv) |
| 11 | e6ku8A1 | A:4-180 | 1 | 1.1 | 1.1.17 | 1.1.17.2(Peptidase_C3) |
| 12 | e5k0uC1 | C:11-265 | 10 | 10.2 | 10.2.1 | 10.2.1.1(Rhv) |
| 13 | e6ppoC1 | C:13-265 | 10 | 10.2 | 10.2.1 | 10.2.1.1(Rhv) |
| 14 | e6psfC1 | C:13-265 | 10 | 10.2 | 10.2.1 | 10.2.1.1(Rhv) |
| 15 | e5k0uA1 | A:17-279 | 10 | 10.2 | 10.2.1 | 10.2.1.69(Rhv_5) |
| 16 | e6ppoA1 | A:19-279 | 10 | 10.2 | 10.2.1 | 10.2.1.69(Rhv_5) |
| 17 | e6psfA1 | A:19-279 | 10 | 10.2 | 10.2.1 | 10.2.1.69(Rhv_5) |
| 18 | e6ppoD1 | D:28-57 | 10 | 10.2 | 10.2.1 | 10.2.1.23(Pico_P1A) |
| 19 | e6psfD1 | D:28-57 | 10 | 10.2 | 10.2.1 | 10.2.1.23(Pico_P1A) |
| 20 | e5jzgA1 | A:54-279 | 10 | 10.2 | 10.2.1 | 10.2.1.69(Rhv_5) |
| 21 | e5jzgC1 | C:67-331 | 10 | 10.2 | 10.2.1 | 10.2.1.1(Rhv) |