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P04584

Gag-Pol polyprotein (Pr160Gag-Pol) [Cleaved into: Matrix protein p17 (MA); Capsid protein p24 (CA); Spacer peptide 1 (SP1) (p2); Nucleocapsid protein p7 (NC); Transframe peptide (TF); p6-pol (p6*); Protease (EC 3.4.23.47) (PR) (Retropepsin); Reverse transcriptase/ribonuclease H (EC 2.7.7.49) (EC 2.7.7.7) (EC 3.1.26.13) (Exoribonuclease H) (EC 3.1.13.2) (p66 RT); p51 RT; p15; Integrase (IN) (EC 2.7.7.-) (EC 3.1.-.-)]

UniProt

Domain Architecture(100 domains)

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e3ebzA1(A:1-99)e4upjA1(A:1-99)e1hsiA1(A:1-99)e1jldA1(A:1-99)e2mipC1(C:1-99)e3ec0A1(A:1-99)e2mipD1(D:1-99)e1jldB1(B:1-99)e1hshC1(C:1-99)e2hpeA1(A:1-99)e6upjB1(B:1-99)e1idaA1(A:1-99)e2hpeB1(B:1-99)e4upjB1(B:1-99)e1hsiB1(B:1-99)e1hiiB1(B:1-99)e6upjA1(A:1-99)e3upjA1(A:1-99)e5upjA1(A:1-99)e1hshA1(A:1-99)e1idaB1(B:1-99)e2mipB1(B:1-99)e2mipA1(A:1-99)e1ivpB1(B:1-99)e1idbB1(B:1-99)e2hpfB1(B:1-99)e1ivqA1(A:1-99)e1ivpA1(A:1-99)e1hiiA1(A:1-99)e1idbA1(A:1-99)e2hpfA1(A:1-99)e1hshB1(B:1-99)e3ecgA1(A:1-99)e1hshD1(D:1-99)e5upjB1(B:1-99)e1ivqB1(B:1-99)e1e0eA1(A:1-46)e1e0eB1(B:1-46)e3f9kB1(B:1-43)e3f9kF1(F:1-43)e3f9kJ1(J:1-43)e3f9kN1(N:1-43)e3f9kR1(R:1-43)e3f9kV1(V:1-43)e3f9kZ1(Z:1-43)e3f9kd1(d:1-43)e3f9kh1(h:1-43)e3f9kl1(l:1-43)e3f9kp1(p:1-43)e3f9kt1(t:1-43)e2k4eA1(A:2-135)e2k4hA1(A:2-135)e2k4iA1(A:2-135)e3upjB1(B:3-99)e1mu2A8(A:3-242)e3f9kA1(A:4-46)e3f9kE1(E:4-46)e3f9kI1(I:4-46)e3f9kM1(M:4-46)e3f9kQ1(Q:4-46)e3f9kU1(U:4-46)e3f9kY1(Y:4-46)e3f9kc1(c:4-46)e3f9kg1(g:4-46)e3f9kk1(k:4-46)e3f9ko1(o:4-46)e3f9ks1(s:4-46)e1mu2B2(B:6-241)e3f9kA2(A:47-207)e3f9kE2(E:47-207)e3f9kI2(I:47-207)e3f9kM2(M:47-207)e3f9kQ2(Q:47-207)e3f9kU2(U:47-207)e3f9kY2(Y:47-207)e3f9kc2(c:47-207)e3f9kg2(g:47-207)e3f9kk2(k:47-207)e3f9ko2(o:47-207)e3f9ks2(s:47-207)e3f9kB2(B:54-206)e3f9kF2(F:54-206)e3f9kJ2(J:54-206)e3f9kN2(N:54-206)e3f9kR2(R:54-206)e3f9kV2(V:54-206)e3f9kZ2(Z:54-206)e3f9kd2(d:54-206)e3f9kh2(h:54-206)e3f9kl2(l:54-206)e3f9kp2(p:54-206)e3f9kt2(t:54-206)e3ec0B1(B:101-199)e3ecgB1(B:101-199)e3ebzB1(B:101-199)e1mu2B1(B:242-315)e1mu2A7(A:243-316)e1mu2B3(B:316-426)e1mu2A6(A:317-427)e1mu2A3(A:430-555)Unclassified

3D Structure

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Domain Details

#Domain IDRangeX-groupH-groupT-groupFamily
1e3ebzA1A:1-9911.11.1.1
1.1.1.3(RVP)
2e4upjA1A:1-9911.11.1.1
1.1.1.3(RVP)
3e1hsiA1A:1-9911.11.1.1
1.1.1.3(RVP)
4e1jldA1A:1-9911.11.1.1
1.1.1.3(RVP)
5e2mipC1C:1-9911.11.1.1
1.1.1.3(RVP)
6e3ec0A1A:1-9911.11.1.1
1.1.1.3(RVP)
7e2mipD1D:1-9911.11.1.1
1.1.1.3(RVP)
8e1jldB1B:1-9911.11.1.1
1.1.1.3(RVP)
9e1hshC1C:1-9911.11.1.1
1.1.1.3(RVP)
10e2hpeA1A:1-9911.11.1.1
1.1.1.3(RVP)
11e6upjB1B:1-9911.11.1.1
1.1.1.3(RVP)
12e1idaA1A:1-9911.11.1.1
1.1.1.3(RVP)
13e2hpeB1B:1-9911.11.1.1
1.1.1.3(RVP)
14e4upjB1B:1-9911.11.1.1
1.1.1.3(RVP)
15e1hsiB1B:1-9911.11.1.1
1.1.1.3(RVP)
16e1hiiB1B:1-9911.11.1.1
1.1.1.3(RVP)
17e6upjA1A:1-9911.11.1.1
1.1.1.3(RVP)
18e3upjA1A:1-9911.11.1.1
1.1.1.3(RVP)
19e5upjA1A:1-9911.11.1.1
1.1.1.3(RVP)
20e1hshA1A:1-9911.11.1.1
1.1.1.3(RVP)
21e1idaB1B:1-9911.11.1.1
1.1.1.3(RVP)
22e2mipB1B:1-9911.11.1.1
1.1.1.3(RVP)
23e2mipA1A:1-9911.11.1.1
1.1.1.3(RVP)
24e1ivpB1B:1-9911.11.1.1
1.1.1.3(RVP)
25e1idbB1B:1-9911.11.1.1
1.1.1.3(RVP)
26e2hpfB1B:1-9911.11.1.1
1.1.1.3(RVP)
27e1ivqA1A:1-9911.11.1.1
1.1.1.3(RVP)
28e1ivpA1A:1-9911.11.1.1
1.1.1.3(RVP)
29e1hiiA1A:1-9911.11.1.1
1.1.1.3(RVP)
30e1idbA1A:1-9911.11.1.1
1.1.1.3(RVP)
31e2hpfA1A:1-9911.11.1.1
1.1.1.3(RVP)
32e1hshB1B:1-9911.11.1.1
1.1.1.3(RVP)
33e3ecgA1A:1-9911.11.1.1
1.1.1.3(RVP)
34e1hshD1D:1-9911.11.1.1
1.1.1.3(RVP)
35e5upjB1B:1-9911.11.1.1
1.1.1.3(RVP)
36e1ivqB1B:1-9911.11.1.1
1.1.1.3(RVP)
37e1e0eA1A:1-46101101.1101.1.1
101.1.1.14(Integrase_Zn)
38e1e0eB1B:1-46101101.1101.1.1
101.1.1.14(Integrase_Zn)
39e3f9kB1B:1-43101101.1101.1.1
101.1.1.14(Integrase_Zn)
40e3f9kF1F:1-43101101.1101.1.1
101.1.1.14(Integrase_Zn)
41e3f9kJ1J:1-43101101.1101.1.1
101.1.1.14(Integrase_Zn)
42e3f9kN1N:1-43101101.1101.1.1
101.1.1.14(Integrase_Zn)
43e3f9kR1R:1-43101101.1101.1.1
101.1.1.14(Integrase_Zn)
44e3f9kV1V:1-43101101.1101.1.1
101.1.1.14(Integrase_Zn)
45e3f9kZ1Z:1-43101101.1101.1.1
101.1.1.14(Integrase_Zn)
46e3f9kd1d:1-43101101.1101.1.1
101.1.1.14(Integrase_Zn)
47e3f9kh1h:1-43101101.1101.1.1
101.1.1.14(Integrase_Zn)
48e3f9kl1l:1-43101101.1101.1.1
101.1.1.14(Integrase_Zn)
49e3f9kp1p:1-43101101.1101.1.1
101.1.1.14(Integrase_Zn)
50e3f9kt1t:1-43101101.1101.1.1
101.1.1.14(Integrase_Zn)
51e2k4eA1A:2-135612612.1612.1.1
612.1.1.1(Gag_p17)
52e2k4hA1A:2-135612612.1612.1.1
612.1.1.1(Gag_p17)
53e2k4iA1A:2-135612612.1612.1.1
612.1.1.1(Gag_p17)
54e3upjB1B:3-9911.11.1.1
1.1.1.3(RVP)
55e1mu2A8A:3-242304304.48304.48.1
304.48.1.1(RVT_1)
56e3f9kA1A:4-46101101.1101.1.1
101.1.1.14(Integrase_Zn)
57e3f9kE1E:4-46101101.1101.1.1
101.1.1.14(Integrase_Zn)
58e3f9kI1I:4-46101101.1101.1.1
101.1.1.14(Integrase_Zn)
59e3f9kM1M:4-46101101.1101.1.1
101.1.1.14(Integrase_Zn)
60e3f9kQ1Q:4-46101101.1101.1.1
101.1.1.14(Integrase_Zn)
61e3f9kU1U:4-46101101.1101.1.1
101.1.1.14(Integrase_Zn)
62e3f9kY1Y:4-46101101.1101.1.1
101.1.1.14(Integrase_Zn)
63e3f9kc1c:4-46101101.1101.1.1
101.1.1.14(Integrase_Zn)
64e3f9kg1g:4-46101101.1101.1.1
101.1.1.14(Integrase_Zn)
65e3f9kk1k:4-46101101.1101.1.1
101.1.1.14(Integrase_Zn)
66e3f9ko1o:4-46101101.1101.1.1
101.1.1.14(Integrase_Zn)
67e3f9ks1s:4-46101101.1101.1.1
101.1.1.14(Integrase_Zn)
68e1mu2B2B:6-241304304.48304.48.1
304.48.1.1(RVT_1)
69e3f9kA2A:47-20724842484.12484.1.1
70e3f9kE2E:47-20724842484.12484.1.1
71e3f9kI2I:47-20724842484.12484.1.1
72e3f9kM2M:47-20724842484.12484.1.1
73e3f9kQ2Q:47-20724842484.12484.1.1
74e3f9kU2U:47-20724842484.12484.1.1
75e3f9kY2Y:47-20724842484.12484.1.1
76e3f9kc2c:47-20724842484.12484.1.1
77e3f9kg2g:47-20724842484.12484.1.1
78e3f9kk2k:47-20724842484.12484.1.1
79e3f9ko2o:47-20724842484.12484.1.1
80e3f9ks2s:47-20724842484.12484.1.1
81e3f9kB2B:54-20624842484.12484.1.1
82e3f9kF2F:54-20624842484.12484.1.1
83e3f9kJ2J:54-20624842484.12484.1.1
84e3f9kN2N:54-20624842484.12484.1.1
85e3f9kR2R:54-20624842484.12484.1.1
86e3f9kV2V:54-20624842484.12484.1.1
87e3f9kZ2Z:54-20624842484.12484.1.1
88e3f9kd2d:54-20624842484.12484.1.1
89e3f9kh2h:54-20624842484.12484.1.1
90e3f9kl2l:54-20624842484.12484.1.1
91e3f9kp2p:54-20624842484.12484.1.1
92e3f9kt2t:54-20624842484.12484.1.1
93e3ec0B1B:101-19911.11.1.1
1.1.1.3(RVP)
94e3ecgB1B:101-19911.11.1.1
1.1.1.3(RVP)
95e3ebzB1B:101-19911.11.1.1
1.1.1.3(RVP)
96e1mu2B1B:242-31549674967.14967.1.1
97e1mu2A7A:243-31649674967.14967.1.1
4967.1.1.9(RVT_thumb)
98e1mu2B3B:316-42624842484.52484.5.1
2484.5.1.1(RVT_connect)
99e1mu2A6A:317-42724842484.52484.5.1
2484.5.1.1(RVT_connect)
100e1mu2A3A:430-55524842484.12484.1.1
2484.1.1.4(RNase_H)
View in UniProtView in AlphaFold DB